Wall clock time and date at job start Fri Apr 10 2020 17:59:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 H 1.09002 * 109.46796 * 2 1 4 4 N 1.46495 * 109.47188 * 119.99553 * 2 1 3 5 5 C 1.34774 * 120.00241 * 275.00248 * 4 2 1 6 6 O 1.21274 * 120.00233 * 359.97438 * 5 4 2 7 7 C 1.50705 * 120.00223 * 179.97438 * 5 4 2 8 8 H 1.09000 * 110.45299 * 61.14883 * 7 5 4 9 9 C 1.54510 * 110.50984 * 298.54868 * 7 5 4 10 10 C 1.54477 * 104.18108 * 241.14510 * 9 7 5 11 11 O 1.44642 * 104.69773 * 336.19290 * 10 9 7 12 12 C 1.44415 * 105.37338 * 40.34325 * 11 10 9 13 13 H 1.09003 * 110.37369 * 78.39849 * 12 11 10 14 14 C 1.52995 * 110.37805 * 200.73667 * 12 11 10 15 15 C 1.53008 * 117.49641 * 4.12742 * 14 12 11 16 16 C 1.53002 * 117.49775 * 295.47118 * 14 12 11 17 17 C 1.53000 * 109.47174 * 239.99643 * 2 1 3 18 18 C 1.53952 * 113.74215 * 158.74109 * 17 2 1 19 19 N 1.47813 * 86.03327 * 222.08770 * 18 17 2 20 20 C 1.36944 * 134.45314 * 204.64628 * 19 18 17 21 21 H 1.07997 * 119.99747 * 179.86696 * 20 19 18 22 22 C 1.38811 * 119.99589 * 359.86322 * 20 19 18 23 23 N 1.31614 * 120.00431 * 0.02562 * 22 20 19 24 24 Si 1.86808 * 119.99695 * 180.02562 * 22 20 19 25 25 H 1.48495 * 109.46865 * 0.02562 * 24 22 20 26 26 H 1.48501 * 109.46915 * 119.99986 * 24 22 20 27 27 H 1.48498 * 109.46847 * 239.99937 * 24 22 20 28 28 C 1.47575 * 91.05530 * 24.54894 * 19 18 17 29 29 H 1.09002 * 109.47689 * 180.02562 * 1 2 3 30 30 H 1.08997 * 109.47067 * 300.00269 * 1 2 3 31 31 H 1.09002 * 109.47487 * 60.00387 * 1 2 3 32 32 H 0.97008 * 119.99712 * 95.00044 * 4 2 1 33 33 H 1.09002 * 110.51305 * 359.86040 * 9 7 5 34 34 H 1.08994 * 110.51141 * 122.43370 * 9 7 5 35 35 H 1.09006 * 110.37498 * 94.92285 * 10 9 7 36 36 H 1.09000 * 110.37254 * 217.25804 * 10 9 7 37 37 H 1.09004 * 115.55369 * 149.79644 * 14 12 11 38 38 H 1.08995 * 117.49557 * 0.02562 * 15 14 12 39 39 H 1.09000 * 117.49474 * 145.01502 * 15 14 12 40 40 H 1.09005 * 117.49523 * 214.97653 * 16 14 12 41 41 H 1.08995 * 117.49781 * 359.97438 * 16 14 12 42 42 H 1.08994 * 112.94374 * 290.33777 * 17 2 1 43 43 H 1.09004 * 113.76475 * 336.34927 * 18 17 2 44 44 H 1.08994 * 113.76587 * 107.74697 * 18 17 2 45 45 H 0.97001 * 120.00489 * 179.97438 * 23 22 20 46 46 H 1.09002 * 113.77002 * 221.15123 * 28 19 18 47 47 H 1.09000 * 113.76705 * 89.75550 * 28 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8932 1.0277 0.0000 4 7 2.0183 -0.6905 1.1962 5 6 2.1470 -0.0181 2.3571 6 8 1.8590 1.1587 2.4115 7 6 2.6488 -0.7286 3.5878 8 1 3.6563 -1.1105 3.4229 9 6 1.6917 -1.8770 3.9780 10 6 1.1983 -1.4949 5.3911 11 8 2.2281 -0.6259 5.9168 12 6 2.6209 0.2151 4.8105 13 1 1.8903 1.0098 4.6598 14 6 4.0098 0.8071 5.0582 15 6 4.7556 0.3569 6.3161 16 6 4.1680 1.7682 6.2381 17 6 2.0400 -0.7213 -1.2492 18 6 3.4848 -0.3521 -1.6317 19 7 2.9978 -0.3178 -3.0268 20 6 3.5874 -0.4759 -4.2526 21 1 2.9927 -0.4039 -5.1512 22 6 4.9495 -0.7285 -4.3401 23 7 5.6742 -0.8166 -3.2450 24 14 5.7541 -0.9435 -6.0123 25 1 4.7291 -0.7986 -7.0770 26 1 6.8043 0.0907 -6.1929 27 1 6.3684 -2.2928 -6.0962 28 6 1.6213 -0.0473 -2.5684 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3633 0.5139 0.8899 31 1 -0.3634 0.5138 -0.8900 32 1 2.2490 -1.6317 1.1526 33 1 0.8542 -1.9294 3.2822 34 1 2.2255 -2.8270 4.0038 35 1 0.2486 -0.9634 5.3307 36 1 1.0968 -2.3855 6.0113 37 1 4.6029 1.0046 4.1651 38 1 4.2568 -0.3613 6.9669 39 1 5.8391 0.2585 6.2506 40 1 4.8653 2.5978 6.1214 41 1 3.2824 1.9791 6.8375 42 1 1.8527 -1.7948 -1.2262 43 1 3.8047 0.6190 -1.2540 44 1 4.2070 -1.1448 -1.4366 45 1 6.6260 -0.9935 -3.3061 46 1 0.8586 -0.5970 -3.1199 47 1 1.3927 1.0136 -2.4666 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000970192863.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 17:59:45 Heat of formation + Delta-G solvation = -7.663531 kcal Electronic energy + Delta-G solvation = -26060.844441 eV Core-core repulsion = 22439.081156 eV Total energy + Delta-G solvation = -3621.763285 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 308.189 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -40.68656 -39.08309 -37.90186 -36.54553 -34.82090 -32.83830 -32.05682 -30.20738 -29.34393 -27.54043 -25.13871 -24.42398 -23.77471 -22.66676 -22.37544 -21.23036 -20.47991 -20.12129 -19.01876 -17.31632 -16.83099 -16.65683 -16.19297 -15.44576 -15.39257 -15.11722 -14.90271 -14.56500 -13.96703 -13.86773 -13.83915 -13.44101 -13.14652 -12.76579 -12.45587 -12.29885 -11.98744 -11.72033 -11.63482 -11.55581 -11.54169 -11.32360 -11.31325 -11.15606 -10.92777 -10.73434 -10.39873 -10.37853 -10.29912 -9.99729 -9.85662 -9.77250 -9.56368 -9.39820 -8.83284 -8.81480 -6.88770 -5.78101 -3.10291 2.68661 3.18258 3.37594 3.42980 3.45511 3.62836 3.72708 4.25874 4.40715 4.43748 4.61056 4.70777 4.85343 4.89053 4.98782 5.09486 5.15281 5.21903 5.26650 5.27426 5.35086 5.44814 5.51684 5.59275 5.61486 5.62769 5.65850 5.77662 5.80630 5.86030 5.91861 6.00521 6.05700 6.15532 6.22232 6.33319 6.38129 6.56876 6.61274 6.64668 6.78321 7.21684 7.34533 7.54399 7.63453 7.96801 8.31594 9.03459 9.69769 10.58840 11.39048 Molecular weight = 308.19amu Principal moments of inertia in cm(-1) A = 0.018797 B = 0.003024 C = 0.002779 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1489.209058 B = 9257.576719 C =10072.156975 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C 0.150 3.850 3 H 0.087 0.913 4 N -0.715 5.715 5 C 0.522 3.478 6 O -0.540 6.540 7 C -0.140 4.140 8 H 0.113 0.887 9 C -0.147 4.147 10 C 0.047 3.953 11 O -0.369 6.369 12 C 0.123 3.877 13 H 0.092 0.908 14 C -0.152 4.152 15 C -0.167 4.167 16 C -0.174 4.174 17 C -0.146 4.146 18 C 0.171 3.829 19 N -0.613 5.613 20 C -0.222 4.222 21 H 0.080 0.920 22 C -0.009 4.009 23 N -0.921 5.921 24 Si 0.911 3.089 25 H -0.279 1.279 26 H -0.290 1.290 27 H -0.290 1.290 28 C 0.130 3.870 29 H 0.053 0.947 30 H 0.052 0.948 31 H 0.067 0.933 32 H 0.400 0.600 33 H 0.082 0.918 34 H 0.086 0.914 35 H 0.060 0.940 36 H 0.094 0.906 37 H 0.115 0.885 38 H 0.104 0.896 39 H 0.091 0.909 40 H 0.093 0.907 41 H 0.094 0.906 42 H 0.087 0.913 43 H 0.026 0.974 44 H 0.071 0.929 45 H 0.253 0.747 46 H 0.044 0.956 47 H 0.035 0.965 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.441 -2.434 18.658 20.622 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.216 4.216 2 C 0.045 3.955 3 H 0.105 0.895 4 N -0.365 5.365 5 C 0.308 3.692 6 O -0.417 6.417 7 C -0.162 4.162 8 H 0.131 0.869 9 C -0.185 4.185 10 C -0.030 4.030 11 O -0.288 6.288 12 C 0.065 3.935 13 H 0.110 0.890 14 C -0.170 4.170 15 C -0.204 4.204 16 C -0.211 4.211 17 C -0.166 4.166 18 C 0.045 3.955 19 N -0.339 5.339 20 C -0.350 4.350 21 H 0.098 0.902 22 C -0.205 4.205 23 N -0.569 5.569 24 Si 0.742 3.258 25 H -0.205 1.205 26 H -0.217 1.217 27 H -0.217 1.217 28 C 0.003 3.997 29 H 0.072 0.928 30 H 0.071 0.929 31 H 0.086 0.914 32 H 0.234 0.766 33 H 0.101 0.899 34 H 0.105 0.895 35 H 0.079 0.921 36 H 0.112 0.888 37 H 0.133 0.867 38 H 0.122 0.878 39 H 0.109 0.891 40 H 0.112 0.888 41 H 0.113 0.887 42 H 0.106 0.894 43 H 0.043 0.957 44 H 0.089 0.911 45 H 0.063 0.937 46 H 0.062 0.938 47 H 0.052 0.948 Dipole moment (debyes) X Y Z Total from point charges -8.298 -1.631 18.653 20.480 hybrid contribution 0.641 -0.519 -1.298 1.538 sum -7.657 -2.151 17.355 19.090 Atomic orbital electron populations 1.22125 0.95724 1.01674 1.02080 1.21104 0.93423 0.97606 0.83369 0.89485 1.46093 1.66696 1.14103 1.09577 1.20202 0.77529 0.87149 0.84344 1.90692 1.50288 1.15811 1.84923 1.22703 1.02091 0.96932 0.94436 0.86886 1.22953 0.99341 0.98314 0.97872 1.23402 0.91532 0.94359 0.93686 1.89130 1.55555 1.50975 1.33146 1.22304 0.95705 0.92226 0.83272 0.89040 1.22288 0.96185 1.04509 0.94051 1.22898 0.99241 0.97939 1.00340 1.22932 1.03315 0.93428 1.01405 1.23817 1.00929 0.99610 0.92288 1.22293 0.91363 0.98477 0.83326 1.46009 1.03297 1.82593 1.02022 1.19080 0.91459 1.41477 0.82990 0.90220 1.24780 0.96039 1.02399 0.97277 1.69822 1.06034 1.55285 1.25719 0.86058 0.79318 0.77385 0.83079 1.20464 1.21741 1.21703 1.22490 0.89659 0.96610 0.90891 0.92780 0.92859 0.91410 0.76625 0.89914 0.89537 0.92136 0.88786 0.86662 0.87785 0.89100 0.88842 0.88742 0.89441 0.95659 0.91055 0.93729 0.93771 0.94774 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.02 9.31 37.16 0.35 -1.68 16 2 C 0.15 2.23 2.38 -67.93 -0.16 2.07 16 3 H 0.09 1.53 7.42 -51.93 -0.39 1.14 16 4 N -0.71 -9.16 4.97 -53.81 -0.27 -9.43 16 5 C 0.52 7.06 6.95 -10.98 -0.08 6.98 16 6 O -0.54 -9.23 15.16 5.56 0.08 -9.15 16 7 C -0.14 -1.49 3.04 -90.20 -0.27 -1.76 16 8 H 0.11 1.13 7.87 -51.93 -0.41 0.72 16 9 C -0.15 -1.19 6.66 -25.16 -0.17 -1.36 16 10 C 0.05 0.40 7.65 37.93 0.29 0.69 16 11 O -0.37 -4.07 9.78 -35.23 -0.34 -4.41 16 12 C 0.12 1.42 2.97 -25.96 -0.08 1.34 16 13 H 0.09 1.23 6.97 -51.93 -0.36 0.87 16 14 C -0.15 -1.71 5.60 -90.62 -0.51 -2.22 16 15 C -0.17 -1.67 9.89 -26.69 -0.26 -1.93 16 16 C -0.17 -1.78 10.25 -26.69 -0.27 -2.05 16 17 C -0.15 -2.55 3.47 -89.69 -0.31 -2.86 16 18 C 0.17 3.93 7.08 -2.83 -0.02 3.91 16 19 N -0.61 -15.64 3.70 -177.70 -0.66 -16.30 16 20 C -0.22 -6.25 10.70 -15.06 -0.16 -6.41 16 21 H 0.08 2.16 7.83 -52.49 -0.41 1.75 16 22 C -0.01 -0.24 5.50 -17.43 -0.10 -0.34 16 23 N -0.92 -27.27 11.39 55.49 0.63 -26.64 16 24 Si 0.91 22.14 29.55 -169.99 -5.02 17.11 16 25 H -0.28 -6.57 7.11 56.52 0.40 -6.17 16 26 H -0.29 -7.12 7.11 56.52 0.40 -6.72 16 27 H -0.29 -7.04 7.11 56.52 0.40 -6.64 16 28 C 0.13 2.58 7.64 -2.97 -0.02 2.56 16 29 H 0.05 0.62 8.14 -51.93 -0.42 0.20 16 30 H 0.05 0.70 8.14 -51.93 -0.42 0.28 16 31 H 0.07 0.85 7.52 -51.93 -0.39 0.46 16 32 H 0.40 4.29 8.59 -40.82 -0.35 3.94 16 33 H 0.08 0.64 7.68 -51.93 -0.40 0.24 16 34 H 0.09 0.58 8.14 -51.93 -0.42 0.15 16 35 H 0.06 0.50 8.14 -51.93 -0.42 0.07 16 36 H 0.09 0.61 8.14 -51.93 -0.42 0.19 16 37 H 0.12 1.35 8.13 -51.93 -0.42 0.93 16 38 H 0.10 1.07 7.07 -51.93 -0.37 0.70 16 39 H 0.09 0.81 8.14 -51.93 -0.42 0.39 16 40 H 0.09 0.87 8.14 -51.93 -0.42 0.44 16 41 H 0.09 0.96 8.14 -51.93 -0.42 0.54 16 42 H 0.09 1.45 8.14 -51.93 -0.42 1.03 16 43 H 0.03 0.62 7.99 -51.93 -0.41 0.21 16 44 H 0.07 1.81 7.16 -51.93 -0.37 1.43 16 45 H 0.25 7.24 8.31 -40.82 -0.34 6.90 16 46 H 0.04 0.82 8.14 -51.93 -0.42 0.40 16 47 H 0.03 0.67 8.10 -51.93 -0.42 0.25 16 LS Contribution 377.01 15.07 5.68 5.68 Total: -1.00 -32.75 377.01 -9.74 -42.49 By element: Atomic # 1 Polarization: 11.78 SS G_CDS: -8.07 Total: 3.71 kcal Atomic # 6 Polarization: -1.29 SS G_CDS: -1.78 Total: -3.07 kcal Atomic # 7 Polarization: -52.07 SS G_CDS: -0.29 Total: -52.36 kcal Atomic # 8 Polarization: -13.30 SS G_CDS: -0.26 Total: -13.56 kcal Atomic # 14 Polarization: 22.14 SS G_CDS: -5.02 Total: 17.11 kcal Total LS contribution 5.68 Total: 5.68 kcal Total: -32.75 -9.74 -42.49 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000970192863.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.822 kcal (2) G-P(sol) polarization free energy of solvation -32.747 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.075 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.738 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.485 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.664 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds