Wall clock time and date at job start Fri Apr 10 2020 18:25:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46494 * 1 3 3 C 1.46500 * 120.00093 * 2 1 4 4 C 1.50701 * 109.47169 * 90.00196 * 3 2 1 5 5 H 1.08000 * 119.99711 * 359.97438 * 4 3 2 6 6 C 1.37881 * 119.99940 * 179.97438 * 4 3 2 7 7 N 1.31510 * 120.00183 * 0.02562 * 6 4 3 8 8 Si 1.86802 * 119.99675 * 179.97438 * 6 4 3 9 9 H 1.48503 * 109.46966 * 60.00679 * 8 6 4 10 10 H 1.48502 * 109.46772 * 180.02562 * 8 6 4 11 11 H 1.48497 * 109.47409 * 300.00352 * 8 6 4 12 12 C 1.34772 * 120.00214 * 179.97438 * 2 1 3 13 13 O 1.21543 * 120.00274 * 185.80135 * 12 2 1 14 14 C 1.47970 * 120.00037 * 5.80373 * 12 2 1 15 15 N 1.32849 * 119.60411 * 6.20462 * 14 12 2 16 16 C 1.31293 * 121.77137 * 180.02562 * 15 14 12 17 17 C 1.39742 * 120.78050 * 0.02562 * 16 15 14 18 18 C 1.48357 * 120.42944 * 180.02562 * 17 16 15 19 19 N 1.34089 * 126.67819 * 179.69240 * 18 17 16 20 20 N 1.28985 * 107.26014 * 179.83247 * 19 18 17 21 21 N 1.28729 * 108.95926 * 0.43125 * 20 19 18 22 22 H 0.96992 * 125.33436 * 179.68996 * 21 20 19 23 23 N 1.28877 * 109.32675 * 359.72408 * 21 20 19 24 24 C 1.39631 * 119.13871 * 359.97438 * 17 16 15 25 25 C 1.38523 * 118.38183 * 359.72779 * 24 17 16 26 26 Cl 1.73593 * 120.42880 * 180.26117 * 25 24 17 27 27 H 1.09002 * 109.46990 * 95.62205 * 1 2 3 28 28 H 1.08999 * 109.47253 * 215.61772 * 1 2 3 29 29 H 1.08998 * 109.46722 * 335.62498 * 1 2 3 30 30 H 1.09008 * 109.47352 * 209.99935 * 3 2 1 31 31 H 1.09002 * 109.47402 * 329.99701 * 3 2 1 32 32 H 0.96999 * 120.00494 * 179.97438 * 7 6 4 33 33 H 1.08007 * 119.60830 * 180.02562 * 16 15 14 34 34 H 1.08008 * 120.80622 * 180.02562 * 24 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4487 1.7037 1.4208 5 1 2.0974 1.0961 2.2417 6 6 3.1270 2.8774 1.6727 7 7 3.5543 3.6176 0.6732 8 14 3.4377 3.4170 3.4340 9 1 4.2395 2.3818 4.1346 10 1 4.1804 4.7030 3.4339 11 1 2.1400 3.5953 4.1334 12 6 2.1388 -1.1671 0.0005 13 8 3.3496 -1.1698 0.1069 14 6 1.4047 -2.4454 -0.1285 15 7 0.0982 -2.4305 -0.3682 16 6 -0.5950 -3.5389 -0.4900 17 6 0.0237 -4.7861 -0.3699 18 6 -0.7670 -6.0337 -0.5094 19 7 -0.3040 -7.2892 -0.4238 20 7 -1.3078 -8.0800 -0.5988 21 7 -2.3662 -7.3748 -0.7973 22 1 -3.2543 -7.7294 -0.9597 23 7 -2.0608 -6.1237 -0.7473 24 6 1.3959 -4.8429 -0.1179 25 6 2.0940 -3.6521 -0.0021 26 17 3.8027 -3.6608 0.3041 27 1 -0.3633 -0.1007 -1.0227 28 1 -0.3634 -0.8354 0.5985 29 1 -0.3633 0.9361 0.4241 30 1 3.1500 1.1384 -0.5139 31 1 1.6084 2.0284 -0.5139 32 1 4.0311 4.4435 0.8504 33 1 -1.6560 -3.4861 -0.6853 34 1 1.9016 -5.7924 -0.0205 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000821598137.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 18:25:39 Heat of formation + Delta-G solvation = 151.402004 kcal Electronic energy + Delta-G solvation = -23686.705274 eV Core-core repulsion = 19878.264258 eV Total energy + Delta-G solvation = -3808.441016 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 322.069 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -44.88832 -40.73802 -38.43098 -36.51955 -35.07006 -34.80666 -34.20858 -32.67942 -32.23725 -31.04768 -27.87113 -26.28031 -25.37964 -25.18686 -23.58706 -23.20793 -22.16094 -19.74794 -19.53812 -17.57352 -17.25000 -16.99871 -16.66127 -16.48555 -15.20467 -15.09659 -15.06719 -14.42167 -14.30273 -13.91141 -13.70877 -13.33754 -12.76270 -12.53247 -12.39997 -12.11795 -11.93656 -11.90362 -11.75954 -11.57416 -11.49606 -11.16929 -11.07590 -10.82203 -10.54760 -10.11100 -9.86264 -9.74503 -9.56349 -8.99630 -8.77274 -8.39967 -7.59044 -6.01056 -4.05558 -0.03325 0.70312 0.80173 1.77210 1.79588 2.08678 3.05290 3.16476 3.35552 3.39475 3.42865 3.63357 3.72248 3.90987 4.18229 4.42509 4.46860 4.64047 4.67807 4.90537 5.04507 5.12846 5.33158 5.52093 5.62552 5.92655 5.97588 6.06362 6.26943 6.56925 7.05307 7.40857 7.42824 7.56794 7.69608 7.94788 8.24797 8.36736 8.86537 9.03028 9.58995 11.06965 Molecular weight = 322.07amu Principal moments of inertia in cm(-1) A = 0.022880 B = 0.003093 C = 0.002887 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1223.493863 B = 9051.701406 C = 9696.447718 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.093 3.907 2 N -0.575 5.575 3 C 0.246 3.754 4 C -0.525 4.525 5 H 0.058 0.942 6 C 0.062 3.938 7 N -0.896 5.896 8 Si 0.898 3.102 9 H -0.276 1.276 10 H -0.287 1.287 11 H -0.277 1.277 12 C 0.542 3.458 13 O -0.507 6.507 14 C 0.124 3.876 15 N -0.432 5.432 16 C 0.135 3.865 17 C -0.053 4.053 18 C 0.225 3.775 19 N -0.264 5.264 20 N -0.045 5.045 21 N -0.224 5.224 22 H 0.477 0.523 23 N -0.286 5.286 24 C -0.034 4.034 25 C -0.047 4.047 26 Cl -0.002 7.002 27 H 0.049 0.951 28 H 0.075 0.925 29 H 0.063 0.937 30 H 0.045 0.955 31 H 0.036 0.964 32 H 0.264 0.736 33 H 0.176 0.824 34 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.601 -21.216 -4.247 25.557 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.050 4.050 2 N -0.306 5.306 3 C 0.127 3.873 4 C -0.563 4.563 5 H 0.076 0.924 6 C -0.140 4.140 7 N -0.535 5.535 8 Si 0.726 3.274 9 H -0.201 1.201 10 H -0.212 1.212 11 H -0.203 1.203 12 C 0.325 3.675 13 O -0.382 6.382 14 C -0.016 4.016 15 N -0.143 5.143 16 C -0.027 4.027 17 C -0.059 4.059 18 C -0.056 4.056 19 N -0.137 5.137 20 N -0.041 5.041 21 N -0.070 5.070 22 H 0.332 0.668 23 N -0.137 5.137 24 C -0.062 4.062 25 C -0.077 4.077 26 Cl 0.027 6.973 27 H 0.067 0.933 28 H 0.093 0.907 29 H 0.082 0.918 30 H 0.063 0.937 31 H 0.054 0.946 32 H 0.073 0.927 33 H 0.193 0.807 34 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -13.161 -20.815 -4.301 24.999 hybrid contribution -0.019 -0.332 0.962 1.018 sum -13.180 -21.146 -3.339 25.140 Atomic orbital electron populations 1.21919 0.80026 1.02022 1.01076 1.48092 1.07203 1.06966 1.68292 1.19396 0.92522 0.77696 0.97713 1.21372 1.36523 1.06293 0.92147 0.92408 1.24917 0.95337 0.96352 0.97408 1.69916 1.38380 1.14380 1.30775 0.86560 0.78361 0.77795 0.84722 1.20127 1.21214 1.20263 1.17607 0.86919 0.82492 0.80443 1.90881 1.12430 1.85726 1.49126 1.21939 0.89744 0.94746 0.95155 1.68584 1.05946 1.28863 1.10879 1.23171 1.01018 0.85696 0.92801 1.18296 0.92192 0.89290 1.06167 1.23294 0.87346 0.93384 1.01571 1.76140 1.20621 0.99296 1.17638 1.78945 0.89637 1.21788 1.13691 1.47747 1.13132 1.01557 1.44612 0.66801 1.74946 1.16050 1.01352 1.21396 1.21517 0.92146 0.98472 0.94104 1.21836 0.89602 0.93685 1.02589 1.98451 1.07211 1.98577 1.93021 0.93280 0.90682 0.91810 0.93715 0.94555 0.92661 0.80717 0.82142 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 1.61 9.10 59.84 0.54 2.15 16 2 N -0.58 -12.59 2.86 -184.03 -0.53 -13.12 16 3 C 0.25 6.43 5.09 -5.19 -0.03 6.41 16 4 C -0.52 -14.92 9.39 -34.44 -0.32 -15.25 16 5 H 0.06 1.65 7.81 -52.49 -0.41 1.24 16 6 C 0.06 1.77 5.46 -17.82 -0.10 1.67 16 7 N -0.90 -26.60 13.29 55.43 0.74 -25.87 16 8 Si 0.90 21.99 29.54 -169.99 -5.02 16.97 16 9 H -0.28 -6.79 7.11 56.52 0.40 -6.39 16 10 H -0.29 -6.89 7.11 56.52 0.40 -6.49 16 11 H -0.28 -6.59 7.11 56.52 0.40 -6.19 16 12 C 0.54 11.62 7.62 -12.27 -0.09 11.52 16 13 O -0.51 -12.38 13.59 5.33 0.07 -12.31 16 14 C 0.12 2.08 6.57 -82.95 -0.54 1.53 16 15 N -0.43 -6.09 6.13 -9.52 -0.06 -6.15 16 16 C 0.14 1.47 10.86 -17.22 -0.19 1.29 16 17 C -0.05 -0.58 5.90 -104.65 -0.62 -1.20 16 18 C 0.22 2.25 7.95 -156.28 -1.24 1.00 16 19 N -0.26 -2.79 12.30 32.14 0.40 -2.39 16 20 N -0.05 -0.39 13.47 60.35 0.81 0.43 16 21 N -0.22 -1.26 7.90 60.35 0.48 -0.78 16 22 H 0.48 0.32 8.96 -340.36 -3.05 -2.73 16 23 N -0.29 -2.30 12.10 32.16 0.39 -1.92 16 24 C -0.03 -0.40 9.63 -38.96 -0.38 -0.78 16 25 C -0.05 -0.70 6.36 -38.99 -0.25 -0.94 16 26 Cl 0.00 -0.03 26.02 -51.86 -1.35 -1.38 16 27 H 0.05 0.75 7.98 -51.93 -0.41 0.34 16 28 H 0.07 1.19 5.81 -51.93 -0.30 0.88 16 29 H 0.06 1.11 8.03 -51.93 -0.42 0.69 16 30 H 0.04 1.30 7.51 -51.92 -0.39 0.91 16 31 H 0.04 0.96 8.07 -51.93 -0.42 0.54 16 32 H 0.26 7.42 8.31 -40.82 -0.34 7.08 16 33 H 0.18 1.41 7.89 -52.48 -0.41 1.00 16 34 H 0.16 1.60 7.96 -52.48 -0.42 1.18 16 LS Contribution 320.78 15.07 4.83 4.83 Total: -1.00 -34.39 320.78 -7.82 -42.21 By element: Atomic # 1 Polarization: -2.57 SS G_CDS: -5.37 Total: -7.94 kcal Atomic # 6 Polarization: 10.63 SS G_CDS: -3.21 Total: 7.42 kcal Atomic # 7 Polarization: -52.02 SS G_CDS: 2.23 Total: -49.79 kcal Atomic # 8 Polarization: -12.38 SS G_CDS: 0.07 Total: -12.31 kcal Atomic # 14 Polarization: 21.99 SS G_CDS: -5.02 Total: 16.97 kcal Atomic # 17 Polarization: -0.03 SS G_CDS: -1.35 Total: -1.38 kcal Total LS contribution 4.83 Total: 4.83 kcal Total: -34.39 -7.82 -42.21 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000821598137.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 193.607 kcal (2) G-P(sol) polarization free energy of solvation -34.388 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 159.219 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.817 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.205 kcal (6) G-S(sol) free energy of system = (1) + (5) 151.402 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds