Wall clock time and date at job start Fri Apr 10 2020 18:09:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 N 1.28429 * 125.18937 * 2 1 4 4 C 1.30842 * 110.98114 * 180.02562 * 3 2 1 5 5 C 1.39806 * 107.87578 * 359.77722 * 4 3 2 6 6 Cl 1.73604 * 127.33680 * 180.26443 * 5 4 3 7 7 C 1.36750 * 125.18435 * 180.02562 * 2 1 3 8 8 C 1.47037 * 126.90427 * 359.92336 * 7 2 1 9 9 O 1.21635 * 120.00350 * 269.24254 * 8 7 2 10 10 N 1.34780 * 119.99513 * 89.24441 * 8 7 2 11 11 C 1.46929 * 120.63244 * 354.70991 * 10 8 7 12 12 C 1.53191 * 108.77508 * 126.41532 * 11 10 8 13 13 C 1.53032 * 109.30989 * 54.63771 * 12 11 10 14 14 C 1.53040 * 109.53906 * 298.62969 * 13 12 11 15 15 H 1.08999 * 109.50138 * 301.38532 * 14 13 12 16 16 N 1.46504 * 109.50031 * 181.31602 * 14 13 12 17 17 C 1.36934 * 119.99865 * 154.99922 * 16 14 13 18 18 H 1.08004 * 120.00266 * 0.02562 * 17 16 14 19 19 C 1.38813 * 119.99921 * 180.02562 * 17 16 14 20 20 N 1.31620 * 120.00019 * 359.72616 * 19 17 16 21 21 Si 1.86798 * 120.00104 * 180.02562 * 19 17 16 22 22 H 1.48502 * 109.46907 * 60.00295 * 21 19 17 23 23 H 1.48506 * 109.47109 * 179.97438 * 21 19 17 24 24 H 1.48497 * 109.47227 * 300.00082 * 21 19 17 25 25 C 1.46925 * 120.62930 * 174.73548 * 10 8 7 26 26 H 1.08998 * 109.46784 * 274.89991 * 1 2 3 27 27 H 1.08997 * 109.46642 * 34.89527 * 1 2 3 28 28 H 1.08999 * 109.47313 * 154.89728 * 1 2 3 29 29 H 1.08000 * 126.06142 * 179.97438 * 4 3 2 30 30 H 1.09010 * 109.58349 * 6.62734 * 11 10 8 31 31 H 1.08998 * 109.58642 * 246.20548 * 11 10 8 32 32 H 1.08993 * 109.49565 * 294.68486 * 12 11 10 33 33 H 1.09000 * 109.49296 * 174.58888 * 12 11 10 34 34 H 1.09007 * 109.46131 * 178.61351 * 13 12 11 35 35 H 1.08994 * 109.45497 * 58.65092 * 13 12 11 36 36 H 0.97003 * 119.99888 * 335.00728 * 16 14 13 37 37 H 0.96999 * 120.00135 * 180.02562 * 20 19 17 38 38 H 1.08998 * 109.58400 * 113.79789 * 25 10 8 39 39 H 1.09001 * 109.58564 * 353.37263 * 25 10 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 7 2.2052 1.0496 0.0000 4 6 3.4736 0.7284 -0.0005 5 6 3.5630 -0.6668 0.0042 6 17 5.0078 -1.6292 0.0121 7 6 2.2530 -1.1177 -0.0005 8 6 1.8008 -2.5168 0.0004 9 8 1.6282 -3.0995 1.0541 10 7 1.5777 -3.1536 -1.1663 11 6 1.6695 -2.4316 -2.4427 12 6 2.6365 -3.1812 -3.3646 13 6 2.1835 -4.6369 -3.4971 14 6 2.2092 -5.3081 -2.1219 15 1 3.2174 -5.2571 -1.7109 16 7 1.8056 -6.7102 -2.2545 17 6 2.2192 -7.6320 -1.3303 18 1 2.8427 -7.3255 -0.5034 19 6 1.8372 -8.9606 -1.4561 20 7 1.0730 -9.3333 -2.4608 21 14 2.4009 -10.2181 -0.1950 22 1 1.9045 -9.8279 1.1491 23 1 1.8609 -11.5544 -0.5528 24 1 3.8848 -10.2715 -0.1783 25 6 1.2374 -4.5827 -1.1859 26 1 -0.3633 0.0878 1.0239 27 1 -0.3632 0.8429 -0.5879 28 1 -0.3634 -0.9306 -0.4360 29 1 4.3041 1.4187 -0.0011 30 1 2.0416 -1.4224 -2.2657 31 1 0.6847 -2.3840 -2.9072 32 1 3.6405 -3.1496 -2.9416 33 1 2.6404 -2.7104 -4.3477 34 1 2.8559 -5.1665 -4.1722 35 1 1.1700 -4.6668 -3.8969 36 1 1.2454 -6.9855 -2.9970 37 1 0.8057 -10.2616 -2.5486 38 1 0.2173 -4.7104 -1.5480 39 1 1.3242 -4.9929 -0.1797 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000999176614.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 18:09:45 Heat of formation + Delta-G solvation = 57.063147 kcal Electronic energy + Delta-G solvation = -24239.367471 eV Core-core repulsion = 20631.290620 eV Total energy + Delta-G solvation = -3608.076850 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 312.109 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -42.85833 -39.82968 -37.39226 -36.68429 -34.57052 -33.64208 -32.45132 -31.36588 -30.88296 -28.31840 -27.45733 -25.61993 -24.07304 -22.71046 -22.02819 -21.88084 -20.19607 -19.18824 -17.90238 -17.12364 -16.89906 -16.13980 -15.78764 -15.43010 -14.82002 -14.47455 -14.39677 -14.21438 -13.76759 -13.56763 -13.41576 -13.40571 -13.09762 -12.79957 -12.49116 -12.35570 -12.02554 -11.79887 -11.43186 -11.10532 -10.85553 -10.72048 -10.67941 -10.65359 -10.27007 -10.16683 -9.89991 -9.70291 -9.48573 -9.13587 -8.92438 -8.51421 -7.04788 -5.81684 -3.11858 1.27549 1.60253 2.21077 2.25210 2.62797 3.04116 3.44693 3.48515 3.50495 4.13491 4.22807 4.55448 4.72136 4.74426 4.82612 4.98731 5.02022 5.06532 5.12427 5.20914 5.41833 5.45026 5.54834 5.74680 5.81375 5.90580 5.96761 6.09851 6.13631 6.28182 6.30671 6.39065 6.58685 6.74966 6.91860 7.37559 7.63708 7.68837 8.03891 8.36267 9.48364 10.01124 10.36545 11.40336 Molecular weight = 312.11amu Principal moments of inertia in cm(-1) A = 0.018925 B = 0.003855 C = 0.003738 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1479.163567 B = 7262.456737 C = 7489.795944 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.087 3.913 2 N -0.269 5.269 3 N -0.275 5.275 4 C 0.024 3.976 5 C -0.120 4.120 6 Cl -0.016 7.016 7 C 0.003 3.997 8 C 0.582 3.418 9 O -0.515 6.515 10 N -0.588 5.588 11 C 0.107 3.893 12 C -0.129 4.129 13 C -0.126 4.126 14 C 0.168 3.832 15 H 0.053 0.947 16 N -0.717 5.717 17 C -0.246 4.246 18 H 0.072 0.928 19 C -0.008 4.008 20 N -0.932 5.932 21 Si 0.907 3.093 22 H -0.284 1.284 23 H -0.291 1.291 24 H -0.285 1.285 25 C 0.092 3.908 26 H 0.091 0.909 27 H 0.103 0.897 28 H 0.095 0.905 29 H 0.195 0.805 30 H 0.074 0.926 31 H 0.071 0.929 32 H 0.069 0.931 33 H 0.073 0.927 34 H 0.070 0.930 35 H 0.061 0.939 36 H 0.386 0.614 37 H 0.257 0.743 38 H 0.067 0.933 39 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.926 22.185 -0.783 22.218 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.052 4.052 2 N -0.057 5.057 3 N -0.106 5.106 4 C -0.154 4.154 5 C -0.158 4.158 6 Cl 0.012 6.988 7 C -0.128 4.128 8 C 0.365 3.635 9 O -0.389 6.389 10 N -0.321 5.321 11 C -0.016 4.016 12 C -0.167 4.167 13 C -0.164 4.164 14 C 0.057 3.943 15 H 0.071 0.929 16 N -0.357 5.357 17 C -0.376 4.376 18 H 0.090 0.910 19 C -0.204 4.204 20 N -0.580 5.580 21 Si 0.737 3.263 22 H -0.211 1.211 23 H -0.216 1.216 24 H -0.211 1.211 25 C -0.032 4.032 26 H 0.109 0.891 27 H 0.121 0.879 28 H 0.114 0.886 29 H 0.211 0.789 30 H 0.092 0.908 31 H 0.090 0.910 32 H 0.088 0.912 33 H 0.092 0.908 34 H 0.088 0.912 35 H 0.080 0.920 36 H 0.220 0.780 37 H 0.066 0.934 38 H 0.085 0.915 39 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 0.097 22.527 -0.086 22.527 hybrid contribution 0.748 -1.509 0.445 1.742 sum 0.844 21.018 0.359 21.038 Atomic orbital electron populations 1.22273 0.72187 1.05565 1.05224 1.45495 1.07660 1.01503 1.51041 1.73221 1.03274 1.13287 1.20793 1.23502 0.93877 0.92633 1.05429 1.21249 0.87489 0.92522 1.14570 1.98375 1.32901 1.70240 1.97236 1.21378 0.90903 0.89877 1.10608 1.16965 0.78394 0.83540 0.84591 1.90880 1.50587 1.66656 1.30767 1.48290 1.67085 1.11794 1.04939 1.21767 1.00246 0.95368 0.84196 1.21862 0.99407 0.96472 0.99007 1.21831 1.01665 0.94105 0.98817 1.20493 0.96148 0.85419 0.92247 0.92855 1.42367 1.61046 1.01120 1.31155 1.19228 1.25797 0.88528 1.04095 0.91047 1.24737 1.00138 0.97239 0.98332 1.69648 1.39940 1.16867 1.31512 0.86274 0.78250 0.80747 0.80988 1.21075 1.21649 1.21140 1.22973 1.00062 0.75963 1.04162 0.89083 0.87890 0.88604 0.78852 0.90786 0.91048 0.91212 0.90849 0.91170 0.91982 0.78009 0.93373 0.91495 0.88863 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.66 11.22 59.85 0.67 1.33 16 2 N -0.27 -3.04 3.75 -63.85 -0.24 -3.28 16 3 N -0.28 -3.13 11.89 30.61 0.36 -2.76 16 4 C 0.02 0.26 12.04 -17.39 -0.21 0.05 16 5 C -0.12 -1.54 6.89 -38.88 -0.27 -1.81 16 6 Cl -0.02 -0.21 29.24 -51.86 -1.52 -1.72 16 7 C 0.00 0.04 4.65 -82.00 -0.38 -0.34 16 8 C 0.58 9.36 6.79 -12.69 -0.09 9.27 16 9 O -0.51 -10.32 16.54 5.25 0.09 -10.24 16 10 N -0.59 -8.73 2.97 -174.18 -0.52 -9.25 16 11 C 0.11 1.23 6.35 -3.71 -0.02 1.21 16 12 C -0.13 -1.52 6.08 -26.62 -0.16 -1.69 16 13 C -0.13 -1.89 5.35 -26.69 -0.14 -2.03 16 14 C 0.17 3.22 2.92 -67.81 -0.20 3.03 16 15 H 0.05 1.11 8.08 -51.93 -0.42 0.69 16 16 N -0.72 -17.32 5.12 -53.31 -0.27 -17.59 16 17 C -0.25 -6.73 9.93 -15.06 -0.15 -6.88 16 18 H 0.07 1.95 7.83 -52.48 -0.41 1.54 16 19 C -0.01 -0.23 5.50 -17.43 -0.10 -0.33 16 20 N -0.93 -27.57 13.06 55.49 0.72 -26.85 16 21 Si 0.91 22.44 29.55 -169.99 -5.02 17.42 16 22 H -0.28 -7.00 7.11 56.52 0.40 -6.60 16 23 H -0.29 -7.21 7.11 56.52 0.40 -6.80 16 24 H -0.28 -6.96 7.11 56.52 0.40 -6.56 16 25 C 0.09 1.66 6.00 -3.71 -0.02 1.64 16 26 H 0.09 0.61 8.14 -51.93 -0.42 0.19 16 27 H 0.10 0.52 8.14 -51.93 -0.42 0.10 16 28 H 0.10 0.70 7.66 -51.93 -0.40 0.30 16 29 H 0.19 1.42 8.06 -52.49 -0.42 1.00 16 30 H 0.07 0.79 6.32 -51.92 -0.33 0.46 16 31 H 0.07 0.70 8.14 -51.93 -0.42 0.28 16 32 H 0.07 0.88 8.14 -51.93 -0.42 0.46 16 33 H 0.07 0.70 8.14 -51.93 -0.42 0.28 16 34 H 0.07 1.10 8.14 -51.93 -0.42 0.68 16 35 H 0.06 0.90 8.14 -51.93 -0.42 0.48 16 36 H 0.39 9.79 7.80 -40.82 -0.32 9.47 16 37 H 0.26 7.39 8.31 -40.82 -0.34 7.05 16 38 H 0.07 1.18 8.14 -51.93 -0.42 0.76 16 39 H 0.09 1.98 7.04 -51.93 -0.37 1.61 16 LS Contribution 343.41 15.07 5.18 5.18 Total: -1.00 -32.81 343.41 -7.47 -40.28 By element: Atomic # 1 Polarization: 10.55 SS G_CDS: -5.18 Total: 5.37 kcal Atomic # 6 Polarization: 4.51 SS G_CDS: -1.07 Total: 3.44 kcal Atomic # 7 Polarization: -59.78 SS G_CDS: 0.06 Total: -59.72 kcal Atomic # 8 Polarization: -10.32 SS G_CDS: 0.09 Total: -10.24 kcal Atomic # 14 Polarization: 22.44 SS G_CDS: -5.02 Total: 17.42 kcal Atomic # 17 Polarization: -0.21 SS G_CDS: -1.52 Total: -1.72 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -32.81 -7.47 -40.28 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000999176614.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 97.345 kcal (2) G-P(sol) polarization free energy of solvation -32.815 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 64.530 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.467 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.282 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.063 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds