Wall clock time and date at job start Fri Apr 10 2020 18:11:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 F 1.39899 * 109.47219 * 2 1 4 4 F 1.39901 * 109.47034 * 239.99783 * 2 1 3 5 5 C 1.53008 * 109.46744 * 119.99978 * 2 1 3 6 6 C 1.52998 * 109.46744 * 179.97438 * 5 2 1 7 7 S 1.81401 * 109.46866 * 179.97438 * 6 5 2 8 8 O 1.42102 * 110.54326 * 68.37579 * 7 6 5 9 9 O 1.42097 * 110.54474 * 291.62182 * 7 6 5 10 10 N 1.65608 * 104.44945 * 179.97438 * 7 6 5 11 11 C 1.47024 * 125.64877 * 269.69413 * 10 7 6 12 12 C 1.54331 * 107.26364 * 178.84832 * 11 10 7 13 13 C 1.55160 * 103.02384 * 338.13999 * 12 11 10 14 14 O 1.42903 * 111.03597 * 277.22196 * 13 12 11 15 15 C 1.50691 * 111.00605 * 153.38095 * 13 12 11 16 16 H 1.08004 * 120.00043 * 247.80321 * 15 13 12 17 17 C 1.37878 * 120.00112 * 67.80654 * 15 13 12 18 18 N 1.31513 * 120.00114 * 359.97438 * 17 15 13 19 19 Si 1.86808 * 120.00037 * 180.02562 * 17 15 13 20 20 H 1.48496 * 109.47252 * 59.99849 * 19 17 15 21 21 H 1.48503 * 109.46756 * 179.97438 * 19 17 15 22 22 H 1.48496 * 109.46826 * 299.99868 * 19 17 15 23 23 C 1.47422 * 125.64623 * 90.00003 * 10 7 6 24 24 H 1.09006 * 109.47089 * 300.00570 * 1 2 3 25 25 H 1.09007 * 109.47100 * 60.00089 * 1 2 3 26 26 H 1.08996 * 109.47800 * 180.02562 * 1 2 3 27 27 H 1.08993 * 109.47351 * 59.99852 * 5 2 1 28 28 H 1.08998 * 109.46530 * 299.99594 * 5 2 1 29 29 H 1.08996 * 109.47800 * 59.99786 * 6 5 2 30 30 H 1.09006 * 109.47089 * 299.99451 * 6 5 2 31 31 H 1.08997 * 109.87601 * 298.39193 * 11 10 7 32 32 H 1.08998 * 109.88005 * 59.55630 * 11 10 7 33 33 H 1.09000 * 110.85044 * 219.67309 * 12 11 10 34 34 H 1.09002 * 110.66906 * 96.52287 * 12 11 10 35 35 H 0.96701 * 113.99217 * 292.20914 * 14 13 12 36 36 H 0.96997 * 120.00635 * 180.02562 * 18 17 15 37 37 H 1.08998 * 110.36878 * 322.93017 * 23 10 7 38 38 H 1.08996 * 110.36781 * 85.25489 * 23 10 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 9 1.9963 1.3190 0.0000 4 9 1.9963 -0.6595 -1.1423 5 6 2.0399 -0.7213 1.2493 6 6 3.5699 -0.7219 1.2490 7 16 4.1745 -1.5763 2.7306 8 8 3.8778 -2.9643 2.6617 9 8 3.8789 -0.8211 3.8973 10 7 5.8242 -1.5052 2.6043 11 6 6.6774 -2.5066 1.9479 12 6 8.1336 -2.0063 2.0514 13 6 7.9641 -0.4796 2.2703 14 8 7.7689 0.1982 1.0275 15 6 9.1418 0.0934 3.0156 16 1 9.0147 0.4671 4.0209 17 6 10.3816 0.1405 2.4142 18 7 10.5364 -0.3150 1.1902 19 14 11.8417 0.8501 3.3384 20 1 12.0733 0.0639 4.5766 21 1 13.0506 0.7858 2.4783 22 1 11.5619 2.2642 3.6950 23 6 6.6811 -0.4303 3.1371 24 1 -0.3633 0.5139 0.8900 25 1 -0.3634 0.5139 -0.8900 26 1 -0.3634 -1.0276 0.0005 27 1 1.6766 -1.7489 1.2494 28 1 1.6766 -0.2073 2.1392 29 1 3.9337 0.3056 1.2487 30 1 3.9329 -1.2361 0.3590 31 1 6.5766 -3.4674 2.4528 32 1 6.3946 -2.6048 0.8999 33 1 8.6787 -2.2054 1.1288 34 1 8.6382 -2.4641 2.9023 35 1 8.5452 0.1938 0.4510 36 1 11.4087 -0.2822 0.7671 37 1 6.1881 0.5359 3.0303 38 1 6.9223 -0.6206 4.1828 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000601453083.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 18:11:43 Heat of formation + Delta-G solvation = -228.426275 kcal Electronic energy + Delta-G solvation = -25340.400655 eV Core-core repulsion = 21173.579912 eV Total energy + Delta-G solvation = -4166.820743 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 313.099 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -49.13397 -47.11007 -38.06190 -36.91264 -35.77810 -34.76335 -34.30049 -32.14799 -30.86504 -29.30067 -28.29065 -25.07229 -24.75367 -21.93135 -21.40511 -19.82298 -18.63174 -17.85443 -17.74308 -17.08245 -16.86414 -16.39030 -15.89996 -15.73833 -14.99135 -14.76619 -14.38970 -14.10182 -13.78546 -13.63355 -13.43996 -13.35240 -12.93826 -12.88217 -12.67638 -12.43008 -12.39622 -12.00599 -11.91301 -11.83752 -11.77545 -11.74639 -11.54908 -11.34300 -11.02575 -10.78374 -10.63624 -10.52830 -10.40569 -10.03862 -9.44091 -8.70836 -8.38369 -8.20485 -6.30749 -4.38467 0.40397 2.88865 3.21033 3.26136 3.29408 3.50279 3.77452 3.85702 4.07423 4.17898 4.23492 4.30929 4.65095 4.69805 4.95408 4.97195 5.14110 5.19266 5.38047 5.45667 5.48360 5.67739 5.84254 5.89763 6.01639 6.18551 6.34062 6.58579 6.76640 6.92305 7.02036 7.33405 7.34513 7.72987 7.99159 8.63445 9.30358 9.44964 10.76903 Molecular weight = 313.10amu Principal moments of inertia in cm(-1) A = 0.021565 B = 0.003889 C = 0.003631 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1298.063182 B = 7198.608807 C = 7708.545282 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.197 4.197 2 C 0.296 3.704 3 F -0.196 7.196 4 F -0.197 7.197 5 C -0.154 4.154 6 C -0.645 4.645 7 S 2.632 3.368 8 O -0.959 6.959 9 O -0.955 6.955 10 N -1.003 6.003 11 C 0.123 3.877 12 C -0.136 4.136 13 C 0.250 3.750 14 O -0.587 6.587 15 C -0.537 4.537 16 H 0.066 0.934 17 C 0.073 3.927 18 N -0.898 5.898 19 Si 0.904 3.096 20 H -0.275 1.275 21 H -0.286 1.286 22 H -0.275 1.275 23 C 0.136 3.864 24 H 0.092 0.908 25 H 0.084 0.916 26 H 0.091 0.909 27 H 0.108 0.892 28 H 0.108 0.892 29 H 0.142 0.858 30 H 0.139 0.861 31 H 0.058 0.942 32 H 0.053 0.947 33 H 0.081 0.919 34 H 0.067 0.933 35 H 0.386 0.614 36 H 0.270 0.730 37 H 0.066 0.934 38 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.614 -1.688 -2.483 15.900 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.254 4.254 2 C 0.259 3.741 3 F -0.177 7.177 4 F -0.179 7.179 5 C -0.193 4.193 6 C -0.772 4.772 7 S 2.725 3.275 8 O -0.950 6.950 9 O -0.945 6.945 10 N -0.842 5.842 11 C -0.002 4.002 12 C -0.175 4.175 13 C 0.208 3.792 14 O -0.397 6.397 15 C -0.576 4.576 16 H 0.084 0.916 17 C -0.130 4.130 18 N -0.538 5.538 19 Si 0.731 3.269 20 H -0.200 1.200 21 H -0.212 1.212 22 H -0.200 1.200 23 C 0.011 3.989 24 H 0.110 0.890 25 H 0.103 0.897 26 H 0.110 0.890 27 H 0.126 0.874 28 H 0.127 0.873 29 H 0.161 0.839 30 H 0.158 0.842 31 H 0.076 0.924 32 H 0.071 0.929 33 H 0.100 0.900 34 H 0.086 0.914 35 H 0.239 0.761 36 H 0.080 0.920 37 H 0.085 0.915 38 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -16.627 -2.012 -1.708 16.835 hybrid contribution 1.697 0.693 -0.681 1.956 sum -14.929 -1.319 -2.388 15.176 Atomic orbital electron populations 1.22809 0.91247 1.05693 1.05678 1.20903 0.93568 0.75886 0.83774 1.93035 1.90571 1.37294 1.96816 1.93023 1.90597 1.80913 1.53323 1.22381 0.93885 1.04083 0.98929 1.30770 1.03481 1.17499 1.25416 1.04314 0.72526 0.74638 0.76060 1.93562 1.83710 1.30190 1.87506 1.93579 1.83578 1.73919 1.43461 1.58403 1.21998 1.33361 1.70476 1.21808 0.92844 0.90087 0.95481 1.23189 0.91665 0.99916 1.02772 1.19610 0.89775 0.87360 0.82443 1.86045 1.43521 1.78861 1.31299 1.21485 0.93031 1.41651 1.01424 0.91610 1.24991 0.98955 0.94030 0.95009 1.69547 1.25010 1.46170 1.13050 0.86459 0.81021 0.79767 0.79620 1.20036 1.21154 1.20002 1.22170 0.91299 0.87840 0.97553 0.88956 0.89727 0.88995 0.87402 0.87328 0.83930 0.84245 0.92362 0.92882 0.90030 0.91389 0.76137 0.92019 0.91537 0.90645 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -1.33 9.38 37.16 0.35 -0.98 16 2 C 0.30 3.16 2.11 -26.73 -0.06 3.10 16 3 F -0.20 -2.53 16.54 2.25 0.04 -2.49 16 4 F -0.20 -2.48 16.54 2.25 0.04 -2.45 16 5 C -0.15 -1.61 4.81 -26.73 -0.13 -1.73 16 6 C -0.64 -8.47 5.93 37.16 0.22 -8.25 16 7 S 2.63 42.18 5.65 -107.50 -0.61 41.57 16 8 O -0.96 -16.91 17.60 -57.54 -1.01 -17.93 16 9 O -0.95 -17.39 17.61 -57.54 -1.01 -18.40 16 10 N -1.00 -18.54 3.62 -111.42 -0.40 -18.95 16 11 C 0.12 2.27 6.89 -3.06 -0.02 2.25 16 12 C -0.14 -2.89 5.64 -24.89 -0.14 -3.03 16 13 C 0.25 5.83 0.89 -89.62 -0.08 5.75 16 14 O -0.59 -14.28 13.18 -35.23 -0.46 -14.74 16 15 C -0.54 -13.63 8.25 -34.44 -0.28 -13.92 16 16 H 0.07 1.65 7.77 -52.48 -0.41 1.24 16 17 C 0.07 1.83 5.30 -17.82 -0.09 1.73 16 18 N -0.90 -22.77 10.78 55.43 0.60 -22.17 16 19 Si 0.90 19.88 29.54 -169.99 -5.02 14.86 16 20 H -0.27 -6.02 7.11 56.52 0.40 -5.62 16 21 H -0.29 -6.26 7.11 56.52 0.40 -5.86 16 22 H -0.27 -6.07 7.11 56.52 0.40 -5.67 16 23 C 0.14 2.82 6.06 -2.53 -0.02 2.80 16 24 H 0.09 0.48 8.14 -51.93 -0.42 0.06 16 25 H 0.08 0.53 8.14 -51.93 -0.42 0.11 16 26 H 0.09 0.47 8.14 -51.93 -0.42 0.05 16 27 H 0.11 0.91 8.14 -51.93 -0.42 0.48 16 28 H 0.11 0.94 8.14 -51.93 -0.42 0.51 16 29 H 0.14 1.92 7.80 -51.93 -0.41 1.51 16 30 H 0.14 1.77 7.80 -51.92 -0.41 1.37 16 31 H 0.06 1.00 8.14 -51.93 -0.42 0.58 16 32 H 0.05 0.90 8.14 -51.93 -0.42 0.48 16 33 H 0.08 1.81 7.85 -51.93 -0.41 1.40 16 34 H 0.07 1.46 8.03 -51.93 -0.42 1.04 16 35 H 0.39 9.66 6.93 45.56 0.32 9.98 16 36 H 0.27 6.59 8.31 -40.82 -0.34 6.25 16 37 H 0.07 1.33 8.14 -51.93 -0.42 0.91 16 38 H 0.08 1.54 8.01 -51.93 -0.42 1.12 16 LS Contribution 335.30 15.07 5.05 5.05 Total: -1.00 -30.27 335.30 -7.71 -37.97 By element: Atomic # 1 Polarization: 14.61 SS G_CDS: -4.66 Total: 9.95 kcal Atomic # 6 Polarization: -12.04 SS G_CDS: -0.25 Total: -12.29 kcal Atomic # 7 Polarization: -41.31 SS G_CDS: 0.19 Total: -41.12 kcal Atomic # 8 Polarization: -48.58 SS G_CDS: -2.49 Total: -51.07 kcal Atomic # 9 Polarization: -5.01 SS G_CDS: 0.07 Total: -4.94 kcal Atomic # 14 Polarization: 19.88 SS G_CDS: -5.02 Total: 14.86 kcal Atomic # 16 Polarization: 42.18 SS G_CDS: -0.61 Total: 41.57 kcal Total LS contribution 5.05 Total: 5.05 kcal Total: -30.27 -7.71 -37.97 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000601453083.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -190.451 kcal (2) G-P(sol) polarization free energy of solvation -30.267 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -220.719 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.707 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.975 kcal (6) G-S(sol) free energy of system = (1) + (5) -228.426 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds