Wall clock time and date at job start Fri Apr 10 2020 18:26:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.34938 * 126.03988 * 2 1 4 4 C 1.35316 * 107.75032 * 179.97438 * 3 2 1 5 5 C 1.50693 * 126.04044 * 179.97438 * 4 3 2 6 6 H 1.09002 * 110.42615 * 27.31511 * 5 4 3 7 7 O 1.44424 * 110.37044 * 149.62624 * 5 4 3 8 8 C 1.44426 * 105.27588 * 159.34331 * 7 5 4 9 9 C 1.54482 * 104.80616 * 319.48618 * 8 7 5 10 10 C 1.54486 * 110.37650 * 265.00670 * 5 4 3 11 11 H 1.09002 * 110.62143 * 335.89267 * 10 5 4 12 12 C 1.52990 * 110.51065 * 98.54260 * 10 5 4 13 13 N 1.46901 * 109.46964 * 181.09714 * 12 10 5 14 14 C 1.46907 * 111.00064 * 180.02562 * 13 12 10 15 15 C 1.52996 * 109.47007 * 180.02562 * 14 13 12 16 16 C 1.53001 * 109.47350 * 60.00124 * 15 14 13 17 17 C 1.53004 * 109.47302 * 299.99646 * 15 14 13 18 18 C 1.52998 * 109.46929 * 180.02562 * 15 14 13 19 19 C 1.50706 * 109.47348 * 179.97438 * 18 15 14 20 20 H 1.08005 * 119.99758 * 359.97438 * 19 18 15 21 21 C 1.37871 * 120.00102 * 179.97438 * 19 18 15 22 22 N 1.31516 * 120.00217 * 0.02562 * 21 19 18 23 23 Si 1.86800 * 119.99766 * 179.97438 * 21 19 18 24 24 H 1.48501 * 109.47057 * 179.97438 * 23 21 19 25 25 H 1.48500 * 109.47389 * 300.00068 * 23 21 19 26 26 H 1.48504 * 109.47102 * 60.00417 * 23 21 19 27 27 C 1.39871 * 107.91742 * 0.26959 * 4 3 2 28 28 N 1.30839 * 108.20283 * 359.55083 * 27 4 3 29 29 H 1.09000 * 109.47211 * 89.99791 * 1 2 3 30 30 H 1.09011 * 109.47375 * 209.99795 * 1 2 3 31 31 H 1.08998 * 109.47238 * 329.99469 * 1 2 3 32 32 H 1.08003 * 126.12597 * 0.02562 * 3 2 1 33 33 H 1.09005 * 110.37252 * 200.65910 * 8 7 5 34 34 H 1.08999 * 110.47045 * 78.36582 * 8 7 5 35 35 H 1.08994 * 110.51589 * 265.33961 * 9 8 7 36 36 H 1.08995 * 110.62780 * 142.67892 * 9 8 7 37 37 H 1.09006 * 109.46966 * 61.10359 * 12 10 5 38 38 H 1.08997 * 109.47754 * 301.09913 * 12 10 5 39 39 H 1.00902 * 111.00171 * 303.95872 * 13 12 10 40 40 H 1.09000 * 109.46801 * 60.00152 * 14 13 12 41 41 H 1.09002 * 109.46963 * 300.00066 * 14 13 12 42 42 H 1.09002 * 109.47144 * 179.97438 * 16 15 14 43 43 H 1.08995 * 109.46867 * 299.99830 * 16 15 14 44 44 H 1.08994 * 109.47054 * 59.99763 * 16 15 14 45 45 H 1.09000 * 109.47381 * 300.00659 * 17 15 14 46 46 H 1.09005 * 109.46541 * 60.00604 * 17 15 14 47 47 H 1.09001 * 109.47046 * 179.97438 * 17 15 14 48 48 H 1.09001 * 109.47671 * 60.00109 * 18 15 14 49 49 H 1.09006 * 109.47297 * 299.99829 * 18 15 14 50 50 H 0.97001 * 119.99646 * 359.97438 * 22 21 19 51 51 H 1.07994 * 125.90002 * 179.73036 * 27 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2589 1.0911 0.0000 4 6 3.5437 0.6665 0.0006 5 6 4.7679 1.5452 0.0002 6 1 4.5476 2.5046 0.4683 7 8 5.8573 0.8899 0.6855 8 6 7.0539 1.5456 0.2122 9 6 6.8172 1.7556 -1.2998 10 6 5.2787 1.7554 -1.4425 11 1 4.9551 0.9383 -2.0872 12 6 4.7912 3.0968 -1.9936 13 7 5.2673 3.2613 -3.3736 14 6 4.8177 4.5416 -3.9365 15 6 5.3313 4.6762 -5.3714 16 6 4.7840 3.5261 -6.2191 17 6 6.8606 4.6277 -5.3724 18 6 4.8636 6.0099 -5.9574 19 6 5.3701 6.1429 -7.3706 20 1 5.9663 5.3551 -7.8069 21 6 5.0723 7.2701 -8.1064 22 7 4.3467 8.2297 -7.5749 23 14 5.7006 7.4352 -9.8578 24 1 5.2456 8.7291 -10.4271 25 1 7.1849 7.3886 -9.8577 26 1 5.1704 6.3189 -10.6812 27 6 3.5346 -0.7322 -0.0053 28 7 2.2891 -1.1329 0.0004 29 1 -0.3633 0.0000 -1.0277 30 1 -0.3634 -0.8901 0.5138 31 1 -0.3633 0.8899 0.5139 32 1 1.9281 2.1192 0.0004 33 1 7.9246 0.9102 0.3753 34 1 7.1862 2.5049 0.7124 35 1 7.2539 0.9373 -1.8721 36 1 7.2307 2.7105 -1.6242 37 1 5.1803 3.9064 -1.3761 38 1 3.7015 3.1209 -1.9799 39 1 6.2717 3.1782 -3.4219 40 1 5.2073 5.3609 -3.3323 41 1 3.7282 4.5760 -3.9362 42 1 5.1496 3.6223 -7.2414 43 1 5.1175 2.5762 -5.8014 44 1 3.6946 3.5608 -6.2184 45 1 7.2506 5.4470 -4.7684 46 1 7.1941 3.6777 -4.9547 47 1 7.2265 4.7231 -6.3947 48 1 5.2539 6.8291 -5.3535 49 1 3.7741 6.0450 -5.9567 50 1 4.0207 8.1441 -6.6653 51 1 4.4053 -1.3711 -0.0105 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000084325862.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 18:26:30 Heat of formation + Delta-G solvation = 14.147027 kcal Electronic energy + Delta-G solvation = -27525.667059 eV Core-core repulsion = 23847.030594 eV Total energy + Delta-G solvation = -3678.636465 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 321.216 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -41.50939 -39.65138 -37.71970 -35.02592 -33.63033 -32.73136 -31.54120 -31.24694 -28.83995 -27.09112 -26.53691 -26.37721 -25.54085 -23.85618 -23.14883 -22.23014 -21.21382 -20.63728 -20.16892 -18.23191 -17.46785 -16.47225 -16.40860 -15.84178 -15.66330 -15.44120 -15.14940 -14.67433 -14.44149 -13.97853 -13.77632 -13.66500 -13.44027 -13.23319 -13.13340 -12.97896 -12.80411 -12.65539 -12.58021 -11.94129 -11.73615 -11.57655 -11.40797 -11.16595 -11.01914 -10.93391 -10.88385 -10.80993 -10.67044 -10.55811 -10.10970 -10.01589 -9.98578 -9.79964 -9.63264 -9.28333 -8.59862 -8.40031 -8.28322 -8.16627 -6.30040 -3.97727 1.64267 2.27390 2.55179 3.45413 3.47155 3.65454 3.72616 4.21724 4.29334 4.46333 4.58021 4.58806 4.71998 4.81700 4.82967 4.91896 5.01514 5.06907 5.09977 5.17844 5.27975 5.37687 5.45003 5.51619 5.54636 5.57621 5.64918 5.68892 5.73682 5.86671 5.86930 5.92685 6.10861 6.17578 6.24481 6.40693 6.42279 6.57248 6.63755 6.68913 6.75130 6.75471 7.09838 7.11995 7.18567 7.30171 7.41507 7.47958 7.55406 7.63803 8.29409 8.52434 8.94661 9.72836 11.09895 Molecular weight = 321.22amu Principal moments of inertia in cm(-1) A = 0.016923 B = 0.002480 C = 0.002269 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1654.132814 B =11287.166380 C =12334.772185 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.102 3.898 2 N -0.377 5.377 3 C 0.067 3.933 4 C -0.232 4.232 5 C 0.162 3.838 6 H 0.072 0.928 7 O -0.366 6.366 8 C 0.045 3.955 9 C -0.153 4.153 10 C -0.108 4.108 11 H 0.094 0.906 12 C 0.069 3.931 13 N -0.685 5.685 14 C 0.069 3.931 15 C -0.051 4.051 16 C -0.115 4.115 17 C -0.128 4.128 18 C 0.021 3.979 19 C -0.587 4.587 20 H 0.053 0.947 21 C 0.012 3.988 22 N -0.917 5.917 23 Si 1.065 2.935 24 H -0.284 1.284 25 H -0.289 1.289 26 H -0.289 1.289 27 C 0.074 3.926 28 N -0.302 5.302 29 H 0.076 0.924 30 H 0.088 0.912 31 H 0.087 0.913 32 H 0.174 0.826 33 H 0.091 0.909 34 H 0.058 0.942 35 H 0.078 0.922 36 H 0.075 0.925 37 H 0.026 0.974 38 H 0.070 0.930 39 H 0.338 0.662 40 H 0.021 0.979 41 H 0.064 0.936 42 H 0.055 0.945 43 H 0.044 0.956 44 H 0.037 0.963 45 H 0.039 0.961 46 H 0.034 0.966 47 H 0.066 0.934 48 H 0.003 0.997 49 H 0.005 0.995 50 H 0.267 0.733 51 H 0.184 0.816 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.411 -15.074 18.522 23.922 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.040 4.040 2 N -0.158 5.158 3 C -0.080 4.080 4 C -0.243 4.243 5 C 0.103 3.897 6 H 0.090 0.910 7 O -0.285 6.285 8 C -0.032 4.032 9 C -0.190 4.190 10 C -0.127 4.127 11 H 0.112 0.888 12 C -0.061 4.061 13 N -0.317 5.317 14 C -0.059 4.059 15 C -0.052 4.052 16 C -0.172 4.172 17 C -0.186 4.186 18 C -0.017 4.017 19 C -0.625 4.625 20 H 0.071 0.929 21 C -0.191 4.191 22 N -0.554 5.554 23 Si 0.894 3.106 24 H -0.209 1.209 25 H -0.216 1.216 26 H -0.215 1.215 27 C -0.113 4.113 28 N -0.123 5.123 29 H 0.094 0.906 30 H 0.107 0.893 31 H 0.105 0.895 32 H 0.191 0.809 33 H 0.109 0.891 34 H 0.076 0.924 35 H 0.097 0.903 36 H 0.093 0.907 37 H 0.044 0.956 38 H 0.088 0.912 39 H 0.158 0.842 40 H 0.040 0.960 41 H 0.083 0.917 42 H 0.074 0.926 43 H 0.063 0.937 44 H 0.056 0.944 45 H 0.058 0.942 46 H 0.053 0.947 47 H 0.085 0.915 48 H 0.021 0.979 49 H 0.023 0.977 50 H 0.078 0.922 51 H 0.201 0.799 Dipole moment (debyes) X Y Z Total from point charges -2.916 -15.616 17.086 23.330 hybrid contribution 1.052 0.654 1.641 2.056 sum -1.864 -14.963 18.727 24.043 Atomic orbital electron populations 1.21867 0.74077 1.04433 1.03579 1.48441 1.06683 1.03788 1.56912 1.22170 0.90551 0.93531 1.01731 1.19687 0.93174 0.94207 1.17278 1.20965 0.84706 0.93121 0.90906 0.91025 1.89133 1.14941 1.58776 1.65659 1.23385 0.88846 0.97648 0.93284 1.23015 0.96170 1.03012 0.96843 1.22595 0.94472 0.99392 0.96279 0.88801 1.21892 1.00346 0.94384 0.89462 1.60547 1.17568 1.35658 1.17925 1.22113 0.99854 0.87910 0.96042 1.20478 0.94752 0.98103 0.91820 1.21584 0.99529 0.96457 0.99645 1.21763 0.95949 0.98430 1.02416 1.19249 0.95477 0.90602 0.96357 1.22021 1.35860 1.06150 0.98508 0.92919 1.25782 0.95449 0.92798 1.05119 1.70782 1.33616 1.34091 1.16943 0.83597 0.75886 0.76064 0.75083 1.20930 1.21555 1.21521 1.23693 0.94916 0.94408 0.98243 1.77390 1.01712 1.08153 1.25016 0.90577 0.89296 0.89455 0.80887 0.89085 0.92402 0.90325 0.90685 0.95582 0.91155 0.84203 0.96033 0.91748 0.92574 0.93746 0.94364 0.94232 0.94708 0.91548 0.97918 0.97696 0.92250 0.79930 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 0.59 11.47 59.85 0.69 1.28 16 2 N -0.38 -3.77 4.01 -68.16 -0.27 -4.04 16 3 C 0.07 0.63 11.40 -17.23 -0.20 0.44 16 4 C -0.23 -2.48 5.11 -105.06 -0.54 -3.02 16 5 C 0.16 1.63 3.30 -27.11 -0.09 1.54 16 6 H 0.07 0.67 7.87 -51.93 -0.41 0.26 16 7 O -0.37 -3.98 11.04 -35.23 -0.39 -4.37 16 8 C 0.05 0.39 7.63 37.94 0.29 0.68 16 9 C -0.15 -1.38 6.24 -25.16 -0.16 -1.53 16 10 C -0.11 -1.11 2.90 -89.05 -0.26 -1.36 16 11 H 0.09 1.12 7.87 -51.93 -0.41 0.71 16 12 C 0.07 0.79 4.89 -3.83 -0.02 0.77 16 13 N -0.68 -9.50 5.71 -113.78 -0.65 -10.15 16 14 C 0.07 1.17 4.65 -3.82 -0.02 1.15 16 15 C -0.05 -1.01 0.60 -154.51 -0.09 -1.10 16 16 C -0.11 -2.25 8.07 37.16 0.30 -1.95 16 17 C -0.13 -2.37 7.89 37.16 0.29 -2.08 16 18 C 0.02 0.51 3.35 -27.88 -0.09 0.42 16 19 C -0.59 -16.15 7.65 -34.44 -0.26 -16.42 16 20 H 0.05 1.43 5.68 -52.48 -0.30 1.13 16 21 C 0.01 0.33 5.46 -17.82 -0.10 0.23 16 22 N -0.92 -28.06 13.65 55.43 0.76 -27.31 16 23 Si 1.06 25.29 29.90 -169.99 -5.08 20.21 16 24 H -0.28 -6.79 7.11 56.52 0.40 -6.39 16 25 H -0.29 -6.54 7.11 56.52 0.40 -6.14 16 26 H -0.29 -6.56 7.11 56.52 0.40 -6.16 16 27 C 0.07 0.85 11.61 -17.36 -0.20 0.65 16 28 N -0.30 -3.73 12.58 30.62 0.39 -3.34 16 29 H 0.08 0.40 8.14 -51.93 -0.42 -0.03 16 30 H 0.09 0.46 8.14 -51.92 -0.42 0.04 16 31 H 0.09 0.29 8.14 -51.93 -0.42 -0.13 16 32 H 0.17 1.12 8.06 -52.48 -0.42 0.69 16 33 H 0.09 0.65 8.14 -51.93 -0.42 0.23 16 34 H 0.06 0.45 8.14 -51.93 -0.42 0.03 16 35 H 0.08 0.69 8.14 -51.93 -0.42 0.27 16 36 H 0.07 0.67 6.98 -51.93 -0.36 0.31 16 37 H 0.03 0.29 8.14 -51.93 -0.42 -0.13 16 38 H 0.07 0.81 8.14 -51.93 -0.42 0.39 16 39 H 0.34 4.50 5.48 -39.29 -0.22 4.28 16 40 H 0.02 0.37 8.14 -51.93 -0.42 -0.06 16 41 H 0.06 1.12 8.14 -51.93 -0.42 0.70 16 42 H 0.06 1.18 6.62 -51.93 -0.34 0.84 16 43 H 0.04 0.78 7.60 -51.93 -0.39 0.39 16 44 H 0.04 0.76 8.14 -51.93 -0.42 0.33 16 45 H 0.04 0.72 8.14 -51.93 -0.42 0.30 16 46 H 0.03 0.54 6.57 -51.93 -0.34 0.20 16 47 H 0.07 1.35 6.62 -51.93 -0.34 1.01 16 48 H 0.00 0.07 8.01 -51.93 -0.42 -0.35 16 49 H 0.00 0.13 8.01 -51.93 -0.42 -0.29 16 50 H 0.27 8.15 7.22 -40.82 -0.29 7.85 16 51 H 0.18 1.83 8.06 -52.49 -0.42 1.40 16 LS Contribution 398.79 15.07 6.01 6.01 Total: -1.00 -32.96 398.79 -8.66 -41.61 By element: Atomic # 1 Polarization: 10.65 SS G_CDS: -8.96 Total: 1.69 kcal Atomic # 6 Polarization: -19.86 SS G_CDS: -0.45 Total: -20.31 kcal Atomic # 7 Polarization: -45.05 SS G_CDS: 0.22 Total: -44.84 kcal Atomic # 8 Polarization: -3.98 SS G_CDS: -0.39 Total: -4.37 kcal Atomic # 14 Polarization: 25.29 SS G_CDS: -5.08 Total: 20.21 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -32.96 -8.66 -41.61 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000084325862.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.759 kcal (2) G-P(sol) polarization free energy of solvation -32.955 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.804 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.657 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.612 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.147 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds