Wall clock time and date at job start Fri Apr 10 2020 18:10:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.08998 * 109.47533 * 2 1 4 4 N 1.46500 * 109.47473 * 120.00128 * 2 1 3 5 5 C 1.34768 * 120.00056 * 275.00296 * 4 2 1 6 6 O 1.21571 * 120.00118 * 359.97438 * 5 4 2 7 7 C 1.47712 * 119.99934 * 179.97438 * 5 4 2 8 8 C 1.41507 * 126.51626 * 179.71323 * 7 5 4 9 9 C 1.35361 * 105.50305 * 179.90065 * 8 7 5 10 10 N 1.35040 * 107.22673 * 0.35484 * 9 8 7 11 11 C 1.46498 * 124.88320 * 179.76345 * 10 9 8 12 12 F 1.39902 * 109.47286 * 299.97530 * 11 10 9 13 13 F 1.39895 * 109.47520 * 59.97605 * 11 10 9 14 14 N 1.28464 * 110.23122 * 359.76470 * 10 9 8 15 15 C 1.53006 * 109.47127 * 240.00501 * 2 1 3 16 16 C 1.53951 * 113.74032 * 158.74104 * 15 2 1 17 17 N 1.47814 * 86.03241 * 222.08256 * 16 15 2 18 18 C 1.36936 * 134.45554 * 204.64600 * 17 16 15 19 19 H 1.08000 * 119.99930 * 179.86546 * 18 17 16 20 20 C 1.38813 * 120.00235 * 359.86773 * 18 17 16 21 21 N 1.31620 * 119.99768 * 359.97438 * 20 18 17 22 22 Si 1.86794 * 120.00507 * 180.02562 * 20 18 17 23 23 H 1.48507 * 109.47027 * 359.97438 * 22 20 18 24 24 H 1.48498 * 109.47478 * 119.99768 * 22 20 18 25 25 H 1.48503 * 109.47374 * 239.99813 * 22 20 18 26 26 C 1.47582 * 91.05472 * 24.54901 * 17 16 15 27 27 H 1.09002 * 109.47153 * 299.99629 * 1 2 3 28 28 H 1.09001 * 109.46832 * 179.97438 * 1 2 3 29 29 H 1.09004 * 109.47261 * 59.99801 * 1 2 3 30 30 H 0.97001 * 119.99547 * 95.00125 * 4 2 1 31 31 H 1.07995 * 127.25225 * 0.02562 * 8 7 5 32 32 H 1.08000 * 126.38986 * 180.08885 * 9 8 7 33 33 H 1.09003 * 109.47255 * 179.97438 * 11 10 9 34 34 H 1.08996 * 112.94085 * 290.33107 * 15 2 1 35 35 H 1.08995 * 113.76589 * 336.34430 * 16 15 2 36 36 H 1.08995 * 113.76867 * 107.74965 * 16 15 2 37 37 H 0.96994 * 120.00624 * 179.97438 * 21 20 18 38 38 H 1.08998 * 113.77067 * 221.15214 * 26 17 16 39 39 H 1.09004 * 113.87049 * 89.76457 * 26 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 7 2.0184 -0.6906 1.1961 5 6 2.1471 -0.0184 2.3570 6 8 1.8583 1.1613 2.4116 7 6 2.6390 -0.7149 3.5632 8 6 2.8315 -0.1459 4.8444 9 6 3.2877 -1.1545 5.6234 10 7 3.3685 -2.2554 4.8455 11 6 3.8250 -3.5710 5.3004 12 9 5.1386 -3.4716 5.7716 13 9 2.9932 -4.0229 6.3304 14 7 2.9875 -1.9831 3.6493 15 6 2.0400 -0.7212 -1.2494 16 6 3.4848 -0.3519 -1.6317 17 7 2.9978 -0.3175 -3.0269 18 6 3.5874 -0.4754 -4.2527 19 1 2.9926 -0.4035 -5.1513 20 6 4.9495 -0.7281 -4.3404 21 7 5.6744 -0.8154 -3.2453 22 14 5.7540 -0.9429 -6.0125 23 1 4.7288 -0.7991 -7.0772 24 1 6.8043 0.0913 -6.1931 25 1 6.3684 -2.2923 -6.0966 26 6 1.6213 -0.0470 -2.5685 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3634 0.5139 -0.8900 30 1 2.2491 -1.6318 1.1525 31 1 2.6505 0.8771 5.1393 32 1 3.5439 -1.0898 6.6706 33 1 3.7895 -4.2753 4.4693 34 1 1.8528 -1.7947 -1.2264 35 1 3.8046 0.6192 -1.2540 36 1 4.2071 -1.1446 -1.4368 37 1 6.6261 -0.9923 -3.3064 38 1 0.8586 -0.5967 -3.1200 39 1 1.3908 1.0134 -2.4661 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000969749802.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 18:10:36 Heat of formation + Delta-G solvation = 10.227762 kcal Electronic energy + Delta-G solvation = -25630.551737 eV Core-core repulsion = 21441.335794 eV Total energy + Delta-G solvation = -4189.215944 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 314.130 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -49.91651 -48.00156 -42.94244 -39.57786 -37.96676 -34.79757 -33.28462 -32.18706 -31.29136 -30.22082 -27.49982 -27.00657 -24.92919 -24.15527 -23.32853 -21.94818 -21.15174 -20.18262 -19.19177 -18.95079 -18.46581 -17.97605 -17.20411 -16.70454 -16.05248 -15.82946 -14.97117 -14.87478 -14.79508 -14.45418 -14.32141 -14.27527 -13.98649 -13.85734 -13.54298 -13.37942 -13.00797 -12.62939 -12.41096 -12.09969 -11.63935 -11.39005 -11.31479 -11.26682 -10.90322 -10.71602 -10.33327 -10.12476 -9.86027 -9.79767 -9.72584 -9.58613 -9.38899 -8.79554 -8.77773 -6.84655 -5.74187 -3.06357 1.15564 1.33030 1.81693 2.96063 3.21977 3.39077 3.40140 3.45358 3.47998 3.56333 4.02779 4.29640 4.37397 4.47122 4.85662 5.12553 5.28142 5.30176 5.31692 5.43408 5.56080 5.68505 5.82143 5.93424 5.99119 6.05748 6.11030 6.26932 6.38011 6.43401 6.60509 6.68093 6.81609 7.27007 7.30160 7.39774 7.59308 7.72009 8.00737 8.29847 9.07177 9.73505 10.63021 11.42930 Molecular weight = 314.13amu Principal moments of inertia in cm(-1) A = 0.015174 B = 0.002992 C = 0.002645 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1844.801394 B = 9354.954675 C =10582.075547 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C 0.150 3.850 3 H 0.090 0.910 4 N -0.700 5.700 5 C 0.602 3.398 6 O -0.531 6.531 7 C 0.018 3.982 8 C -0.168 4.168 9 C -0.004 4.004 10 N -0.349 5.349 11 C 0.497 3.503 12 F -0.174 7.174 13 F -0.175 7.175 14 N -0.248 5.248 15 C -0.147 4.147 16 C 0.170 3.830 17 N -0.613 5.613 18 C -0.222 4.222 19 H 0.080 0.920 20 C -0.009 4.009 21 N -0.921 5.921 22 Si 0.911 3.089 23 H -0.280 1.280 24 H -0.291 1.291 25 H -0.290 1.290 26 C 0.131 3.869 27 H 0.054 0.946 28 H 0.054 0.946 29 H 0.068 0.932 30 H 0.406 0.594 31 H 0.171 0.829 32 H 0.187 0.813 33 H 0.174 0.826 34 H 0.088 0.912 35 H 0.027 0.973 36 H 0.071 0.929 37 H 0.252 0.748 38 H 0.044 0.956 39 H 0.036 0.964 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.997 -5.562 20.435 22.305 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.217 4.217 2 C 0.045 3.955 3 H 0.108 0.892 4 N -0.350 5.350 5 C 0.385 3.615 6 O -0.406 6.406 7 C -0.146 4.146 8 C -0.195 4.195 9 C -0.144 4.144 10 N -0.146 5.146 11 C 0.363 3.637 12 F -0.155 7.155 13 F -0.157 7.157 14 N -0.080 5.080 15 C -0.167 4.167 16 C 0.045 3.955 17 N -0.339 5.339 18 C -0.349 4.349 19 H 0.098 0.902 20 C -0.205 4.205 21 N -0.568 5.568 22 Si 0.741 3.259 23 H -0.205 1.205 24 H -0.218 1.218 25 H -0.217 1.217 26 C 0.004 3.996 27 H 0.073 0.927 28 H 0.073 0.927 29 H 0.087 0.913 30 H 0.241 0.759 31 H 0.188 0.812 32 H 0.204 0.796 33 H 0.190 0.810 34 H 0.107 0.893 35 H 0.044 0.956 36 H 0.090 0.910 37 H 0.062 0.938 38 H 0.063 0.937 39 H 0.053 0.947 Dipole moment (debyes) X Y Z Total from point charges -6.786 -5.901 19.682 21.639 hybrid contribution 0.776 0.203 -0.097 0.808 sum -6.010 -5.697 19.585 21.263 Atomic orbital electron populations 1.22137 0.95476 1.01865 1.02207 1.21179 0.93615 0.97652 0.83041 0.89192 1.45968 1.65534 1.14450 1.09087 1.16792 0.77680 0.85694 0.81379 1.90803 1.50693 1.14699 1.84382 1.22320 1.05579 0.90149 0.96570 1.21918 1.05185 1.00980 0.91463 1.22980 1.05442 0.86382 0.99553 1.46501 1.50327 1.10035 1.07749 1.21194 0.72323 0.82687 0.87449 1.93164 1.36143 1.95894 1.90302 1.93150 1.72124 1.87820 1.62594 1.73515 1.15401 1.17881 1.01235 1.23827 1.00951 0.99717 0.92166 1.22303 0.91392 0.98553 0.83257 1.46006 1.03315 1.82586 1.02022 1.19076 0.91446 1.41422 0.82996 0.90223 1.24781 0.96055 1.02462 0.97232 1.69829 1.06008 1.55300 1.25694 0.86061 0.79315 0.77355 0.83122 1.20471 1.21773 1.21749 1.22488 0.89636 0.96643 0.90814 0.92673 0.92666 0.91263 0.75924 0.81200 0.79630 0.80959 0.89332 0.95555 0.91028 0.93752 0.93746 0.94693 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.11 9.31 37.16 0.35 -1.76 16 2 C 0.15 2.33 2.38 -67.93 -0.16 2.17 16 3 H 0.09 1.59 7.41 -51.93 -0.39 1.21 16 4 N -0.70 -10.17 5.07 -54.79 -0.28 -10.44 16 5 C 0.60 9.26 7.79 -12.39 -0.10 9.16 16 6 O -0.53 -9.58 16.59 5.30 0.09 -9.49 16 7 C 0.02 0.24 7.13 -82.76 -0.59 -0.35 16 8 C -0.17 -1.85 10.81 -39.36 -0.43 -2.28 16 9 C 0.00 -0.04 11.33 -17.17 -0.19 -0.23 16 10 N -0.35 -3.36 3.56 -66.62 -0.24 -3.59 16 11 C 0.50 3.22 6.24 59.85 0.37 3.59 16 12 F -0.17 -1.30 17.46 2.25 0.04 -1.26 16 13 F -0.18 -1.21 17.46 2.25 0.04 -1.17 16 14 N -0.25 -2.95 11.67 33.42 0.39 -2.56 16 15 C -0.15 -2.64 3.47 -89.69 -0.31 -2.95 16 16 C 0.17 4.00 7.08 -2.83 -0.02 3.98 16 17 N -0.61 -15.81 3.70 -177.71 -0.66 -16.47 16 18 C -0.22 -6.28 10.70 -15.06 -0.16 -6.44 16 19 H 0.08 2.18 7.83 -52.49 -0.41 1.77 16 20 C -0.01 -0.26 5.50 -17.43 -0.10 -0.35 16 21 N -0.92 -27.58 11.39 55.49 0.63 -26.95 16 22 Si 0.91 22.31 29.55 -169.99 -5.02 17.28 16 23 H -0.28 -6.61 7.11 56.52 0.40 -6.21 16 24 H -0.29 -7.18 7.11 56.52 0.40 -6.78 16 25 H -0.29 -7.11 7.11 56.52 0.40 -6.71 16 26 C 0.13 2.62 7.64 -2.97 -0.02 2.60 16 27 H 0.05 0.75 8.14 -51.93 -0.42 0.32 16 28 H 0.05 0.67 8.14 -51.93 -0.42 0.25 16 29 H 0.07 0.88 7.52 -51.93 -0.39 0.48 16 30 H 0.41 5.35 8.33 -40.82 -0.34 5.01 16 31 H 0.17 1.64 8.06 -52.49 -0.42 1.21 16 32 H 0.19 1.02 8.06 -52.49 -0.42 0.59 16 33 H 0.17 0.61 8.14 -51.93 -0.42 0.18 16 34 H 0.09 1.53 8.14 -51.93 -0.42 1.11 16 35 H 0.03 0.66 7.99 -51.93 -0.41 0.24 16 36 H 0.07 1.86 7.17 -51.93 -0.37 1.49 16 37 H 0.25 7.32 8.31 -40.82 -0.34 6.98 16 38 H 0.04 0.83 8.14 -51.93 -0.42 0.41 16 39 H 0.04 0.68 8.10 -51.93 -0.42 0.26 16 LS Contribution 346.63 15.07 5.22 5.22 Total: -1.00 -34.50 346.63 -5.97 -40.47 By element: Atomic # 1 Polarization: 6.64 SS G_CDS: -4.83 Total: 1.81 kcal Atomic # 6 Polarization: 8.51 SS G_CDS: -1.36 Total: 7.15 kcal Atomic # 7 Polarization: -59.86 SS G_CDS: -0.15 Total: -60.01 kcal Atomic # 8 Polarization: -9.58 SS G_CDS: 0.09 Total: -9.49 kcal Atomic # 9 Polarization: -2.51 SS G_CDS: 0.08 Total: -2.43 kcal Atomic # 14 Polarization: 22.31 SS G_CDS: -5.02 Total: 17.28 kcal Total LS contribution 5.22 Total: 5.22 kcal Total: -34.50 -5.97 -40.47 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000969749802.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 50.702 kcal (2) G-P(sol) polarization free energy of solvation -34.501 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.201 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.973 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.474 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.228 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds