Wall clock time and date at job start Fri Apr 10 2020 18:08:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.36935 * 119.99987 * 2 1 4 4 H 1.08000 * 119.99677 * 203.47011 * 3 2 1 5 5 C 1.38807 * 119.99988 * 23.46675 * 3 2 1 6 6 N 1.31616 * 120.00140 * 14.51921 * 5 3 2 7 7 Si 1.86801 * 120.00024 * 194.52129 * 5 3 2 8 8 H 1.48497 * 109.47005 * 359.97438 * 7 5 3 9 9 H 1.48492 * 109.47436 * 120.00024 * 7 5 3 10 10 H 1.48501 * 109.47096 * 240.00093 * 7 5 3 11 11 C 1.46506 * 119.99797 * 180.27362 * 2 1 3 12 12 H 1.08997 * 110.63890 * 180.69978 * 11 2 1 13 13 C 1.55154 * 110.71950 * 57.56117 * 11 2 1 14 14 C 1.54911 * 101.57816 * 206.13380 * 13 11 2 15 15 N 1.47419 * 104.83418 * 37.00851 * 14 13 11 16 16 C 1.34782 * 125.64814 * 155.90603 * 15 14 13 17 17 O 1.21576 * 119.99780 * 179.97438 * 16 15 14 18 18 C 1.47659 * 120.00107 * 359.97438 * 16 15 14 19 19 N 1.31824 * 126.46050 * 359.68784 * 18 16 15 20 20 N 1.28475 * 110.13689 * 179.85578 * 19 18 16 21 21 C 1.46497 * 124.93460 * 180.13366 * 20 19 18 22 22 C 1.35644 * 110.12998 * 0.42050 * 20 19 18 23 23 C 1.35457 * 107.13014 * 359.74822 * 22 20 19 24 24 Cl 1.73602 * 127.23775 * 179.97438 * 23 22 20 25 25 C 1.47320 * 108.73861 * 335.71677 * 15 14 13 26 26 H 1.08999 * 109.47032 * 274.91572 * 1 2 3 27 27 H 1.08996 * 109.47334 * 34.92099 * 1 2 3 28 28 H 1.09004 * 109.46824 * 154.91603 * 1 2 3 29 29 H 0.97007 * 120.00165 * 179.97438 * 6 5 3 30 30 H 1.09001 * 111.00767 * 324.20404 * 13 11 2 31 31 H 1.08998 * 111.00594 * 88.02519 * 13 11 2 32 32 H 1.09009 * 110.36667 * 155.84899 * 14 13 11 33 33 H 1.08999 * 110.36559 * 278.05762 * 14 13 11 34 34 H 1.09002 * 109.47116 * 270.32755 * 21 20 19 35 35 H 1.08999 * 109.47652 * 30.32566 * 21 20 19 36 36 H 1.09004 * 109.47398 * 150.33199 * 21 20 19 37 37 H 1.08001 * 126.43451 * 179.72624 * 22 20 19 38 38 H 1.09001 * 110.06149 * 241.87474 * 25 15 14 39 39 H 1.08997 * 109.85432 * 120.60825 * 25 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1497 1.1859 0.0000 4 1 3.1627 1.2245 -0.3725 5 6 1.5417 2.3383 0.4787 6 7 0.4360 2.2532 1.1875 7 14 2.2929 4.0099 0.1169 8 1 3.5254 3.8340 -0.6925 9 1 1.3184 4.8377 -0.6380 10 1 2.6327 4.6868 1.3943 11 6 2.1975 -1.2688 -0.0061 12 1 3.2729 -1.0916 0.0072 13 6 1.7978 -2.1275 -1.2349 14 6 2.0902 -3.5596 -0.7218 15 7 1.7030 -3.5374 0.7004 16 6 1.3466 -4.6102 1.4344 17 8 1.0457 -4.4734 2.6044 18 6 1.3216 -5.9515 0.8176 19 7 1.6162 -6.2440 -0.4336 20 7 1.4933 -7.5072 -0.6333 21 6 1.7438 -8.1832 -1.9086 22 6 1.0920 -8.1231 0.5067 23 6 0.9708 -7.1649 1.4565 24 17 0.4864 -7.3798 3.1097 25 6 1.7743 -2.1492 1.1887 26 1 -0.3633 0.0881 1.0239 27 1 -0.3634 0.8426 -0.5883 28 1 -0.3633 -0.9308 -0.4357 29 1 0.0113 3.0586 1.5223 30 1 0.7405 -2.0050 -1.4700 31 1 2.4183 -1.8869 -2.0982 32 1 1.4897 -4.2880 -1.2671 33 1 3.1505 -3.7903 -0.8245 34 1 0.8242 -8.2081 -2.4933 35 1 2.5116 -7.6425 -2.4619 36 1 2.0817 -9.2021 -1.7195 37 1 0.9040 -9.1790 0.6332 38 1 2.5126 -2.0710 1.9867 39 1 0.7965 -1.8344 1.5532 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000971592531.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 18:08:00 Heat of formation + Delta-G solvation = 84.918512 kcal Electronic energy + Delta-G solvation = -23791.285600 eV Core-core repulsion = 20184.416649 eV Total energy + Delta-G solvation = -3606.868951 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 312.109 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -42.88632 -39.40648 -37.27752 -36.52823 -34.71764 -33.64562 -31.63609 -30.83693 -29.65552 -28.38463 -27.20455 -25.99164 -24.14231 -22.45539 -22.04246 -21.61312 -19.46527 -19.06589 -17.53132 -16.98714 -16.65391 -16.65017 -15.65846 -15.10039 -14.78788 -14.72371 -14.13582 -13.86883 -13.39398 -13.29451 -13.20981 -13.12650 -12.54462 -12.41275 -12.12828 -11.95693 -11.93983 -11.60782 -11.21898 -10.89238 -10.75303 -10.69281 -10.47566 -10.43539 -10.19938 -9.84328 -9.77636 -9.68635 -9.52410 -8.97571 -8.54495 -8.17546 -6.76173 -5.72662 -3.20369 1.40018 1.71247 1.74217 2.50611 3.27318 3.39161 3.46255 3.48312 3.52556 4.10882 4.37773 4.49260 4.59187 4.63733 4.90596 4.96943 5.14662 5.16079 5.35531 5.43426 5.63790 5.71890 5.75723 5.97189 6.00468 6.14358 6.34190 6.42179 6.48375 6.64428 6.75721 6.87970 6.94348 7.36007 7.52213 7.75371 7.81503 7.88084 8.38249 8.46420 9.21933 9.84900 10.34568 11.31587 Molecular weight = 312.11amu Principal moments of inertia in cm(-1) A = 0.025009 B = 0.003210 C = 0.002937 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1119.337925 B = 8721.844388 C = 9529.722014 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.159 3.841 2 N -0.585 5.585 3 C -0.261 4.261 4 H 0.071 0.929 5 C 0.005 3.995 6 N -0.902 5.902 7 Si 0.905 3.095 8 H -0.278 1.278 9 H -0.289 1.289 10 H -0.290 1.290 11 C 0.172 3.828 12 H 0.078 0.922 13 C -0.154 4.154 14 C 0.105 3.895 15 N -0.599 5.599 16 C 0.604 3.396 17 O -0.523 6.523 18 C 0.011 3.989 19 N -0.243 5.243 20 N -0.286 5.286 21 C 0.089 3.911 22 C -0.005 4.005 23 C -0.104 4.104 24 Cl -0.010 7.010 25 C 0.090 3.910 26 H 0.033 0.967 27 H 0.041 0.959 28 H 0.003 0.997 29 H 0.253 0.747 30 H 0.075 0.925 31 H 0.076 0.924 32 H 0.083 0.917 33 H 0.062 0.938 34 H 0.087 0.913 35 H 0.100 0.900 36 H 0.097 0.903 37 H 0.190 0.810 38 H 0.063 0.937 39 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.162 -24.289 -7.139 25.408 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 N -0.306 5.306 3 C -0.391 4.391 4 H 0.088 0.912 5 C -0.194 4.194 6 N -0.546 5.546 7 Si 0.735 3.265 8 H -0.203 1.203 9 H -0.216 1.216 10 H -0.217 1.217 11 C 0.062 3.938 12 H 0.097 0.903 13 C -0.194 4.194 14 C -0.018 4.018 15 N -0.332 5.332 16 C 0.389 3.611 17 O -0.397 6.397 18 C -0.150 4.150 19 N -0.079 5.079 20 N -0.074 5.074 21 C -0.051 4.051 22 C -0.149 4.149 23 C -0.141 4.141 24 Cl 0.019 6.981 25 C -0.034 4.034 26 H 0.051 0.949 27 H 0.060 0.940 28 H 0.021 0.979 29 H 0.063 0.937 30 H 0.093 0.907 31 H 0.095 0.905 32 H 0.101 0.899 33 H 0.081 0.919 34 H 0.106 0.894 35 H 0.119 0.881 36 H 0.116 0.884 37 H 0.207 0.793 38 H 0.081 0.919 39 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 2.184 -23.682 -7.374 24.899 hybrid contribution -0.009 0.375 0.686 0.781 sum 2.175 -23.307 -6.688 24.345 Atomic orbital electron populations 1.20789 0.82542 0.95613 0.99622 1.43918 1.01840 0.99917 1.84886 1.19251 0.98912 0.85261 1.35641 0.91172 1.25057 0.98039 0.98644 0.97678 1.70091 1.20609 1.27317 1.36539 0.86180 0.78475 0.84259 0.77571 1.20260 1.21616 1.21714 1.21376 0.96382 0.85854 0.90204 0.90338 1.23375 1.02623 0.93429 0.99960 1.22428 0.99854 0.98616 0.80910 1.48418 1.65106 1.07526 1.12167 1.16435 0.78438 0.81066 0.85185 1.90839 1.49173 1.84547 1.15152 1.21998 1.07624 0.95246 0.90133 1.73807 1.19519 0.96825 1.17730 1.45460 1.47159 1.04391 1.10368 1.22231 1.04226 0.97641 0.80999 1.22585 1.06655 0.99841 0.85831 1.20839 1.10601 0.93067 0.89625 1.98366 1.89838 1.96952 1.12934 1.22985 1.02650 0.78457 0.99326 0.94888 0.94050 0.97866 0.93687 0.90678 0.90538 0.89878 0.91947 0.89409 0.88118 0.88430 0.79276 0.91885 0.90628 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.16 3.93 7.64 59.85 0.46 4.38 16 2 N -0.59 -14.50 2.93 -171.39 -0.50 -15.00 16 3 C -0.26 -7.08 9.59 -15.06 -0.14 -7.23 16 4 H 0.07 1.85 7.86 -52.49 -0.41 1.43 16 5 C 0.00 0.14 5.07 -17.43 -0.09 0.05 16 6 N -0.90 -26.39 10.83 55.49 0.60 -25.79 16 7 Si 0.91 21.73 29.58 -169.99 -5.03 16.71 16 8 H -0.28 -6.46 7.11 56.52 0.40 -6.06 16 9 H -0.29 -6.98 7.11 56.52 0.40 -6.58 16 10 H -0.29 -7.05 7.11 56.52 0.40 -6.65 16 11 C 0.17 3.50 3.43 -66.09 -0.23 3.28 16 12 H 0.08 1.57 7.94 -51.93 -0.41 1.16 16 13 C -0.15 -2.56 6.60 -24.58 -0.16 -2.72 16 14 C 0.11 1.59 6.16 -2.53 -0.02 1.57 16 15 N -0.60 -10.84 3.33 -171.46 -0.57 -11.41 16 16 C 0.60 11.29 7.85 -12.41 -0.10 11.19 16 17 O -0.52 -11.25 16.20 5.30 0.09 -11.17 16 18 C 0.01 0.18 6.96 -82.76 -0.58 -0.40 16 19 N -0.24 -3.10 9.08 33.42 0.30 -2.80 16 20 N -0.29 -2.57 3.72 -67.94 -0.25 -2.82 16 21 C 0.09 0.31 11.32 59.85 0.68 0.99 16 22 C -0.01 -0.05 11.49 -16.86 -0.19 -0.24 16 23 C -0.10 -1.37 6.80 -39.31 -0.27 -1.64 16 24 Cl -0.01 -0.13 28.17 -51.86 -1.46 -1.59 16 25 C 0.09 1.83 6.53 -2.90 -0.02 1.81 16 26 H 0.03 0.90 7.26 -51.93 -0.38 0.52 16 27 H 0.04 1.09 7.40 -51.93 -0.38 0.70 16 28 H 0.00 0.06 6.30 -51.93 -0.33 -0.26 16 29 H 0.25 7.17 8.31 -40.82 -0.34 6.83 16 30 H 0.07 1.33 6.30 -51.93 -0.33 1.01 16 31 H 0.08 1.16 8.14 -51.93 -0.42 0.73 16 32 H 0.08 1.17 6.19 -51.92 -0.32 0.85 16 33 H 0.06 0.86 8.14 -51.93 -0.42 0.44 16 34 H 0.09 0.20 8.14 -51.93 -0.42 -0.22 16 35 H 0.10 0.31 8.14 -51.93 -0.42 -0.11 16 36 H 0.10 0.07 8.13 -51.93 -0.42 -0.35 16 37 H 0.19 0.91 8.06 -52.49 -0.42 0.48 16 38 H 0.06 1.31 8.14 -51.93 -0.42 0.89 16 39 H 0.08 1.74 6.95 -51.93 -0.36 1.38 16 LS Contribution 335.99 15.07 5.06 5.06 Total: -1.00 -34.15 335.99 -7.43 -41.58 By element: Atomic # 1 Polarization: 1.21 SS G_CDS: -5.02 Total: -3.81 kcal Atomic # 6 Polarization: 11.69 SS G_CDS: -0.66 Total: 11.03 kcal Atomic # 7 Polarization: -57.40 SS G_CDS: -0.42 Total: -57.82 kcal Atomic # 8 Polarization: -11.25 SS G_CDS: 0.09 Total: -11.17 kcal Atomic # 14 Polarization: 21.73 SS G_CDS: -5.03 Total: 16.71 kcal Atomic # 17 Polarization: -0.13 SS G_CDS: -1.46 Total: -1.59 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -34.15 -7.43 -41.58 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000971592531.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 126.498 kcal (2) G-P(sol) polarization free energy of solvation -34.145 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.352 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.434 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.579 kcal (6) G-S(sol) free energy of system = (1) + (5) 84.919 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds