Wall clock time and date at job start Fri Apr 10 2020 18:32:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.34782 * 119.99782 * 2 1 4 4 O 1.21281 * 119.99948 * 184.63052 * 3 2 1 5 5 C 1.50694 * 119.99858 * 4.63076 * 3 2 1 6 6 H 1.09000 * 110.88908 * 328.65244 * 5 3 2 7 7 C 1.54628 * 110.96929 * 92.46270 * 5 3 2 8 8 C 1.51294 * 104.25860 * 142.69754 * 7 5 3 9 9 O 1.21278 * 124.94568 * 164.00892 * 8 7 5 10 10 N 1.34411 * 110.10832 * 344.14795 * 8 7 5 11 11 C 1.46503 * 124.34501 * 179.43621 * 10 8 7 12 12 C 1.53001 * 109.47195 * 239.69635 * 11 10 8 13 13 C 1.53006 * 109.46939 * 119.70116 * 11 10 8 14 14 C 1.53000 * 109.47241 * 359.69970 * 11 10 8 15 15 C 1.46763 * 111.30574 * 359.16921 * 10 8 7 16 16 C 1.46503 * 120.00252 * 180.02562 * 2 1 3 17 17 C 1.53937 * 113.74704 * 36.66767 * 16 2 1 18 18 N 1.47578 * 86.11995 * 222.05200 * 17 16 2 19 19 C 1.36936 * 134.48947 * 204.63962 * 18 17 16 20 20 H 1.08007 * 119.99387 * 179.97438 * 19 18 17 21 21 C 1.38803 * 120.00524 * 359.97438 * 19 18 17 22 22 N 1.31623 * 119.99753 * 359.97438 * 21 19 18 23 23 Si 1.86801 * 120.00390 * 179.97438 * 21 19 18 24 24 H 1.48508 * 109.46708 * 90.00156 * 23 21 19 25 25 H 1.48496 * 109.47493 * 209.99925 * 23 21 19 26 26 H 1.48499 * 109.46956 * 330.00323 * 23 21 19 27 27 C 1.47576 * 91.01531 * 24.63961 * 18 17 16 28 28 H 1.09002 * 109.47517 * 94.40993 * 1 2 3 29 29 H 1.09000 * 109.46670 * 214.40473 * 1 2 3 30 30 H 1.08995 * 109.47381 * 334.39830 * 1 2 3 31 31 H 1.09004 * 110.49039 * 261.59272 * 7 5 3 32 32 H 1.09004 * 110.48709 * 24.10730 * 7 5 3 33 33 H 1.09000 * 109.47455 * 300.00600 * 12 11 10 34 34 H 1.09003 * 109.46677 * 60.00155 * 12 11 10 35 35 H 1.09003 * 109.47272 * 179.97438 * 12 11 10 36 36 H 1.09003 * 109.46768 * 180.02562 * 13 11 10 37 37 H 1.08997 * 109.46996 * 299.99837 * 13 11 10 38 38 H 1.08997 * 109.47434 * 59.99947 * 13 11 10 39 39 H 1.09001 * 109.46967 * 299.99632 * 14 11 10 40 40 H 1.08997 * 109.47140 * 59.99891 * 14 11 10 41 41 H 1.09000 * 109.46917 * 179.97438 * 14 11 10 42 42 H 1.08995 * 110.24475 * 136.28467 * 15 10 8 43 43 H 1.09007 * 110.24584 * 258.19743 * 15 10 8 44 44 H 1.09002 * 112.94474 * 168.40353 * 16 2 1 45 45 H 1.09005 * 113.76989 * 336.35154 * 17 16 2 46 46 H 1.08998 * 113.77416 * 107.74187 * 17 16 2 47 47 H 0.97000 * 119.99757 * 179.97438 * 22 21 19 48 48 H 1.09000 * 113.76945 * 221.05977 * 27 18 17 49 49 H 1.09001 * 113.77109 * 89.66169 * 27 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1388 1.1673 0.0000 4 8 3.3487 1.1690 -0.0848 5 6 1.3890 2.4701 0.1054 6 1 0.4066 2.3919 -0.3604 7 6 1.2681 2.9214 1.5794 8 6 1.4173 4.4259 1.5219 9 8 1.1138 5.1887 2.4146 10 7 1.9323 4.7942 0.3363 11 6 2.1953 6.1812 -0.0556 12 6 1.3864 6.5190 -1.3095 13 6 3.6870 6.3540 -0.3491 14 6 1.7874 7.1188 1.0825 15 6 2.2032 3.6282 -0.5128 16 6 2.1975 -1.2687 -0.0006 17 6 1.5287 -2.3703 -0.8425 18 7 1.8683 -3.2839 0.2657 19 6 2.0739 -4.6339 0.3677 20 1 2.3192 -5.0719 1.3240 21 6 1.9672 -5.4393 -0.7577 22 7 1.6678 -4.9054 -1.9230 23 14 2.2483 -7.2808 -0.6186 24 1 0.9606 -7.9567 -0.3180 25 1 2.7907 -7.7970 -1.9009 26 1 3.2169 -7.5525 0.4738 27 6 1.8974 -2.1582 1.2196 28 1 -0.3634 -0.0790 -1.0246 29 1 -0.3633 -0.8479 0.5807 30 1 -0.3634 0.9267 0.4440 31 1 0.2937 2.6471 1.9837 32 1 2.0660 2.4835 2.1791 33 1 1.6769 5.8510 -2.1203 34 1 0.3237 6.3958 -1.1004 35 1 1.5817 7.5511 -1.6008 36 1 3.8827 7.3861 -0.6402 37 1 4.2633 6.1133 0.5442 38 1 3.9776 5.6861 -1.1599 39 1 0.7248 6.9957 1.2916 40 1 2.3638 6.8781 1.9758 41 1 1.9836 8.1507 0.7911 42 1 1.8718 3.8197 -1.5333 43 1 3.2672 3.3916 -0.5004 44 1 3.2615 -1.1449 -0.2023 45 1 0.4570 -2.2275 -0.9814 46 1 2.0533 -2.5926 -1.7717 47 1 1.5935 -5.4682 -2.7095 48 1 2.7164 -2.2112 1.9368 49 1 0.9340 -1.9530 1.6865 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001042842250.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 18:32:15 Heat of formation + Delta-G solvation = -0.703699 kcal Electronic energy + Delta-G solvation = -28415.406646 eV Core-core repulsion = 24572.981632 eV Total energy + Delta-G solvation = -3842.425014 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 323.200 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -41.25691 -39.73771 -37.82215 -36.93029 -35.64077 -34.57486 -32.07448 -30.72765 -28.21914 -27.84574 -27.65540 -27.27824 -26.72983 -24.87641 -24.28048 -22.38846 -21.66249 -19.62759 -18.87496 -18.51997 -17.74134 -16.89532 -16.74663 -16.15562 -15.68721 -15.27769 -15.24779 -14.78020 -14.33040 -14.21220 -14.06084 -13.92275 -13.76994 -13.64191 -13.32671 -12.83918 -12.58414 -12.53430 -12.41955 -12.33643 -12.16880 -11.93601 -11.89839 -11.66493 -11.59877 -11.56630 -11.36167 -11.28035 -11.24104 -10.93919 -10.74714 -10.31358 -10.12468 -9.80809 -9.62024 -9.45753 -8.87560 -8.86024 -8.25092 -6.97276 -5.84186 -3.17233 2.38950 2.54849 2.73072 3.13030 3.36203 3.41257 3.43065 4.03055 4.19971 4.39437 4.47257 4.52298 4.59325 4.68462 4.74225 4.87090 5.12945 5.15413 5.19706 5.23674 5.30749 5.34896 5.39525 5.40834 5.44340 5.45044 5.52462 5.56497 5.63902 5.67144 5.69966 5.76234 5.80916 5.98795 6.01758 6.07223 6.09371 6.36948 6.43022 6.50858 6.68100 6.92981 7.12627 7.25342 7.45642 7.63707 7.90169 8.00618 8.27394 8.97264 9.63181 10.49265 11.32993 Molecular weight = 323.20amu Principal moments of inertia in cm(-1) A = 0.034082 B = 0.002408 C = 0.002361 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 821.357207 B =11627.444616 C =11857.362404 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.073 3.927 2 N -0.594 5.594 3 C 0.523 3.477 4 O -0.539 6.539 5 C -0.126 4.126 6 H 0.112 0.888 7 C -0.140 4.140 8 C 0.524 3.476 9 O -0.529 6.529 10 N -0.608 5.608 11 C 0.173 3.827 12 C -0.158 4.158 13 C -0.159 4.159 14 C -0.140 4.140 15 C 0.115 3.885 16 C 0.089 3.911 17 C 0.158 3.842 18 N -0.606 5.606 19 C -0.223 4.223 20 H 0.082 0.918 21 C -0.007 4.007 22 N -0.921 5.921 23 Si 0.915 3.085 24 H -0.288 1.288 25 H -0.289 1.289 26 H -0.280 1.280 27 C 0.108 3.892 28 H 0.060 0.940 29 H 0.078 0.922 30 H 0.068 0.932 31 H 0.109 0.891 32 H 0.110 0.890 33 H 0.061 0.939 34 H 0.060 0.940 35 H 0.069 0.931 36 H 0.068 0.932 37 H 0.061 0.939 38 H 0.061 0.939 39 H 0.068 0.932 40 H 0.069 0.931 41 H 0.057 0.943 42 H 0.082 0.918 43 H 0.094 0.906 44 H 0.117 0.883 45 H 0.032 0.968 46 H 0.077 0.923 47 H 0.255 0.745 48 H 0.047 0.953 49 H 0.036 0.964 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.846 22.748 1.103 22.952 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 N -0.326 5.326 3 C 0.309 3.691 4 O -0.416 6.416 5 C -0.148 4.148 6 H 0.130 0.870 7 C -0.180 4.180 8 C 0.311 3.689 9 O -0.406 6.406 10 N -0.343 5.343 11 C 0.090 3.910 12 C -0.216 4.216 13 C -0.217 4.217 14 C -0.197 4.197 15 C -0.008 4.008 16 C -0.014 4.014 17 C 0.031 3.969 18 N -0.332 5.332 19 C -0.351 4.351 20 H 0.100 0.900 21 C -0.203 4.203 22 N -0.567 5.567 23 Si 0.745 3.255 24 H -0.215 1.215 25 H -0.215 1.215 26 H -0.205 1.205 27 C -0.019 4.019 28 H 0.079 0.921 29 H 0.097 0.903 30 H 0.086 0.914 31 H 0.127 0.873 32 H 0.128 0.872 33 H 0.080 0.920 34 H 0.079 0.921 35 H 0.088 0.912 36 H 0.087 0.913 37 H 0.080 0.920 38 H 0.080 0.920 39 H 0.087 0.913 40 H 0.088 0.912 41 H 0.075 0.925 42 H 0.100 0.900 43 H 0.112 0.888 44 H 0.134 0.866 45 H 0.050 0.950 46 H 0.095 0.905 47 H 0.065 0.935 48 H 0.065 0.935 49 H 0.053 0.947 Dipole moment (debyes) X Y Z Total from point charges -2.319 22.865 1.373 23.023 hybrid contribution -0.149 -1.253 -0.112 1.267 sum -2.468 21.612 1.261 21.789 Atomic orbital electron populations 1.21865 0.79780 1.02885 1.02451 1.48015 1.07005 1.06135 1.71428 1.20010 0.87715 0.84736 0.76655 1.90695 1.13947 1.87006 1.49998 1.22281 1.01261 0.93659 0.97565 0.86988 1.22299 1.06008 0.93816 0.95926 1.20703 0.76133 0.90463 0.81566 1.90726 1.51304 1.58082 1.40522 1.48431 1.63041 1.06217 1.16612 1.20481 0.95233 0.79748 0.95570 1.22191 1.00396 1.02081 0.96917 1.22200 0.94684 1.02344 1.02439 1.22096 1.03272 0.97114 0.97267 1.21989 1.01571 0.82840 0.94444 1.24099 0.98087 0.79677 0.99523 1.22612 0.96587 0.83552 0.94107 1.45653 1.81079 1.02112 1.04371 1.18990 1.41047 0.80138 0.94914 0.90024 1.24805 1.01772 0.98318 0.95431 1.69811 1.53966 1.34253 0.98718 0.86084 0.77813 0.84643 0.77003 1.21550 1.21549 1.20521 1.22978 0.98155 0.87236 0.93552 0.92097 0.90304 0.91364 0.87308 0.87230 0.92041 0.92089 0.91236 0.91313 0.92037 0.91959 0.91325 0.91200 0.92456 0.89950 0.88837 0.86561 0.95019 0.90493 0.93518 0.93470 0.94657 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.82 8.64 59.84 0.52 1.33 16 2 N -0.59 -8.60 3.09 -175.75 -0.54 -9.14 16 3 C 0.52 7.21 6.76 -10.99 -0.07 7.14 16 4 O -0.54 -9.39 15.17 5.56 0.08 -9.31 16 5 C -0.13 -1.22 2.57 -90.14 -0.23 -1.45 16 6 H 0.11 0.84 6.51 -51.93 -0.34 0.50 16 7 C -0.14 -1.38 6.34 -26.74 -0.17 -1.55 16 8 C 0.52 6.10 7.84 -10.86 -0.09 6.01 16 9 O -0.53 -7.63 13.99 5.56 0.08 -7.55 16 10 N -0.61 -6.03 2.76 -157.57 -0.43 -6.47 16 11 C 0.17 1.49 1.20 -131.81 -0.16 1.33 16 12 C -0.16 -1.07 8.49 37.16 0.32 -0.76 16 13 C -0.16 -1.22 8.54 37.16 0.32 -0.90 16 14 C -0.14 -1.32 7.00 37.16 0.26 -1.06 16 15 C 0.11 1.09 6.10 -3.12 -0.02 1.07 16 16 C 0.09 1.68 4.41 -70.15 -0.31 1.37 16 17 C 0.16 3.53 6.97 -2.98 -0.02 3.51 16 18 N -0.61 -15.13 3.70 -178.10 -0.66 -15.78 16 19 C -0.22 -6.15 10.70 -15.06 -0.16 -6.31 16 20 H 0.08 2.17 7.83 -52.48 -0.41 1.76 16 21 C -0.01 -0.18 5.50 -17.43 -0.10 -0.28 16 22 N -0.92 -26.70 11.38 55.49 0.63 -26.07 16 23 Si 0.91 21.79 29.55 -169.99 -5.02 16.77 16 24 H -0.29 -6.83 7.11 56.52 0.40 -6.43 16 25 H -0.29 -6.95 7.11 56.52 0.40 -6.55 16 26 H -0.28 -6.50 7.11 56.52 0.40 -6.10 16 27 C 0.11 2.15 8.48 -2.97 -0.03 2.12 16 28 H 0.06 0.65 8.09 -51.93 -0.42 0.23 16 29 H 0.08 0.97 6.56 -51.93 -0.34 0.63 16 30 H 0.07 0.54 6.04 -51.93 -0.31 0.22 16 31 H 0.11 0.89 8.14 -51.93 -0.42 0.47 16 32 H 0.11 1.18 7.89 -51.93 -0.41 0.77 16 33 H 0.06 0.39 7.21 -51.93 -0.37 0.02 16 34 H 0.06 0.44 8.14 -51.93 -0.42 0.02 16 35 H 0.07 0.38 8.14 -51.93 -0.42 -0.04 16 36 H 0.07 0.42 8.14 -51.93 -0.42 0.00 16 37 H 0.06 0.54 8.14 -51.93 -0.42 0.12 16 38 H 0.06 0.47 7.90 -51.93 -0.41 0.06 16 39 H 0.07 0.74 7.10 -51.93 -0.37 0.38 16 40 H 0.07 0.79 7.04 -51.93 -0.37 0.43 16 41 H 0.06 0.42 8.14 -51.93 -0.42 0.00 16 42 H 0.08 0.64 7.12 -51.93 -0.37 0.27 16 43 H 0.09 1.05 6.90 -51.93 -0.36 0.69 16 44 H 0.12 2.40 7.22 -51.93 -0.38 2.02 16 45 H 0.03 0.69 6.78 -51.93 -0.35 0.34 16 46 H 0.08 1.96 7.16 -51.93 -0.37 1.59 16 47 H 0.25 7.17 8.31 -40.82 -0.34 6.83 16 48 H 0.05 0.93 8.14 -51.93 -0.42 0.51 16 49 H 0.04 0.66 6.92 -51.93 -0.36 0.30 16 LS Contribution 380.07 15.07 5.73 5.73 Total: -1.00 -33.13 380.07 -8.11 -41.24 By element: Atomic # 1 Polarization: 7.05 SS G_CDS: -8.03 Total: -0.98 kcal Atomic # 6 Polarization: 11.51 SS G_CDS: 0.06 Total: 11.57 kcal Atomic # 7 Polarization: -56.46 SS G_CDS: -1.00 Total: -57.46 kcal Atomic # 8 Polarization: -17.02 SS G_CDS: 0.16 Total: -16.86 kcal Atomic # 14 Polarization: 21.79 SS G_CDS: -5.02 Total: 16.77 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -33.13 -8.11 -41.24 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001042842250.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.535 kcal (2) G-P(sol) polarization free energy of solvation -33.128 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.407 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.111 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.239 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.704 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds