Wall clock time and date at job start Fri Apr 10 2020 20:19:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 H 1.08996 * 109.45768 * 2 1 4 4 N 1.46840 * 109.46295 * 240.02345 * 2 1 3 5 5 C 1.46851 * 111.20185 * 178.24151 * 4 2 1 6 6 C 1.53044 * 109.51876 * 61.74322 * 5 4 2 7 7 C 1.53118 * 109.27778 * 300.82374 * 6 5 4 8 8 C 1.53037 * 109.46220 * 119.97120 * 2 1 3 9 9 H 1.08996 * 109.53855 * 299.15514 * 8 2 1 10 10 C 1.50704 * 109.50467 * 59.25402 * 8 2 1 11 11 O 1.21288 * 119.99686 * 14.95052 * 10 8 2 12 12 N 1.34771 * 120.00499 * 194.94904 * 10 8 2 13 13 C 1.47087 * 120.87925 * 354.65271 * 12 10 8 14 14 C 1.53235 * 108.52172 * 128.79176 * 13 12 10 15 15 N 1.46904 * 109.33890 * 53.82833 * 14 13 12 16 16 C 1.46906 * 110.99687 * 172.74507 * 15 14 13 17 17 C 1.50705 * 109.46956 * 62.54405 * 16 15 14 18 18 H 1.07998 * 120.00141 * 354.64097 * 17 16 15 19 19 C 1.37880 * 119.99664 * 174.64370 * 17 16 15 20 20 N 1.31514 * 120.00139 * 359.97438 * 19 17 16 21 21 Si 1.86798 * 119.99807 * 179.97438 * 19 17 16 22 22 H 1.48508 * 109.47184 * 89.99607 * 21 19 17 23 23 H 1.48493 * 109.47246 * 209.99872 * 21 19 17 24 24 H 1.48502 * 109.46943 * 330.00055 * 21 19 17 25 25 C 1.46903 * 111.27118 * 296.89408 * 15 14 13 26 26 C 1.47080 * 120.88435 * 174.62679 * 12 10 8 27 27 H 1.09001 * 109.46899 * 300.02686 * 1 2 3 28 28 H 1.09000 * 109.46975 * 60.02443 * 1 2 3 29 29 H 1.08997 * 109.47202 * 180.02562 * 1 2 3 30 30 H 1.00899 * 111.00311 * 54.14573 * 4 2 1 31 31 H 1.08997 * 109.46301 * 301.72870 * 5 4 2 32 32 H 1.09000 * 109.45606 * 181.75375 * 5 4 2 33 33 H 1.08999 * 109.49745 * 180.87815 * 6 5 4 34 34 H 1.09002 * 109.53166 * 60.78653 * 6 5 4 35 35 H 1.08997 * 109.52098 * 297.75015 * 7 6 5 36 36 H 1.09001 * 109.57035 * 177.59541 * 7 6 5 37 37 H 1.09001 * 109.62728 * 9.08014 * 13 12 10 38 38 H 1.09000 * 109.62420 * 248.49851 * 13 12 10 39 39 H 1.08998 * 109.49573 * 173.78881 * 14 13 12 40 40 H 1.09002 * 109.49380 * 293.86969 * 14 13 12 41 41 H 1.09001 * 109.46696 * 182.54144 * 16 15 14 42 42 H 1.08997 * 109.47187 * 302.54299 * 16 15 14 43 43 H 0.96997 * 119.99960 * 179.97438 * 20 19 17 44 44 H 1.09001 * 109.49126 * 303.14568 * 25 15 14 45 45 H 1.08996 * 109.51508 * 183.07886 * 25 15 14 46 46 H 1.09005 * 109.62655 * 350.91932 * 26 12 10 47 47 H 1.09002 * 109.62738 * 111.49607 * 26 12 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8931 1.0277 0.0000 4 7 2.0193 -0.6918 -1.1993 5 6 3.4865 -0.6777 -1.2591 6 6 4.0548 -1.4189 -0.0466 7 6 3.5709 -0.7361 1.2356 8 6 2.0399 -0.7208 1.2500 9 1 1.6895 -0.1987 2.1403 10 6 1.5228 -2.1363 1.2607 11 8 1.0523 -2.6177 0.2517 12 7 1.5832 -2.8674 2.3912 13 6 2.2541 -2.3465 3.5921 14 6 1.2990 -2.4856 4.7823 15 7 0.8435 -3.8788 4.8802 16 6 0.0637 -4.0927 6.1067 17 6 -1.1751 -3.2351 6.0703 18 1 -1.3215 -2.5319 5.2638 19 6 -2.1213 -3.3482 7.0668 20 7 -1.9431 -4.2048 8.0486 21 14 -3.6563 -2.2847 7.0221 22 1 -4.7251 -2.9895 6.2695 23 1 -4.1178 -2.0230 8.4090 24 1 -3.3465 -0.9962 6.3520 25 6 0.0746 -4.2729 3.6921 26 6 0.9796 -4.2070 2.4572 27 1 -0.3633 0.5143 0.8898 28 1 -0.3633 0.5135 -0.8902 29 1 -0.3633 -1.0276 0.0005 30 1 1.6196 -0.2926 -2.0354 31 1 3.8404 0.3532 -1.2532 32 1 3.8173 -1.1701 -2.1735 33 1 5.1439 -1.3948 -0.0832 34 1 3.7130 -2.4539 -0.0591 35 1 3.9456 0.2870 1.2672 36 1 3.9380 -1.2854 2.1026 37 1 2.5050 -1.2961 3.4447 38 1 3.1617 -2.9196 3.7820 39 1 1.8178 -2.2073 5.6995 40 1 0.4394 -1.8313 4.6372 41 1 -0.2228 -5.1420 6.1767 42 1 0.6675 -3.8223 6.9729 43 1 -2.6086 -4.2841 8.7498 44 1 -0.7679 -3.5936 3.5623 45 1 -0.2948 -5.2906 3.8184 46 1 0.3878 -4.3866 1.5596 47 1 1.7647 -4.9588 2.5381 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000384299901.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 20:19:35 Heat of formation + Delta-G solvation = -24.430070 kcal Electronic energy + Delta-G solvation = -25735.945247 eV Core-core repulsion = 22339.399714 eV Total energy + Delta-G solvation = -3396.545534 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 295.200 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -40.57204 -38.32929 -36.82044 -34.41296 -32.85154 -32.44283 -32.02635 -30.47529 -28.18645 -27.12296 -25.39676 -24.07658 -23.18989 -22.38506 -21.78039 -21.04103 -19.62704 -18.11814 -17.02193 -16.36792 -16.08076 -15.55252 -15.29444 -14.81473 -14.46817 -14.38321 -14.32907 -14.13130 -13.69249 -13.52933 -13.21415 -13.13293 -12.51009 -12.47186 -12.22455 -11.94566 -11.85992 -11.79331 -11.49325 -11.15643 -11.06733 -10.96989 -10.90969 -10.66898 -10.58924 -10.54954 -10.41443 -10.21061 -9.91551 -9.66916 -9.20135 -8.47442 -8.27453 -8.22473 -7.24338 -6.07181 -4.16650 3.03660 3.24507 3.31682 3.33413 3.34098 4.07440 4.36993 4.51957 4.64373 4.69644 4.89829 4.93650 5.04542 5.22750 5.23205 5.29062 5.34231 5.41767 5.51885 5.52703 5.61519 5.64413 5.69050 5.72586 5.79582 5.80975 5.89529 5.97161 6.01572 6.09066 6.17465 6.18541 6.39281 6.46203 6.60957 6.76046 6.90854 7.06159 7.21186 7.36794 7.47076 7.78370 7.86147 7.98761 8.19907 8.23896 8.63589 8.93346 9.50722 10.97860 Molecular weight = 295.20amu Principal moments of inertia in cm(-1) A = 0.022975 B = 0.004112 C = 0.003818 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1218.424739 B = 6807.749839 C = 7332.089116 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C 0.109 3.891 3 H 0.038 0.962 4 N -0.664 5.664 5 C 0.062 3.938 6 C -0.119 4.119 7 C -0.114 4.114 8 C -0.105 4.105 9 H 0.093 0.907 10 C 0.523 3.477 11 O -0.513 6.513 12 N -0.613 5.613 13 C 0.109 3.891 14 C 0.048 3.952 15 N -0.540 5.540 16 C 0.187 3.813 17 C -0.551 4.551 18 H 0.056 0.944 19 C 0.066 3.934 20 N -0.890 5.890 21 Si 0.888 3.112 22 H -0.280 1.280 23 H -0.285 1.285 24 H -0.275 1.275 25 C 0.052 3.948 26 C 0.118 3.882 27 H 0.055 0.945 28 H 0.051 0.949 29 H 0.082 0.918 30 H 0.338 0.662 31 H 0.023 0.977 32 H 0.071 0.929 33 H 0.065 0.935 34 H 0.073 0.927 35 H 0.068 0.932 36 H 0.073 0.927 37 H 0.078 0.922 38 H 0.068 0.932 39 H 0.076 0.924 40 H 0.041 0.959 41 H 0.036 0.964 42 H 0.029 0.971 43 H 0.263 0.737 44 H 0.041 0.959 45 H 0.076 0.924 46 H 0.084 0.916 47 H 0.063 0.937 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.386 8.438 -14.585 20.337 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C -0.001 4.001 3 H 0.055 0.945 4 N -0.296 5.296 5 C -0.068 4.068 6 C -0.157 4.157 7 C -0.152 4.152 8 C -0.126 4.126 9 H 0.111 0.889 10 C 0.310 3.690 11 O -0.388 6.388 12 N -0.347 5.347 13 C -0.014 4.014 14 C -0.082 4.082 15 N -0.264 5.264 16 C 0.062 3.938 17 C -0.590 4.590 18 H 0.074 0.926 19 C -0.137 4.137 20 N -0.528 5.528 21 Si 0.716 3.284 22 H -0.206 1.206 23 H -0.211 1.211 24 H -0.200 1.200 25 C -0.078 4.078 26 C -0.004 4.004 27 H 0.074 0.926 28 H 0.070 0.930 29 H 0.101 0.899 30 H 0.157 0.843 31 H 0.041 0.959 32 H 0.090 0.910 33 H 0.084 0.916 34 H 0.092 0.908 35 H 0.087 0.913 36 H 0.092 0.908 37 H 0.096 0.904 38 H 0.087 0.913 39 H 0.094 0.906 40 H 0.060 0.940 41 H 0.054 0.946 42 H 0.047 0.953 43 H 0.072 0.928 44 H 0.060 0.940 45 H 0.095 0.905 46 H 0.103 0.897 47 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges 11.434 7.177 -14.654 19.924 hybrid contribution -1.510 2.090 0.109 2.581 sum 9.924 9.267 -14.544 19.897 Atomic orbital electron populations 1.21974 0.93995 1.04296 1.01058 1.21156 0.95625 0.93555 0.89789 0.94459 1.60171 1.06079 1.59402 1.03909 1.21864 0.88416 0.97783 0.98695 1.21598 0.99434 1.00835 0.93856 1.21635 0.93161 1.01435 0.98995 1.21486 0.96917 0.94870 0.99371 0.88884 1.20186 0.79011 0.87136 0.82676 1.90680 1.44695 1.71760 1.31664 1.48211 1.56650 1.17895 1.11988 1.21998 0.95977 0.98556 0.84884 1.22251 0.97473 0.91873 0.96574 1.62481 1.40830 1.19185 1.03898 1.19769 0.90771 0.97324 0.85959 1.21732 1.05644 1.22539 1.09052 0.92636 1.24950 0.98114 0.95262 0.95334 1.69937 1.35439 1.35396 1.12064 0.86661 0.83574 0.80883 0.77306 1.20583 1.21089 1.20017 1.22230 0.94617 1.01311 0.89600 1.21747 0.96819 0.82937 0.98934 0.92569 0.92976 0.89892 0.84326 0.95897 0.91033 0.91637 0.90839 0.91349 0.90802 0.90419 0.91339 0.90574 0.94042 0.94613 0.95340 0.92760 0.94036 0.90547 0.89721 0.91823 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -1.90 9.12 37.16 0.34 -1.56 16 2 C 0.11 1.25 2.63 -67.73 -0.18 1.07 16 3 H 0.04 0.38 8.14 -51.93 -0.42 -0.04 16 4 N -0.66 -7.66 5.02 -106.76 -0.54 -8.20 16 5 C 0.06 0.61 6.55 -3.83 -0.03 0.58 16 6 C -0.12 -1.24 5.84 -26.65 -0.16 -1.39 16 7 C -0.11 -1.15 5.16 -26.61 -0.14 -1.28 16 8 C -0.10 -1.26 1.70 -91.69 -0.16 -1.42 16 9 H 0.09 1.07 7.08 -51.93 -0.37 0.70 16 10 C 0.52 8.01 5.18 -10.99 -0.06 7.95 16 11 O -0.51 -9.24 12.78 5.55 0.07 -9.17 16 12 N -0.61 -9.54 3.01 -172.46 -0.52 -10.06 16 13 C 0.11 1.54 5.46 -3.60 -0.02 1.52 16 14 C 0.05 0.86 5.21 -3.70 -0.02 0.84 16 15 N -0.54 -11.07 4.83 -235.76 -1.14 -12.21 16 16 C 0.19 4.67 5.11 -4.97 -0.03 4.64 16 17 C -0.55 -14.79 7.75 -34.44 -0.27 -15.06 16 18 H 0.06 1.50 5.88 -52.49 -0.31 1.19 16 19 C 0.07 1.83 5.46 -17.82 -0.10 1.73 16 20 N -0.89 -25.77 13.29 55.43 0.74 -25.03 16 21 Si 0.89 21.25 29.54 -169.99 -5.02 16.23 16 22 H -0.28 -6.68 7.11 56.52 0.40 -6.28 16 23 H -0.29 -6.76 7.11 56.52 0.40 -6.36 16 24 H -0.28 -6.51 7.11 56.52 0.40 -6.11 16 25 C 0.05 1.00 5.19 -3.70 -0.02 0.98 16 26 C 0.12 1.97 6.58 -3.60 -0.02 1.94 16 27 H 0.06 0.65 8.14 -51.93 -0.42 0.23 16 28 H 0.05 0.55 8.14 -51.93 -0.42 0.12 16 29 H 0.08 1.27 6.02 -51.93 -0.31 0.96 16 30 H 0.34 3.38 8.79 -39.29 -0.35 3.04 16 31 H 0.02 0.20 8.14 -51.93 -0.42 -0.22 16 32 H 0.07 0.66 8.14 -51.93 -0.42 0.23 16 33 H 0.06 0.56 8.14 -51.93 -0.42 0.14 16 34 H 0.07 0.97 7.33 -51.93 -0.38 0.58 16 35 H 0.07 0.58 8.14 -51.93 -0.42 0.16 16 36 H 0.07 0.72 6.27 -51.93 -0.33 0.40 16 37 H 0.08 0.91 4.92 -51.93 -0.26 0.65 16 38 H 0.07 0.92 8.14 -51.93 -0.42 0.50 16 39 H 0.08 1.33 8.08 -51.93 -0.42 0.91 16 40 H 0.04 0.83 6.78 -51.93 -0.35 0.48 16 41 H 0.04 0.97 8.12 -51.93 -0.42 0.54 16 42 H 0.03 0.75 8.11 -51.93 -0.42 0.33 16 43 H 0.26 7.22 8.31 -40.82 -0.34 6.88 16 44 H 0.04 0.90 6.93 -51.93 -0.36 0.54 16 45 H 0.08 1.49 8.09 -51.93 -0.42 1.07 16 46 H 0.08 1.44 7.10 -51.93 -0.37 1.07 16 47 H 0.06 1.01 8.14 -51.93 -0.42 0.59 16 LS Contribution 347.80 15.07 5.24 5.24 Total: -1.00 -30.33 347.80 -10.01 -40.33 By element: Atomic # 1 Polarization: 10.31 SS G_CDS: -8.00 Total: 2.31 kcal Atomic # 6 Polarization: 1.40 SS G_CDS: -0.84 Total: 0.56 kcal Atomic # 7 Polarization: -54.05 SS G_CDS: -1.46 Total: -55.50 kcal Atomic # 8 Polarization: -9.24 SS G_CDS: 0.07 Total: -9.17 kcal Atomic # 14 Polarization: 21.25 SS G_CDS: -5.02 Total: 16.23 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -30.33 -10.01 -40.33 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000384299901.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.902 kcal (2) G-P(sol) polarization free energy of solvation -30.326 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.423 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.007 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.332 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.430 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds