Wall clock time and date at job start Fri Apr 10 2020 20:29:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 H 1.08998 * 109.47126 * 2 1 4 4 N 1.46499 * 109.46846 * 240.00528 * 2 1 3 5 5 C 1.34774 * 120.00436 * 85.00229 * 4 2 1 6 6 O 1.21558 * 119.99826 * 359.97438 * 5 4 2 7 7 C 1.47785 * 120.00590 * 179.97438 * 5 4 2 8 8 C 1.39617 * 120.12663 * 359.72220 * 7 5 4 9 9 C 1.37894 * 119.86821 * 179.79167 * 8 7 5 10 10 C 1.38518 * 120.12835 * 0.48425 * 9 8 7 11 11 Cl 1.73596 * 119.86723 * 179.72145 * 10 9 8 12 12 C 1.38510 * 120.26474 * 359.74474 * 10 9 8 13 13 C 1.37898 * 120.13113 * 0.02562 * 12 10 9 14 14 C 1.50700 * 109.47092 * 120.00550 * 2 1 3 15 15 O 1.21213 * 119.99758 * 119.99680 * 14 2 1 16 16 O 1.34307 * 119.99699 * 300.27419 * 14 2 1 17 17 C 1.34923 * 117.00000 * 179.72351 * 16 14 2 18 18 H 1.08007 * 119.99533 * 0.02562 * 17 16 14 19 19 C 1.38749 * 120.00389 * 179.97438 * 17 16 14 20 20 N 1.31439 * 120.00041 * 180.02562 * 19 17 16 21 21 Si 1.86799 * 119.99953 * 0.02562 * 19 17 16 22 22 H 1.48503 * 109.47417 * 89.99398 * 21 19 17 23 23 H 1.48498 * 109.47202 * 209.99921 * 21 19 17 24 24 H 1.48508 * 109.47195 * 329.99599 * 21 19 17 25 25 H 1.09006 * 109.47458 * 179.97438 * 1 2 3 26 26 H 1.09004 * 109.47239 * 299.99568 * 1 2 3 27 27 H 1.09005 * 109.47323 * 59.99789 * 1 2 3 28 28 H 0.97002 * 120.00224 * 264.99837 * 4 2 1 29 29 H 1.08007 * 120.06933 * 0.02562 * 8 7 5 30 30 H 1.08000 * 119.94108 * 180.23247 * 9 8 7 31 31 H 1.08000 * 119.93831 * 179.97438 * 12 10 9 32 32 H 1.08000 * 120.06698 * 179.97438 * 13 12 10 33 33 H 0.97005 * 119.99848 * 180.02562 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 7 2.0182 -0.6905 -1.1962 5 6 2.1470 -0.0181 -2.3572 6 8 1.8575 1.1612 -2.4118 7 6 2.6401 -0.7145 -3.5638 8 6 2.9788 -2.0676 -3.5027 9 6 3.4343 -2.7132 -4.6329 10 6 3.5655 -2.0194 -5.8246 11 17 4.1464 -2.8371 -7.2415 12 6 3.2355 -0.6758 -5.8902 13 6 2.7745 -0.0207 -4.7678 14 6 2.0323 -0.7105 1.2304 15 8 2.7291 -1.6961 1.1190 16 8 1.7033 -0.2550 2.4502 17 6 2.1812 -0.9404 3.5096 18 1 2.7988 -1.8127 3.3542 19 6 1.8802 -0.5241 4.7985 20 7 2.3462 -1.1916 5.8304 21 14 0.8125 0.9850 5.0671 22 1 -0.6139 0.5771 5.1320 23 1 1.1977 1.6433 6.3413 24 1 1.0051 1.9344 3.9415 25 1 -0.3634 -1.0277 -0.0005 26 1 -0.3634 0.5138 0.8900 27 1 -0.3634 0.5139 -0.8900 28 1 2.2490 -1.6317 -1.1528 29 1 2.8808 -2.6086 -2.5731 30 1 3.6931 -3.7607 -4.5879 31 1 3.3403 -0.1399 -6.8220 32 1 2.5179 1.0271 -4.8200 33 1 2.1354 -0.9008 6.7315 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000005220249.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 20:29:00 Heat of formation + Delta-G solvation = -95.480512 kcal Electronic energy + Delta-G solvation = -20636.576032 eV Core-core repulsion = 17074.722076 eV Total energy + Delta-G solvation = -3561.853955 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 297.060 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -40.54891 -39.47627 -38.53754 -36.78524 -35.94557 -34.64127 -32.46643 -31.99616 -31.38321 -29.99741 -25.94290 -24.74425 -23.44774 -22.96031 -20.69285 -20.01242 -18.58460 -18.12355 -17.09404 -16.42122 -16.20403 -15.50704 -15.35224 -14.98450 -14.85229 -14.61362 -14.14948 -13.94053 -13.73657 -13.49566 -12.85282 -12.54480 -12.51063 -12.30778 -11.98831 -11.92460 -11.78028 -11.45702 -11.24693 -11.18544 -10.59987 -10.43622 -10.10344 -9.80557 -9.48311 -9.44276 -9.20020 -9.01103 -8.77573 -6.46613 -4.23472 0.35248 0.89990 1.69330 2.56746 2.88458 3.00533 3.21158 3.25594 3.33882 3.49764 4.00617 4.17523 4.35847 4.45342 4.52461 4.85963 4.95670 4.99800 5.18472 5.29261 5.36713 5.53743 5.67063 5.74049 5.78369 5.89388 5.96449 6.10210 6.27289 6.31651 6.46497 7.44924 7.58201 7.92629 8.09855 8.44133 8.90117 9.51915 10.61177 Molecular weight = 297.06amu Principal moments of inertia in cm(-1) A = 0.035972 B = 0.002894 C = 0.002730 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 778.197083 B = 9672.260872 C =10254.805405 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C 0.159 3.841 3 H 0.117 0.883 4 N -0.703 5.703 5 C 0.561 3.439 6 O -0.536 6.536 7 C -0.125 4.125 8 C -0.071 4.071 9 C -0.117 4.117 10 C -0.014 4.014 11 Cl -0.067 7.067 12 C -0.120 4.120 13 C -0.047 4.047 14 C 0.403 3.597 15 O -0.539 6.539 16 O -0.240 6.240 17 C -0.384 4.384 18 H 0.111 0.889 19 C 0.069 3.931 20 N -0.870 5.870 21 Si 0.903 3.097 22 H -0.272 1.272 23 H -0.281 1.281 24 H -0.258 1.258 25 H 0.063 0.937 26 H 0.082 0.918 27 H 0.069 0.931 28 H 0.409 0.591 29 H 0.141 0.859 30 H 0.141 0.859 31 H 0.140 0.860 32 H 0.147 0.853 33 H 0.281 0.719 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.867 -0.178 -22.364 22.382 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.214 4.214 2 C 0.053 3.947 3 H 0.135 0.865 4 N -0.357 5.357 5 C 0.348 3.652 6 O -0.414 6.414 7 C -0.128 4.128 8 C -0.089 4.089 9 C -0.135 4.135 10 C -0.041 4.041 11 Cl -0.038 7.038 12 C -0.139 4.139 13 C -0.066 4.066 14 C 0.248 3.752 15 O -0.435 6.435 16 O -0.147 6.147 17 C -0.459 4.459 18 H 0.128 0.872 19 C -0.136 4.136 20 N -0.508 5.508 21 Si 0.728 3.272 22 H -0.197 1.197 23 H -0.206 1.206 24 H -0.181 1.181 25 H 0.082 0.918 26 H 0.101 0.899 27 H 0.088 0.912 28 H 0.248 0.752 29 H 0.159 0.841 30 H 0.159 0.841 31 H 0.158 0.842 32 H 0.165 0.835 33 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -0.837 0.322 -22.251 22.269 hybrid contribution -0.120 -0.108 0.289 0.331 sum -0.957 0.214 -21.963 21.985 Atomic orbital electron populations 1.22096 0.92523 1.03143 1.03660 1.20174 0.95660 0.97417 0.81410 0.86524 1.45721 1.66519 1.14977 1.08468 1.18093 0.77796 0.86425 0.82838 1.90780 1.50376 1.15254 1.85003 1.20057 1.03761 0.94431 0.94549 1.21425 0.95437 0.93407 0.98677 1.21031 1.00710 1.00962 0.90843 1.21216 1.00663 0.93421 0.88777 1.98387 1.86955 1.79046 1.39365 1.21051 1.00511 0.92572 0.99745 1.21255 0.94386 1.00764 0.90214 1.22734 0.82032 0.85066 0.85330 1.90585 1.38693 1.27335 1.86892 1.83489 1.64506 1.52880 1.13823 1.20655 1.32256 1.11563 0.81472 0.87156 1.24549 0.96916 0.98506 0.93641 1.69600 1.43062 1.39393 0.98759 0.86241 0.80344 0.82233 0.78351 1.19686 1.20624 1.18148 0.91833 0.89945 0.91241 0.75235 0.84117 0.84098 0.84180 0.83502 0.90848 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.30 9.41 37.16 0.35 -1.95 16 2 C 0.16 2.73 3.09 -69.08 -0.21 2.52 16 3 H 0.12 2.00 7.58 -51.93 -0.39 1.61 16 4 N -0.70 -10.47 4.90 -55.90 -0.27 -10.74 16 5 C 0.56 8.06 7.74 -12.36 -0.10 7.96 16 6 O -0.54 -9.02 16.01 5.31 0.09 -8.94 16 7 C -0.12 -1.44 5.87 -104.97 -0.62 -2.05 16 8 C -0.07 -0.69 9.54 -39.19 -0.37 -1.07 16 9 C -0.12 -1.02 9.81 -39.60 -0.39 -1.41 16 10 C -0.01 -0.12 6.33 -39.38 -0.25 -0.37 16 11 Cl -0.07 -0.54 28.95 -51.86 -1.50 -2.04 16 12 C -0.12 -1.03 9.81 -39.61 -0.39 -1.42 16 13 C -0.05 -0.47 9.59 -39.19 -0.38 -0.85 16 14 C 0.40 8.95 7.27 36.01 0.26 9.21 16 15 O -0.54 -13.16 15.07 -19.05 -0.29 -13.44 16 16 O -0.24 -6.05 8.47 -20.70 -0.18 -6.22 16 17 C -0.38 -11.02 10.10 30.92 0.31 -10.70 16 18 H 0.11 3.48 7.09 -52.48 -0.37 3.11 16 19 C 0.07 1.91 5.49 -17.53 -0.10 1.81 16 20 N -0.87 -25.10 13.96 55.48 0.77 -24.33 16 21 Si 0.90 20.75 28.62 -169.99 -4.86 15.89 16 22 H -0.27 -6.05 7.11 56.52 0.40 -5.65 16 23 H -0.28 -6.26 7.11 56.52 0.40 -5.86 16 24 H -0.26 -5.79 7.11 56.52 0.40 -5.39 16 25 H 0.06 0.90 8.14 -51.93 -0.42 0.47 16 26 H 0.08 1.23 8.11 -51.93 -0.42 0.81 16 27 H 0.07 0.94 8.14 -51.93 -0.42 0.51 16 28 H 0.41 5.70 5.82 -40.82 -0.24 5.46 16 29 H 0.14 1.24 6.40 -52.48 -0.34 0.90 16 30 H 0.14 0.98 8.06 -52.49 -0.42 0.56 16 31 H 0.14 0.90 8.06 -52.49 -0.42 0.48 16 32 H 0.15 1.41 7.65 -52.49 -0.40 1.01 16 33 H 0.28 7.40 8.31 -40.82 -0.34 7.07 16 LS Contribution 314.71 15.07 4.74 4.74 Total: -1.00 -31.97 314.71 -6.36 -38.33 By element: Atomic # 1 Polarization: 8.07 SS G_CDS: -2.99 Total: 5.08 kcal Atomic # 6 Polarization: 3.54 SS G_CDS: -1.87 Total: 1.67 kcal Atomic # 7 Polarization: -35.57 SS G_CDS: 0.50 Total: -35.07 kcal Atomic # 8 Polarization: -28.22 SS G_CDS: -0.38 Total: -28.60 kcal Atomic # 14 Polarization: 20.75 SS G_CDS: -4.86 Total: 15.89 kcal Atomic # 17 Polarization: -0.54 SS G_CDS: -1.50 Total: -2.04 kcal Total LS contribution 4.74 Total: 4.74 kcal Total: -31.97 -6.36 -38.33 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000005220249.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.153 kcal (2) G-P(sol) polarization free energy of solvation -31.966 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.119 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.361 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.327 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.481 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds