Wall clock time and date at job start Fri Apr 10 2020 18:28:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42900 * 114.00334 * 2 1 4 4 C 1.53001 * 109.47055 * 179.97438 * 3 2 1 5 5 N 1.46506 * 109.46724 * 179.97438 * 4 3 2 6 6 C 1.34257 * 125.74947 * 125.32345 * 5 4 3 7 7 C 1.38045 * 107.41376 * 180.14647 * 6 5 4 8 8 C 1.47430 * 126.41225 * 179.86839 * 7 6 5 9 9 O 1.21601 * 120.00239 * 359.71001 * 8 7 6 10 10 N 1.34777 * 120.00041 * 179.70377 * 8 7 6 11 11 C 1.46505 * 120.00207 * 179.97438 * 10 8 7 12 12 H 1.09000 * 109.46918 * 35.00652 * 11 10 8 13 13 C 1.52995 * 109.46965 * 275.00529 * 11 10 8 14 14 C 1.53002 * 109.46769 * 155.00392 * 11 10 8 15 15 C 1.53496 * 114.20179 * 180.02562 * 14 11 10 16 16 N 1.47070 * 87.98352 * 87.52002 * 15 14 11 17 17 C 1.36935 * 136.05550 * 207.07944 * 16 15 14 18 18 H 1.08005 * 120.00172 * 6.50069 * 17 16 15 19 19 C 1.38815 * 119.99990 * 186.49806 * 17 16 15 20 20 N 1.31619 * 119.99663 * 6.42579 * 19 17 16 21 21 Si 1.86800 * 119.99976 * 186.42252 * 19 17 16 22 22 H 1.48495 * 109.47340 * 265.02201 * 21 19 17 23 23 H 1.48498 * 109.46951 * 25.02385 * 21 19 17 24 24 H 1.48498 * 109.46744 * 145.01993 * 21 19 17 25 25 C 1.47064 * 87.88277 * 27.34197 * 16 15 14 26 26 C 1.41283 * 107.17084 * 359.60135 * 7 6 5 27 27 N 1.30449 * 108.02303 * 0.24819 * 26 7 6 28 28 H 1.09006 * 109.47094 * 300.00305 * 1 2 3 29 29 H 1.09002 * 109.46954 * 59.99825 * 1 2 3 30 30 H 1.09002 * 109.47395 * 179.97438 * 1 2 3 31 31 H 1.09001 * 109.46705 * 59.99702 * 3 2 1 32 32 H 1.08994 * 109.47137 * 300.00434 * 3 2 1 33 33 H 1.09006 * 109.46945 * 60.00533 * 4 3 2 34 34 H 1.08992 * 109.47383 * 299.99919 * 4 3 2 35 35 H 1.07999 * 126.29431 * 359.97438 * 6 5 4 36 36 H 0.96997 * 119.99864 * 0.02562 * 10 8 7 37 37 H 1.09001 * 109.47570 * 60.00269 * 13 11 10 38 38 H 1.09008 * 109.46757 * 179.97438 * 13 11 10 39 39 H 1.09000 * 109.47403 * 299.99826 * 13 11 10 40 40 H 1.08996 * 113.41116 * 46.80608 * 14 11 10 41 41 H 1.09004 * 113.46865 * 332.74440 * 15 14 11 42 42 H 1.08993 * 113.51976 * 202.30849 * 15 14 11 43 43 H 0.97005 * 119.99413 * 179.97438 * 20 19 17 44 44 H 1.09000 * 113.46743 * 87.44096 * 25 16 15 45 45 H 1.08999 * 113.46191 * 217.87327 * 25 16 15 46 46 H 1.08005 * 125.98629 * 180.20551 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5355 1.1845 0.0006 5 7 4.1314 2.5229 0.0000 6 6 5.0257 2.9838 0.8891 7 6 5.3269 4.2839 0.5360 8 6 6.2628 5.1854 1.2324 9 8 6.8524 4.8015 2.2242 10 7 6.4651 6.4349 0.7696 11 6 7.3947 7.3310 1.4619 12 1 8.2290 6.7527 1.8589 13 6 6.6672 8.0318 2.6110 14 6 7.9220 8.3776 0.4782 15 6 8.9110 9.3774 1.0934 16 7 9.9875 8.4254 0.7807 17 6 11.2241 8.1330 1.2909 18 1 11.5587 8.6078 2.2015 19 6 12.0478 7.2263 0.6378 20 7 11.6957 6.7438 -0.5350 21 14 13.6558 6.6912 1.4235 22 1 14.7643 7.5320 0.9045 23 1 13.5632 6.8488 2.8972 24 1 13.9182 5.2673 1.0934 25 6 9.1541 7.9301 -0.3252 26 6 4.5750 4.5867 -0.6212 27 7 3.8689 3.5344 -0.9306 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3634 -1.0277 -0.0005 31 1 1.6886 1.8463 0.8900 32 1 1.6887 1.8464 -0.8899 33 1 3.8575 0.6435 -0.8892 34 1 3.8568 0.6438 0.8908 35 1 5.4323 2.4387 1.7280 36 1 5.9945 6.7413 -0.0214 37 1 6.2915 7.2861 3.3117 38 1 7.3590 8.6981 3.1263 39 1 5.8329 8.6101 2.2139 40 1 7.1397 8.8367 -0.1262 41 1 8.7645 9.5310 2.1625 42 1 8.9847 10.3131 0.5394 43 1 12.2715 6.1105 -0.9916 44 1 9.2913 8.4840 -1.2539 45 1 9.2147 6.8508 -0.4647 46 1 4.5829 5.5253 -1.1556 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000970812721.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 18:28:08 Heat of formation + Delta-G solvation = 57.099300 kcal Electronic energy + Delta-G solvation = -26761.315528 eV Core-core repulsion = 22883.282608 eV Total energy + Delta-G solvation = -3878.032920 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 322.179 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -41.52110 -39.36098 -38.46072 -37.94639 -34.51382 -34.19432 -32.12728 -30.75458 -30.37419 -29.05152 -27.54122 -26.76579 -24.81734 -24.01432 -23.75166 -22.89913 -21.38018 -20.84477 -19.85625 -18.86340 -17.79698 -16.90183 -16.74087 -16.60014 -15.92650 -15.89142 -15.56750 -15.08077 -14.78863 -14.49899 -14.31160 -14.09630 -13.78727 -13.60352 -13.21172 -13.01871 -12.86807 -12.50700 -12.46601 -12.14470 -11.91331 -11.85211 -11.70193 -11.33986 -11.14342 -10.86678 -10.71769 -10.64603 -10.26653 -10.25497 -9.84286 -9.79505 -9.72923 -9.52653 -9.13390 -8.87739 -8.71865 -8.51549 -6.80517 -5.71309 -3.01501 1.43939 1.93521 2.12498 3.27951 3.44701 3.50123 3.52482 3.56511 3.73318 4.17552 4.39219 4.53312 4.61060 4.62790 4.74719 4.83411 4.84326 5.04747 5.14614 5.16155 5.18499 5.28689 5.33397 5.37074 5.41348 5.58658 5.68280 5.85076 5.98180 6.12059 6.18800 6.24552 6.37176 6.47486 6.53025 6.62211 6.62587 6.71785 6.82218 7.00845 7.25971 7.34899 7.36539 7.61120 7.95016 8.04151 8.66104 9.10564 9.77656 10.72032 11.47418 Molecular weight = 322.18amu Principal moments of inertia in cm(-1) A = 0.018587 B = 0.002428 C = 0.002282 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1506.097758 B =11528.515425 C =12269.280949 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.391 6.391 3 C 0.051 3.949 4 C 0.135 3.865 5 N -0.365 5.365 6 C 0.129 3.871 7 C -0.283 4.283 8 C 0.593 3.407 9 O -0.548 6.548 10 N -0.714 5.714 11 C 0.173 3.827 12 H 0.102 0.898 13 C -0.157 4.157 14 C -0.156 4.156 15 C 0.125 3.875 16 N -0.607 5.607 17 C -0.217 4.217 18 H 0.080 0.920 19 C -0.007 4.007 20 N -0.919 5.919 21 Si 0.910 3.090 22 H -0.290 1.290 23 H -0.279 1.279 24 H -0.290 1.290 25 C 0.166 3.834 26 C 0.085 3.915 27 N -0.300 5.300 28 H 0.043 0.957 29 H 0.044 0.956 30 H 0.090 0.910 31 H 0.056 0.944 32 H 0.067 0.933 33 H 0.098 0.902 34 H 0.109 0.891 35 H 0.189 0.811 36 H 0.393 0.607 37 H 0.053 0.947 38 H 0.067 0.933 39 H 0.049 0.951 40 H 0.069 0.931 41 H 0.044 0.956 42 H 0.033 0.967 43 H 0.252 0.748 44 H 0.028 0.972 45 H 0.062 0.938 46 H 0.191 0.809 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -23.720 -8.338 0.138 25.143 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 O -0.309 6.309 3 C -0.026 4.026 4 C 0.013 3.987 5 N -0.145 5.145 6 C -0.022 4.022 7 C -0.297 4.297 8 C 0.379 3.621 9 O -0.426 6.426 10 N -0.364 5.364 11 C 0.069 3.931 12 H 0.120 0.880 13 C -0.215 4.215 14 C -0.176 4.176 15 C -0.002 4.002 16 N -0.333 5.333 17 C -0.344 4.344 18 H 0.098 0.902 19 C -0.204 4.204 20 N -0.565 5.565 21 Si 0.740 3.260 22 H -0.218 1.218 23 H -0.205 1.205 24 H -0.216 1.216 25 C 0.040 3.960 26 C -0.103 4.103 27 N -0.120 5.120 28 H 0.062 0.938 29 H 0.063 0.937 30 H 0.108 0.892 31 H 0.074 0.926 32 H 0.086 0.914 33 H 0.117 0.883 34 H 0.127 0.873 35 H 0.206 0.794 36 H 0.227 0.773 37 H 0.072 0.928 38 H 0.086 0.914 39 H 0.068 0.932 40 H 0.088 0.912 41 H 0.062 0.938 42 H 0.050 0.950 43 H 0.062 0.938 44 H 0.045 0.955 45 H 0.080 0.920 46 H 0.208 0.792 Dipole moment (debyes) X Y Z Total from point charges -23.764 -9.600 0.063 25.630 hybrid contribution 1.144 0.548 0.264 1.296 sum -22.620 -9.052 0.327 24.366 Atomic orbital electron populations 1.22784 0.79934 1.03126 1.00391 1.87782 1.20589 1.26931 1.95609 1.22650 0.92520 0.85335 1.02104 1.21471 0.92632 0.78796 1.05760 1.48268 1.33094 1.12014 1.21141 1.23000 0.90603 0.94349 0.94207 1.20396 1.09920 0.96348 1.03068 1.17151 0.80501 0.81044 0.83385 1.90784 1.49666 1.75644 1.26512 1.45816 1.45936 1.13188 1.31436 1.20579 0.91450 0.89900 0.91171 0.87995 1.22128 1.00344 1.00481 0.98552 1.23319 0.97162 0.97984 0.99122 1.22426 0.87381 0.92542 0.97873 1.45714 1.16157 1.37584 1.33877 1.18924 0.90037 1.20865 1.04592 0.90184 1.24805 0.98495 1.00673 0.96446 1.69847 1.38175 1.34330 1.14194 0.86128 0.83344 0.77859 0.78625 1.21759 1.20475 1.21644 1.22035 0.84018 0.99527 0.90379 1.24106 0.93512 0.97785 0.94847 1.77123 1.24742 0.96864 1.13248 0.93792 0.93690 0.89158 0.92570 0.91439 0.88345 0.87292 0.79397 0.77327 0.92768 0.91392 0.93184 0.91238 0.93814 0.94968 0.93759 0.95465 0.91996 0.79194 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.18 11.01 101.05 1.11 1.29 16 2 O -0.39 -3.06 10.70 -35.23 -0.38 -3.44 16 3 C 0.05 0.38 6.11 37.16 0.23 0.61 16 4 C 0.13 1.00 6.86 -4.04 -0.03 0.97 16 5 N -0.36 -3.77 3.65 -60.80 -0.22 -3.99 16 6 C 0.13 1.47 11.25 -16.56 -0.19 1.29 16 7 C -0.28 -3.74 6.13 -105.07 -0.64 -4.39 16 8 C 0.59 9.75 7.78 -12.52 -0.10 9.65 16 9 O -0.55 -11.22 16.56 5.28 0.09 -11.13 16 10 N -0.71 -10.70 5.07 -54.88 -0.28 -10.98 16 11 C 0.17 3.03 2.43 -67.93 -0.16 2.86 16 12 H 0.10 2.32 7.36 -51.93 -0.38 1.94 16 13 C -0.16 -2.36 9.29 37.16 0.35 -2.02 16 14 C -0.16 -2.77 3.73 -89.97 -0.34 -3.11 16 15 C 0.12 2.51 8.08 -8.51 -0.07 2.44 16 16 N -0.61 -15.66 3.57 -184.62 -0.66 -16.32 16 17 C -0.22 -6.20 10.73 -15.06 -0.16 -6.37 16 18 H 0.08 2.21 7.84 -52.48 -0.41 1.80 16 19 C -0.01 -0.22 5.50 -17.43 -0.10 -0.31 16 20 N -0.92 -28.05 11.81 55.49 0.66 -27.39 16 21 Si 0.91 22.88 29.56 -169.99 -5.02 17.86 16 22 H -0.29 -7.22 7.11 56.52 0.40 -6.82 16 23 H -0.28 -6.83 7.11 56.52 0.40 -6.43 16 24 H -0.29 -7.38 7.11 56.52 0.40 -6.97 16 25 C 0.17 3.88 6.77 -8.38 -0.06 3.83 16 26 C 0.09 0.96 11.50 -16.98 -0.20 0.76 16 27 N -0.30 -3.52 12.33 30.86 0.38 -3.14 16 28 H 0.04 0.20 8.14 -51.93 -0.42 -0.23 16 29 H 0.04 0.21 8.14 -51.93 -0.42 -0.22 16 30 H 0.09 0.34 8.14 -51.93 -0.42 -0.08 16 31 H 0.06 0.41 8.14 -51.93 -0.42 -0.02 16 32 H 0.07 0.54 8.14 -51.93 -0.42 0.12 16 33 H 0.10 0.70 8.14 -51.93 -0.42 0.28 16 34 H 0.11 0.59 8.06 -51.93 -0.42 0.17 16 35 H 0.19 1.79 8.06 -52.49 -0.42 1.37 16 36 H 0.39 4.60 7.56 -40.82 -0.31 4.29 16 37 H 0.05 0.85 8.14 -51.93 -0.42 0.43 16 38 H 0.07 1.03 6.50 -51.92 -0.34 0.69 16 39 H 0.05 0.64 8.14 -51.93 -0.42 0.21 16 40 H 0.07 1.01 8.14 -51.93 -0.42 0.59 16 41 H 0.04 0.83 6.43 -51.93 -0.33 0.50 16 42 H 0.03 0.63 8.14 -51.93 -0.42 0.21 16 43 H 0.25 7.49 8.31 -40.82 -0.34 7.15 16 44 H 0.03 0.66 8.14 -51.93 -0.42 0.23 16 45 H 0.06 1.63 7.56 -51.93 -0.39 1.24 16 46 H 0.19 1.53 7.50 -52.48 -0.39 1.13 16 LS Contribution 386.46 15.07 5.82 5.82 Total: -1.00 -36.47 386.46 -7.15 -43.62 By element: Atomic # 1 Polarization: 8.77 SS G_CDS: -7.19 Total: 1.59 kcal Atomic # 6 Polarization: 7.86 SS G_CDS: -0.35 Total: 7.51 kcal Atomic # 7 Polarization: -61.70 SS G_CDS: -0.12 Total: -61.82 kcal Atomic # 8 Polarization: -14.28 SS G_CDS: -0.29 Total: -14.57 kcal Atomic # 14 Polarization: 22.88 SS G_CDS: -5.02 Total: 17.86 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -36.47 -7.15 -43.62 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000970812721.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.715 kcal (2) G-P(sol) polarization free energy of solvation -36.467 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 64.248 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.149 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.616 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.099 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds