Wall clock time and date at job start Fri Apr 10 2020 18:34:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46899 * 1 3 3 C 1.47842 * 111.00115 * 2 1 4 4 C 1.54903 * 104.80000 * 146.36436 * 3 2 1 5 5 C 1.55403 * 101.74106 * 323.01688 * 4 3 2 6 6 C 1.47445 * 110.99947 * 120.83945 * 2 1 3 7 7 H 1.08998 * 109.89157 * 117.17483 * 6 2 1 8 8 C 1.50702 * 109.89131 * 356.14756 * 6 2 1 9 9 O 1.21275 * 120.00064 * 311.16844 * 8 6 2 10 10 N 1.34779 * 120.00058 * 131.15940 * 8 6 2 11 11 C 1.46969 * 120.59318 * 186.98152 * 10 8 6 12 12 C 1.53364 * 108.63193 * 235.20692 * 11 10 8 13 13 N 1.46965 * 108.64041 * 310.57595 * 12 11 10 14 14 C 1.34779 * 120.59621 * 235.21104 * 13 12 11 15 15 O 1.21590 * 119.99811 * 5.69115 * 14 13 12 16 16 N 1.34769 * 119.99753 * 185.69386 * 14 13 12 17 17 C 1.46506 * 119.99625 * 175.04844 * 16 14 13 18 18 C 1.50704 * 109.46973 * 180.02562 * 17 16 14 19 19 H 1.08005 * 119.99821 * 359.97438 * 18 17 16 20 20 C 1.37882 * 120.00200 * 180.02562 * 18 17 16 21 21 N 1.31515 * 119.99635 * 359.97438 * 20 18 17 22 22 Si 1.86796 * 120.00285 * 179.97438 * 20 18 17 23 23 H 1.48494 * 109.47320 * 270.00230 * 22 20 18 24 24 H 1.48501 * 109.46951 * 30.00103 * 22 20 18 25 25 H 1.48495 * 109.47076 * 149.99590 * 22 20 18 26 26 C 1.46963 * 118.80924 * 55.47542 * 13 12 11 27 27 C 1.46962 * 120.59228 * 6.96145 * 10 8 6 28 28 H 1.09002 * 109.47200 * 308.29137 * 1 2 3 29 29 H 1.08995 * 109.46864 * 68.29451 * 1 2 3 30 30 H 1.09008 * 109.47294 * 188.29647 * 1 2 3 31 31 H 1.09004 * 110.37029 * 265.19428 * 3 2 1 32 32 H 1.09004 * 110.37324 * 27.42300 * 3 2 1 33 33 H 1.08996 * 110.99028 * 81.01721 * 4 3 2 34 34 H 1.08998 * 110.99318 * 204.83510 * 4 3 2 35 35 H 1.09002 * 110.67852 * 277.17664 * 5 4 3 36 36 H 1.09001 * 110.84800 * 153.86253 * 5 4 3 37 37 H 1.08997 * 109.60456 * 115.46386 * 11 10 8 38 38 H 1.09003 * 109.60694 * 354.94987 * 11 10 8 39 39 H 1.09006 * 109.60878 * 190.83202 * 12 11 10 40 40 H 1.09005 * 109.61408 * 70.32478 * 12 11 10 41 41 H 0.96998 * 120.00376 * 355.05191 * 16 14 13 42 42 H 1.08992 * 109.47325 * 60.00501 * 17 16 14 43 43 H 1.09004 * 109.47173 * 299.99720 * 17 16 14 44 44 H 0.97003 * 120.00168 * 0.02562 * 21 20 18 45 45 H 1.09008 * 109.60660 * 64.27259 * 26 13 12 46 46 H 1.08998 * 109.61045 * 184.77965 * 26 13 12 47 47 H 1.09002 * 109.61257 * 244.53414 * 27 10 8 48 48 H 1.08997 * 109.61326 * 5.04793 * 27 10 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9988 1.3802 0.0000 4 6 3.3047 1.3028 0.8296 5 6 2.9182 0.2790 1.9329 6 6 1.9974 -0.7057 1.1819 7 1 2.5673 -1.5800 0.8677 8 6 0.8611 -1.1290 2.0768 9 8 0.0014 -0.3308 2.3841 10 7 0.8002 -2.3949 2.5354 11 6 -0.3761 -2.8647 3.2807 12 6 0.0902 -3.4235 4.6307 13 7 1.1987 -4.3589 4.3942 14 6 1.1378 -5.6248 4.8528 15 8 0.1195 -6.0332 5.3770 16 7 2.2056 -6.4379 4.7305 17 6 2.1785 -7.7769 5.3245 18 6 3.4845 -8.4759 5.0472 19 1 4.2572 -7.9732 4.4844 20 6 3.6926 -9.7576 5.5110 21 7 2.7515 -10.3698 6.1959 22 14 5.3111 -10.6243 5.1667 23 1 5.2106 -11.3702 3.8866 24 1 6.4000 -9.6193 5.0699 25 1 5.6093 -11.5724 6.2700 26 6 2.3774 -3.8876 3.6537 27 6 1.9088 -3.3303 2.2988 28 1 -0.3634 0.6368 0.8066 29 1 -0.3633 0.3801 -0.9548 30 1 -0.3634 -1.0170 0.1483 31 1 2.2147 1.7038 -1.0183 32 1 1.2881 2.0596 0.4706 33 1 4.1301 0.9282 0.2243 34 1 3.5495 2.2720 1.2639 35 1 2.3782 0.7707 2.7422 36 1 3.8018 -0.2335 2.3134 37 1 -0.8790 -3.6485 2.7143 38 1 -1.0607 -2.0326 3.4460 39 1 -0.7342 -3.9479 5.1139 40 1 0.4304 -2.6065 5.2671 41 1 2.9920 -6.1367 4.2492 42 1 1.3597 -8.3505 4.8904 43 1 2.0330 -7.6937 6.4016 44 1 1.9108 -9.9199 6.3744 45 1 2.8767 -3.1028 4.2221 46 1 3.0639 -4.7185 3.4915 47 1 1.5686 -4.1474 1.6625 48 1 2.7331 -2.8059 1.8156 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000408369482.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 18:34:58 Heat of formation + Delta-G solvation = -28.696483 kcal Electronic energy + Delta-G solvation = -28567.046942 eV Core-core repulsion = 24657.982159 eV Total energy + Delta-G solvation = -3909.064783 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 324.195 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -41.29598 -39.87988 -38.22217 -36.89319 -34.59595 -34.09128 -32.65924 -32.40603 -31.58182 -29.87621 -28.00145 -26.39994 -25.89449 -24.22969 -23.42385 -22.68637 -21.73923 -21.50097 -19.89197 -18.98625 -18.39982 -17.48035 -16.68633 -16.49756 -16.16903 -15.80431 -15.55218 -15.39968 -15.31685 -14.54670 -14.29306 -14.23451 -13.86112 -13.79317 -13.62936 -13.35240 -13.17581 -12.70654 -12.63457 -12.30374 -12.22621 -11.99575 -11.93936 -11.81043 -11.75263 -11.54358 -11.46773 -11.36533 -11.17727 -10.98765 -10.80300 -10.23423 -10.20580 -9.62954 -9.36151 -8.82808 -8.74463 -8.60110 -8.41899 -7.92837 -6.54389 -4.28123 2.16396 2.49591 3.05146 3.35195 3.38424 3.54014 3.62712 3.67321 3.95053 4.17953 4.24130 4.33934 4.44666 4.54229 4.61818 4.68837 4.84714 4.94519 4.98120 5.01070 5.11894 5.16923 5.24810 5.25715 5.29984 5.34306 5.39490 5.44165 5.46541 5.53711 5.62344 5.64143 5.75152 5.80104 5.81440 6.15088 6.44494 6.51652 6.55838 6.82005 7.03192 7.21579 7.24981 7.35034 7.74062 7.79303 8.24558 8.54373 8.71606 9.12689 9.46082 10.85906 Molecular weight = 324.19amu Principal moments of inertia in cm(-1) A = 0.020517 B = 0.002590 C = 0.002384 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1364.388828 B =10806.598206 C =11739.856446 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.005 3.995 2 N -0.509 5.509 3 C 0.038 3.962 4 C -0.126 4.126 5 C -0.129 4.129 6 C 0.046 3.954 7 H 0.109 0.891 8 C 0.507 3.493 9 O -0.539 6.539 10 N -0.606 5.606 11 C 0.096 3.904 12 C 0.120 3.880 13 N -0.638 5.638 14 C 0.698 3.302 15 O -0.596 6.596 16 N -0.723 5.723 17 C 0.256 3.744 18 C -0.623 4.623 19 H 0.056 0.944 20 C 0.023 3.977 21 N -0.902 5.902 22 Si 1.079 2.921 23 H -0.286 1.286 24 H -0.288 1.288 25 H -0.282 1.282 26 C 0.100 3.900 27 C 0.089 3.911 28 H 0.068 0.932 29 H 0.062 0.938 30 H 0.060 0.940 31 H 0.084 0.916 32 H 0.052 0.948 33 H 0.079 0.921 34 H 0.078 0.922 35 H 0.076 0.924 36 H 0.084 0.916 37 H 0.074 0.926 38 H 0.101 0.899 39 H 0.106 0.894 40 H 0.065 0.935 41 H 0.388 0.612 42 H 0.016 0.984 43 H 0.014 0.986 44 H 0.273 0.727 45 H 0.072 0.928 46 H 0.095 0.905 47 H 0.080 0.920 48 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.387 23.709 -12.464 26.822 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 N -0.233 5.233 3 C -0.090 4.090 4 C -0.164 4.164 5 C -0.168 4.168 6 C -0.065 4.065 7 H 0.126 0.874 8 C 0.295 3.705 9 O -0.416 6.416 10 N -0.340 5.340 11 C -0.027 4.027 12 C -0.005 4.005 13 N -0.378 5.378 14 C 0.399 3.601 15 O -0.475 6.475 16 N -0.377 5.377 17 C 0.135 3.865 18 C -0.661 4.661 19 H 0.075 0.925 20 C -0.183 4.183 21 N -0.536 5.536 22 Si 0.906 3.094 23 H -0.213 1.213 24 H -0.214 1.214 25 H -0.208 1.208 26 C -0.025 4.025 27 C -0.035 4.035 28 H 0.086 0.914 29 H 0.081 0.919 30 H 0.079 0.921 31 H 0.103 0.897 32 H 0.070 0.930 33 H 0.098 0.902 34 H 0.097 0.903 35 H 0.095 0.905 36 H 0.102 0.898 37 H 0.092 0.908 38 H 0.120 0.880 39 H 0.124 0.876 40 H 0.083 0.917 41 H 0.223 0.777 42 H 0.034 0.966 43 H 0.032 0.968 44 H 0.084 0.916 45 H 0.090 0.910 46 H 0.113 0.887 47 H 0.098 0.902 48 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 1.147 22.080 -12.071 25.191 hybrid contribution -0.742 1.835 0.153 1.985 sum 0.405 23.915 -11.918 26.723 Atomic orbital electron populations 1.22984 0.86860 1.02495 1.01966 1.64091 1.09266 1.14795 1.35179 1.23161 0.95708 0.89310 1.00792 1.22741 0.97765 0.99353 0.96571 1.22799 0.99084 0.96517 0.98379 1.22798 0.94329 0.99535 0.89825 0.87380 1.21085 0.87426 0.81447 0.80567 1.90648 1.41661 1.51038 1.58264 1.48136 1.19505 1.11204 1.55112 1.22095 0.87760 1.00146 0.92702 1.21721 0.90945 0.92059 0.95758 1.47220 1.19486 1.10834 1.60287 1.16062 0.84521 0.80028 0.79450 1.90866 1.30909 1.74609 1.51126 1.45684 1.15762 1.17545 1.58709 1.19069 0.97758 0.76802 0.92902 1.22061 1.00711 1.02801 1.40529 0.92540 1.25876 1.04306 0.94586 0.93552 1.70724 1.06581 1.40323 1.35986 0.83406 0.73716 0.75615 0.76658 1.21260 1.21370 1.20782 1.22034 0.88493 1.00239 0.91759 1.22398 0.89872 0.93547 0.97695 0.91355 0.91911 0.92108 0.89736 0.93000 0.90198 0.90333 0.90524 0.89779 0.90765 0.88048 0.87618 0.91707 0.77725 0.96612 0.96797 0.91608 0.91017 0.88666 0.90199 0.88278 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.05 8.14 60.06 0.49 0.54 16 2 N -0.51 -4.74 5.44 -232.95 -1.27 -6.01 16 3 C 0.04 0.29 6.73 -2.30 -0.02 0.27 16 4 C -0.13 -0.77 7.08 -24.45 -0.17 -0.94 16 5 C -0.13 -0.93 6.48 -24.76 -0.16 -1.09 16 6 C 0.05 0.40 3.35 -67.87 -0.23 0.17 16 7 H 0.11 0.80 5.53 -51.93 -0.29 0.51 16 8 C 0.51 5.51 4.88 -10.98 -0.05 5.46 16 9 O -0.54 -7.30 13.01 5.56 0.07 -7.23 16 10 N -0.61 -6.31 2.95 -172.22 -0.51 -6.82 16 11 C 0.10 1.10 6.60 -3.60 -0.02 1.07 16 12 C 0.12 1.56 6.60 -3.60 -0.02 1.53 16 13 N -0.64 -9.41 2.94 -177.94 -0.52 -9.93 16 14 C 0.70 14.06 8.29 -86.92 -0.72 13.34 16 15 O -0.60 -14.47 15.76 5.29 0.08 -14.38 16 16 N -0.72 -15.12 5.46 -66.41 -0.36 -15.49 16 17 C 0.26 6.70 4.74 -5.19 -0.02 6.68 16 18 C -0.62 -16.78 9.28 -34.44 -0.32 -17.10 16 19 H 0.06 1.43 7.60 -52.48 -0.40 1.03 16 20 C 0.02 0.63 5.46 -17.82 -0.10 0.54 16 21 N -0.90 -27.03 13.65 55.43 0.76 -26.27 16 22 Si 1.08 23.99 29.90 -169.99 -5.08 18.91 16 23 H -0.29 -6.13 7.11 56.52 0.40 -5.73 16 24 H -0.29 -5.98 7.11 56.52 0.40 -5.57 16 25 H -0.28 -6.31 7.11 56.52 0.40 -5.91 16 26 C 0.10 1.05 6.59 -3.37 -0.02 1.03 16 27 C 0.09 0.78 6.40 -3.37 -0.02 0.76 16 28 H 0.07 0.80 5.71 -51.93 -0.30 0.51 16 29 H 0.06 0.56 8.14 -51.93 -0.42 0.13 16 30 H 0.06 0.68 6.96 -51.92 -0.36 0.32 16 31 H 0.08 0.55 8.14 -51.93 -0.42 0.13 16 32 H 0.05 0.42 7.64 -51.93 -0.40 0.02 16 33 H 0.08 0.43 8.14 -51.93 -0.42 0.01 16 34 H 0.08 0.40 8.14 -51.93 -0.42 -0.02 16 35 H 0.08 0.67 7.78 -51.93 -0.40 0.27 16 36 H 0.08 0.47 8.14 -51.93 -0.42 0.05 16 37 H 0.07 0.87 8.14 -51.93 -0.42 0.45 16 38 H 0.10 1.16 6.99 -51.93 -0.36 0.79 16 39 H 0.11 1.55 6.99 -51.93 -0.36 1.18 16 40 H 0.06 0.79 8.14 -51.93 -0.42 0.37 16 41 H 0.39 6.91 5.80 -40.82 -0.24 6.67 16 42 H 0.02 0.46 8.01 -51.93 -0.42 0.04 16 43 H 0.01 0.40 8.01 -51.93 -0.42 -0.01 16 44 H 0.27 8.32 7.22 -40.82 -0.29 8.02 16 45 H 0.07 0.68 8.14 -51.92 -0.42 0.25 16 46 H 0.10 0.98 5.62 -51.93 -0.29 0.69 16 47 H 0.08 0.74 8.14 -51.93 -0.42 0.32 16 48 H 0.10 0.60 5.33 -51.93 -0.28 0.32 16 LS Contribution 369.53 15.07 5.57 5.57 Total: -1.00 -34.50 369.53 -10.06 -44.56 By element: Atomic # 1 Polarization: 12.24 SS G_CDS: -7.40 Total: 4.84 kcal Atomic # 6 Polarization: 13.65 SS G_CDS: -1.39 Total: 12.25 kcal Atomic # 7 Polarization: -62.61 SS G_CDS: -1.91 Total: -64.52 kcal Atomic # 8 Polarization: -21.77 SS G_CDS: 0.16 Total: -21.61 kcal Atomic # 14 Polarization: 23.99 SS G_CDS: -5.08 Total: 18.91 kcal Total LS contribution 5.57 Total: 5.57 kcal Total: -34.50 -10.06 -44.56 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000408369482.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.865 kcal (2) G-P(sol) polarization free energy of solvation -34.500 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.635 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.062 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.562 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.696 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds