Wall clock time and date at job start Fri Apr 10 2020 18:28:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.34948 * 126.03439 * 2 1 4 4 C 1.35325 * 107.74622 * 179.97438 * 3 2 1 5 5 C 1.50694 * 126.04124 * 179.97438 * 4 3 2 6 6 C 1.50696 * 109.47203 * 90.00178 * 5 4 3 7 7 O 1.21281 * 120.00051 * 0.02562 * 6 5 4 8 8 N 1.34780 * 120.00023 * 180.02562 * 6 5 4 9 9 C 1.46508 * 119.99754 * 180.02562 * 8 6 5 10 10 C 1.52996 * 109.46878 * 180.02562 * 9 8 6 11 11 H 1.09000 * 108.57443 * 57.93836 * 10 9 8 12 12 C 1.47479 * 108.44073 * 175.91682 * 10 9 8 13 13 N 1.50120 * 106.48920 * 177.92732 * 12 10 9 14 14 C 1.36940 * 120.63606 * 111.37035 * 13 12 10 15 15 H 1.07996 * 119.99829 * 155.83039 * 14 13 12 16 16 C 1.38808 * 119.99859 * 335.83018 * 14 13 12 17 17 N 1.31619 * 120.00289 * 340.44450 * 16 14 13 18 18 Si 1.86805 * 120.00013 * 160.44216 * 16 14 13 19 19 H 1.48503 * 109.47046 * 269.99946 * 18 16 14 20 20 H 1.48497 * 109.46796 * 29.99838 * 18 16 14 21 21 H 1.48492 * 109.47003 * 149.99903 * 18 16 14 22 22 C 1.43420 * 118.72677 * 291.10186 * 13 12 10 23 23 C 1.55324 * 116.24469 * 89.62528 * 22 13 12 24 24 C 1.55187 * 108.87168 * 319.46354 * 23 22 13 25 25 O 1.39646 * 110.56791 * 322.13814 * 24 23 22 26 26 C 1.39869 * 107.91838 * 0.26637 * 4 3 2 27 27 N 1.30841 * 108.19888 * 359.55085 * 26 4 3 28 28 H 1.09005 * 109.47066 * 90.00223 * 1 2 3 29 29 H 1.09000 * 109.47333 * 209.99680 * 1 2 3 30 30 H 1.09000 * 109.47292 * 330.00458 * 1 2 3 31 31 H 1.07996 * 126.12953 * 0.02562 * 3 2 1 32 32 H 1.09004 * 109.47249 * 330.00082 * 5 4 3 33 33 H 1.09002 * 109.47115 * 210.00624 * 5 4 3 34 34 H 0.96991 * 119.99992 * 359.97438 * 8 6 5 35 35 H 1.08997 * 109.47097 * 59.99732 * 9 8 6 36 36 H 1.09000 * 109.46898 * 299.99708 * 9 8 6 37 37 H 1.09001 * 110.11276 * 58.71790 * 12 10 9 38 38 H 1.09004 * 110.15187 * 297.16028 * 12 10 9 39 39 H 0.97000 * 120.00002 * 180.02562 * 17 16 14 40 40 H 1.09010 * 108.12835 * 211.38518 * 22 13 12 41 41 H 1.08997 * 108.12953 * 328.07519 * 22 13 12 42 42 H 1.08999 * 109.57226 * 79.27564 * 23 22 13 43 43 H 1.09002 * 109.57784 * 199.64258 * 23 22 13 44 44 H 1.09000 * 109.26051 * 82.42606 * 24 23 22 45 45 H 1.09001 * 109.25552 * 201.86337 * 24 23 22 46 46 H 1.07993 * 125.89855 * 179.73632 * 26 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2588 1.0913 0.0000 4 6 3.5437 0.6666 0.0006 5 6 4.7680 1.5454 0.0002 6 6 5.1758 1.8392 1.4209 7 8 4.5356 1.3799 2.3429 8 7 6.2519 2.6125 1.6669 9 6 6.6487 2.8977 3.0481 10 6 7.8907 3.7910 3.0477 11 1 7.6612 4.7046 2.4992 12 6 8.2116 4.1444 4.4431 13 7 9.4614 4.9748 4.3958 14 6 9.4264 6.3070 4.7109 15 1 10.3214 6.8043 5.0543 16 6 8.2405 7.0181 4.5890 17 7 7.2698 6.5540 3.8309 18 14 8.0223 8.6337 5.5008 19 1 7.4373 8.3711 6.8403 20 1 9.3423 9.2954 5.6583 21 1 7.1138 9.5190 4.7288 22 6 10.6937 4.3448 4.0198 23 6 11.0272 4.3388 2.5028 24 6 9.7285 4.0482 1.7045 25 8 8.9419 3.1076 2.3729 26 6 3.5347 -0.7320 -0.0052 27 7 2.2892 -1.1327 0.0006 28 1 -0.3633 0.0000 -1.0277 29 1 -0.3634 -0.8900 0.5138 30 1 -0.3634 0.8900 0.5138 31 1 1.9281 2.1193 0.0004 32 1 4.5443 2.4799 -0.5143 33 1 5.5822 1.0339 -0.5132 34 1 6.7641 2.9796 0.9295 35 1 6.8729 1.9631 3.5620 36 1 5.8343 3.4086 3.5619 37 1 8.3864 3.2412 5.0278 38 1 7.3972 4.7215 4.8812 39 1 6.4413 7.0511 3.7454 40 1 11.5060 4.8490 4.5436 41 1 10.6638 3.3102 4.3615 42 1 11.4242 5.3115 2.2124 43 1 11.7651 3.5642 2.2941 44 1 9.1630 4.9728 1.5889 45 1 9.9908 3.6624 0.7194 46 1 4.4054 -1.3708 -0.0103 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001149363497.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 18:28:57 Heat of formation + Delta-G solvation = 30.663371 kcal Electronic energy + Delta-G solvation = -27641.752995 eV Core-core repulsion = 23762.573727 eV Total energy + Delta-G solvation = -3879.179268 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 322.179 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -41.26143 -39.42689 -38.56516 -35.01021 -34.42903 -33.67887 -32.23348 -31.76283 -31.05023 -28.89139 -28.17840 -26.19774 -25.33944 -24.82440 -22.54954 -21.16010 -20.76844 -20.74245 -19.71983 -19.54738 -17.21111 -16.88780 -16.69414 -16.00887 -15.45515 -15.42059 -14.98657 -14.89416 -14.47079 -14.39491 -14.04671 -13.84312 -13.44313 -13.19439 -13.10394 -12.95451 -12.63084 -12.61996 -12.44782 -12.27953 -11.90111 -11.69611 -11.40568 -11.20148 -10.85656 -10.74217 -10.63907 -10.46869 -10.15655 -9.97249 -9.70001 -9.55764 -9.49058 -9.44960 -8.79387 -8.57916 -8.51533 -8.38502 -6.82741 -5.92957 -3.31178 1.84201 2.44896 2.72452 3.03227 3.32854 3.40725 3.41469 3.75661 4.39053 4.42833 4.72164 4.75806 4.91328 4.99069 5.06563 5.16588 5.24244 5.26031 5.28495 5.38324 5.62637 5.73388 5.75712 5.82497 5.93222 6.04030 6.07764 6.16380 6.34484 6.42867 6.49566 6.58732 6.60916 6.67522 6.72516 6.82205 6.92905 6.94585 6.99600 7.12361 7.33120 7.64076 7.71366 7.94628 8.14879 8.31425 8.64381 9.06395 9.74660 10.28966 11.16092 Molecular weight = 322.18amu Principal moments of inertia in cm(-1) A = 0.017757 B = 0.002813 C = 0.002533 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1576.474538 B = 9951.162967 C =11050.688273 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.104 3.896 2 N -0.379 5.379 3 C 0.067 3.933 4 C -0.215 4.215 5 C -0.061 4.061 6 C 0.507 3.493 7 O -0.543 6.543 8 N -0.717 5.717 9 C 0.122 3.878 10 C 0.061 3.939 11 H 0.106 0.894 12 C 0.143 3.857 13 N -0.588 5.588 14 C -0.248 4.248 15 H 0.069 0.931 16 C 0.002 3.998 17 N -0.907 5.907 18 Si 0.904 3.096 19 H -0.288 1.288 20 H -0.281 1.281 21 H -0.292 1.292 22 C 0.161 3.839 23 C -0.172 4.172 24 C 0.068 3.932 25 O -0.369 6.369 26 C 0.063 3.937 27 N -0.302 5.302 28 H 0.072 0.928 29 H 0.087 0.913 30 H 0.086 0.914 31 H 0.171 0.829 32 H 0.096 0.904 33 H 0.099 0.901 34 H 0.399 0.601 35 H 0.060 0.940 36 H 0.075 0.925 37 H 0.019 0.981 38 H 0.104 0.896 39 H 0.255 0.745 40 H 0.032 0.968 41 H 0.031 0.969 42 H 0.056 0.944 43 H 0.049 0.951 44 H 0.062 0.938 45 H 0.051 0.949 46 H 0.181 0.819 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.482 -8.572 -10.848 15.721 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.038 4.038 2 N -0.161 5.161 3 C -0.079 4.079 4 C -0.226 4.226 5 C -0.102 4.102 6 C 0.292 3.708 7 O -0.420 6.420 8 N -0.368 5.368 9 C -0.002 4.002 10 C 0.003 3.997 11 H 0.124 0.876 12 C 0.018 3.982 13 N -0.309 5.309 14 C -0.377 4.377 15 H 0.087 0.913 16 C -0.196 4.196 17 N -0.552 5.552 18 Si 0.734 3.266 19 H -0.215 1.215 20 H -0.206 1.206 21 H -0.219 1.219 22 C 0.032 3.968 23 C -0.214 4.214 24 C -0.010 4.010 25 O -0.287 6.287 26 C -0.123 4.123 27 N -0.124 5.124 28 H 0.091 0.909 29 H 0.106 0.894 30 H 0.104 0.896 31 H 0.189 0.811 32 H 0.114 0.886 33 H 0.117 0.883 34 H 0.233 0.767 35 H 0.078 0.922 36 H 0.094 0.906 37 H 0.037 0.963 38 H 0.122 0.878 39 H 0.065 0.935 40 H 0.051 0.949 41 H 0.050 0.950 42 H 0.075 0.925 43 H 0.068 0.932 44 H 0.081 0.919 45 H 0.069 0.931 46 H 0.198 0.802 Dipole moment (debyes) X Y Z Total from point charges -9.030 -10.018 -10.147 16.878 hybrid contribution 0.662 2.137 0.040 2.237 sum -8.367 -7.881 -10.107 15.306 Atomic orbital electron populations 1.21812 0.74423 1.04481 1.03056 1.48352 1.06490 1.03892 1.57416 1.22247 0.90851 0.93269 1.01521 1.19440 0.93503 0.93678 1.16021 1.19905 0.95822 0.99915 0.94607 1.20654 0.80319 0.78411 0.91404 1.90684 1.53465 1.51509 1.46374 1.45961 1.29650 1.51601 1.09594 1.21655 0.96945 0.99414 0.82216 1.22293 0.84345 0.94606 0.98485 0.87604 1.20879 0.91428 0.92692 0.93192 1.44110 1.03394 1.06430 1.76938 1.19277 0.96586 0.85081 1.36804 0.91291 1.24888 0.98033 0.97945 0.98725 1.69877 1.06845 1.40110 1.38394 0.86258 0.77588 0.83105 0.79629 1.21473 1.20598 1.21857 1.20362 0.89227 0.95800 0.91414 1.23584 0.97255 0.99745 1.00769 1.22337 0.92806 0.92654 0.93241 1.87520 1.42452 1.31874 1.66903 1.23713 0.95133 0.94453 0.98996 1.77303 1.01668 1.08294 1.25094 0.90948 0.89429 0.89558 0.81140 0.88577 0.88282 0.76719 0.92210 0.90636 0.96256 0.87847 0.93513 0.94935 0.95026 0.92531 0.93188 0.91942 0.93104 0.80243 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 0.73 11.47 59.85 0.69 1.41 16 2 N -0.38 -4.43 4.01 -68.16 -0.27 -4.71 16 3 C 0.07 0.77 11.40 -17.22 -0.20 0.57 16 4 C -0.21 -2.67 4.59 -105.05 -0.48 -3.15 16 5 C -0.06 -0.67 6.18 -29.04 -0.18 -0.85 16 6 C 0.51 7.78 7.82 -10.99 -0.09 7.69 16 7 O -0.54 -10.65 16.03 5.56 0.09 -10.56 16 8 N -0.72 -11.05 5.43 -60.29 -0.33 -11.38 16 9 C 0.12 2.24 5.23 -4.04 -0.02 2.22 16 10 C 0.06 1.23 1.96 -29.40 -0.06 1.17 16 11 H 0.11 2.36 5.27 -51.93 -0.27 2.09 16 12 C 0.14 3.22 4.74 -4.68 -0.02 3.20 16 13 N -0.59 -13.98 2.60 -174.21 -0.45 -14.44 16 14 C -0.25 -6.41 9.62 -15.06 -0.14 -6.55 16 15 H 0.07 1.79 7.88 -52.49 -0.41 1.38 16 16 C 0.00 0.05 4.91 -17.43 -0.09 -0.04 16 17 N -0.91 -23.37 9.59 55.49 0.53 -22.84 16 18 Si 0.90 20.72 29.60 -169.99 -5.03 15.69 16 19 H -0.29 -6.69 7.11 56.52 0.40 -6.29 16 20 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 21 H -0.29 -6.78 7.11 56.52 0.40 -6.38 16 22 C 0.16 3.37 5.33 -4.44 -0.02 3.34 16 23 C -0.17 -3.16 6.75 -24.34 -0.16 -3.33 16 24 C 0.07 1.23 6.38 38.32 0.24 1.47 16 25 O -0.37 -7.06 9.53 -31.95 -0.30 -7.37 16 26 C 0.06 0.82 11.96 -17.36 -0.21 0.61 16 27 N -0.30 -4.20 12.58 30.62 0.39 -3.81 16 28 H 0.07 0.38 8.14 -51.93 -0.42 -0.04 16 29 H 0.09 0.58 8.14 -51.93 -0.42 0.16 16 30 H 0.09 0.43 8.14 -51.93 -0.42 0.01 16 31 H 0.17 1.46 8.06 -52.49 -0.42 1.04 16 32 H 0.10 0.84 8.14 -51.93 -0.42 0.42 16 33 H 0.10 0.87 8.14 -51.93 -0.42 0.45 16 34 H 0.40 5.39 8.32 -40.82 -0.34 5.05 16 35 H 0.06 1.14 8.14 -51.93 -0.42 0.72 16 36 H 0.08 1.49 8.14 -51.93 -0.42 1.06 16 37 H 0.02 0.42 8.14 -51.93 -0.42 0.00 16 38 H 0.10 2.56 6.02 -51.93 -0.31 2.25 16 39 H 0.25 6.49 8.31 -40.82 -0.34 6.15 16 40 H 0.03 0.67 7.96 -51.92 -0.41 0.26 16 41 H 0.03 0.65 7.97 -51.93 -0.41 0.23 16 42 H 0.06 1.04 8.14 -51.93 -0.42 0.62 16 43 H 0.05 0.81 8.14 -51.93 -0.42 0.39 16 44 H 0.06 1.28 6.66 -51.93 -0.35 0.93 16 45 H 0.05 0.79 8.14 -51.93 -0.42 0.37 16 46 H 0.18 1.88 8.06 -52.49 -0.42 1.45 16 LS Contribution 373.12 15.07 5.62 5.62 Total: -1.00 -32.07 373.12 -7.65 -39.71 By element: Atomic # 1 Polarization: 13.46 SS G_CDS: -7.14 Total: 6.32 kcal Atomic # 6 Polarization: 8.51 SS G_CDS: -0.74 Total: 7.77 kcal Atomic # 7 Polarization: -57.04 SS G_CDS: -0.14 Total: -57.18 kcal Atomic # 8 Polarization: -17.72 SS G_CDS: -0.22 Total: -17.93 kcal Atomic # 14 Polarization: 20.72 SS G_CDS: -5.03 Total: 15.69 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -32.07 -7.65 -39.71 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001149363497.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 70.375 kcal (2) G-P(sol) polarization free energy of solvation -32.065 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.309 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.646 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.711 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.663 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds