Wall clock time and date at job start Fri Apr 10 2020 20:36:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.38328 * 119.83623 * 2 1 4 4 C 1.38085 * 120.14047 * 180.02562 * 3 2 1 5 5 Cl 1.73606 * 120.09745 * 179.97438 * 4 3 2 6 6 C 1.39823 * 119.80725 * 0.25050 * 4 3 2 7 7 C 1.47619 * 120.16464 * 179.74780 * 6 4 3 8 8 O 1.21479 * 120.00012 * 56.78030 * 7 6 4 9 9 N 1.34784 * 119.99929 * 236.77896 * 7 6 4 10 10 C 1.46499 * 120.00148 * 355.75401 * 9 7 6 11 11 C 1.33321 * 119.99560 * 175.75998 * 9 7 6 12 12 H 1.08002 * 120.00545 * 2.86061 * 11 9 7 13 13 C 1.46785 * 119.99718 * 182.87203 * 11 9 7 14 14 N 1.29319 * 120.00375 * 5.22215 * 13 11 9 15 15 Si 1.86803 * 120.00107 * 185.22782 * 13 11 9 16 16 H 1.48506 * 109.47126 * 59.99787 * 15 13 11 17 17 H 1.48504 * 109.47209 * 179.97438 * 15 13 11 18 18 H 1.48500 * 109.46889 * 299.99737 * 15 13 11 19 19 C 1.39685 * 119.67021 * 359.47699 * 6 4 3 20 20 C 1.37909 * 119.85463 * 0.52479 * 19 6 4 21 21 N 1.48014 * 119.90061 * 179.76828 * 20 19 6 22 22 O 1.31704 * 120.00161 * 39.10490 * 21 20 19 23 23 O 1.31699 * 120.00205 * 219.09921 * 21 20 19 24 24 H 1.09005 * 109.47537 * 87.51952 * 1 2 3 25 25 H 1.09002 * 109.47502 * 207.52208 * 1 2 3 26 26 H 1.09004 * 109.46983 * 327.51944 * 1 2 3 27 27 H 1.08005 * 119.92855 * 0.02562 * 3 2 1 28 28 H 1.09006 * 109.46812 * 1.22577 * 10 9 7 29 29 H 1.08998 * 109.46999 * 121.21964 * 10 9 7 30 30 H 1.08996 * 109.47407 * 241.22123 * 10 9 7 31 31 H 0.96992 * 120.00438 * 180.02562 * 14 13 11 32 32 H 1.08004 * 120.06930 * 180.27401 * 19 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1952 1.1999 0.0000 4 6 3.5760 1.2073 -0.0005 5 17 4.4386 2.7139 -0.0012 6 6 4.2775 -0.0023 -0.0064 7 6 5.7537 -0.0036 -0.0126 8 8 6.3653 0.5701 0.8663 9 7 6.4228 -0.6414 -0.9935 10 6 5.6884 -1.4111 -2.0007 11 6 7.7532 -0.5719 -1.0469 12 1 8.2977 -0.0433 -0.2785 13 6 8.4778 -1.2136 -2.1504 14 7 7.8232 -1.7590 -3.1233 15 14 10.3456 -1.2427 -2.1494 16 1 10.8289 -1.9561 -0.9399 17 1 10.8304 -1.9452 -3.3647 18 1 10.8623 0.1495 -2.1426 19 6 3.5745 -1.2093 -0.0006 20 6 2.1954 -1.2006 -0.0001 21 7 1.4495 -2.4790 0.0009 22 8 1.8824 -3.4935 0.7207 23 8 0.3529 -2.6022 -0.7179 24 1 -0.3634 0.0445 -1.0267 25 1 -0.3634 -0.9114 0.4749 26 1 -0.3633 0.8669 0.5519 27 1 1.6513 2.1331 0.0004 28 1 4.6184 -1.3342 -1.8075 29 1 5.9080 -1.0148 -2.9920 30 1 5.9923 -2.4567 -1.9518 31 1 8.3020 -2.1833 -3.8523 32 1 4.1098 -2.1473 -0.0005 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000824856499.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 20:36:32 Heat of formation + Delta-G solvation = 36.015835 kcal Electronic energy + Delta-G solvation = -21773.248122 eV Core-core repulsion = 18151.670365 eV Total energy + Delta-G solvation = -3621.577757 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 298.055 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -40.56825 -38.86358 -37.81026 -36.43239 -34.96316 -34.46832 -33.10119 -32.08541 -31.61145 -28.31633 -26.46521 -26.27734 -24.56526 -22.85181 -22.13385 -20.09683 -18.15156 -17.98416 -17.30487 -16.70218 -16.46340 -15.99948 -15.24353 -14.97040 -14.59698 -14.16654 -14.05903 -13.81178 -13.04453 -13.00845 -12.74367 -12.50363 -12.35493 -11.88975 -11.65746 -11.57887 -11.29410 -11.19656 -11.10902 -10.98459 -10.80088 -10.68187 -10.55065 -10.38154 -9.40453 -9.25651 -8.97978 -8.55857 -8.40385 -6.77665 -3.87323 -0.54644 0.71118 0.87475 1.12344 2.08341 2.84777 3.02850 3.02988 3.07423 3.66678 3.83330 4.19753 4.25952 4.47296 4.65778 4.81737 4.91592 5.04610 5.19215 5.33267 5.39818 5.50554 5.69534 5.72901 5.84355 5.95752 6.01717 6.26863 6.69204 6.76615 6.87916 7.10123 7.67678 8.13233 8.84779 9.09050 9.78548 10.14273 Molecular weight = 298.06amu Principal moments of inertia in cm(-1) A = 0.016717 B = 0.005400 C = 0.004392 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1674.489827 B = 5183.971200 C = 6373.590134 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 C -0.027 4.027 3 C -0.112 4.112 4 C 0.032 3.968 5 Cl -0.023 7.023 6 C -0.067 4.067 7 C 0.426 3.574 8 O -0.581 6.581 9 N -0.390 5.390 10 C 0.089 3.911 11 C -0.328 4.328 12 H 0.118 0.882 13 C 0.040 3.960 14 N -0.835 5.835 15 Si 0.940 3.060 16 H -0.266 1.266 17 H -0.280 1.280 18 H -0.266 1.266 19 C -0.028 4.028 20 C -0.003 4.003 21 N -0.020 5.020 22 O -0.165 6.165 23 O -0.159 6.159 24 H 0.094 0.906 25 H 0.075 0.925 26 H 0.079 0.921 27 H 0.156 0.844 28 H 0.028 0.972 29 H 0.090 0.910 30 H 0.066 0.934 31 H 0.282 0.718 32 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.513 3.700 0.485 11.156 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C -0.030 4.030 3 C -0.131 4.131 4 C 0.003 3.997 5 Cl 0.006 6.994 6 C -0.073 4.073 7 C 0.216 3.784 8 O -0.468 6.468 9 N -0.102 5.102 10 C -0.054 4.054 11 C -0.458 4.458 12 H 0.135 0.865 13 C -0.173 4.173 14 N -0.468 5.468 15 Si 0.765 3.235 16 H -0.190 1.190 17 H -0.205 1.205 18 H -0.190 1.190 19 C -0.049 4.049 20 C -0.088 4.088 21 N 0.464 4.536 22 O -0.361 6.361 23 O -0.357 6.357 24 H 0.112 0.888 25 H 0.094 0.906 26 H 0.098 0.902 27 H 0.173 0.827 28 H 0.046 0.954 29 H 0.108 0.892 30 H 0.085 0.915 31 H 0.094 0.906 32 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -9.689 4.540 0.659 10.721 hybrid contribution 0.614 -0.533 -0.291 0.863 sum -9.076 4.007 0.368 9.928 Atomic orbital electron populations 1.21027 0.88441 1.03943 1.04408 1.19567 0.97617 0.89518 0.96270 1.20793 0.91553 0.97867 1.02909 1.21277 0.91972 0.88561 0.97878 1.98420 1.76739 1.28489 1.95711 1.20180 0.97202 0.90103 0.99835 1.16951 0.84115 0.89507 0.87794 1.90623 1.66860 1.50811 1.38546 1.42656 1.06809 1.38491 1.22229 1.22201 0.91639 0.97406 0.94157 1.20793 0.81083 1.34485 1.09393 0.86454 1.27010 1.01707 0.94718 0.93875 1.69113 1.38239 1.30654 1.08842 0.85764 0.80080 0.79424 0.78260 1.19039 1.20469 1.19050 1.21163 0.90045 1.00111 0.93543 1.20041 0.91279 0.81199 1.16282 1.50410 1.01278 1.03520 0.98364 1.96304 1.71902 1.29412 1.38441 1.96231 1.10246 1.90971 1.38249 0.88803 0.90630 0.90220 0.82655 0.95373 0.89182 0.91544 0.90561 0.82515 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 42. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.22 8.87 36.00 0.32 -0.90 16 2 C -0.03 -0.35 5.88 -104.53 -0.61 -0.97 16 3 C -0.11 -1.43 9.47 -39.60 -0.38 -1.80 16 4 C 0.03 0.53 6.35 -39.04 -0.25 0.28 16 5 Cl -0.02 -0.39 27.48 -51.86 -1.43 -1.82 16 6 C -0.07 -1.29 4.82 -104.94 -0.51 -1.80 16 7 C 0.43 10.07 6.44 -12.43 -0.08 9.99 16 8 O -0.58 -15.52 15.85 5.38 0.09 -15.44 16 9 N -0.39 -9.50 2.93 -121.79 -0.36 -9.86 16 10 C 0.09 1.92 8.21 59.85 0.49 2.41 16 11 C -0.33 -8.50 9.78 -13.45 -0.13 -8.63 16 12 H 0.12 3.20 7.20 -52.49 -0.38 2.83 16 13 C 0.04 0.94 5.61 -15.16 -0.09 0.86 16 14 N -0.83 -19.60 9.58 56.00 0.54 -19.07 16 15 Si 0.94 18.74 29.65 -169.99 -5.04 13.70 16 16 H -0.27 -5.33 7.11 56.52 0.40 -4.93 16 17 H -0.28 -5.38 7.11 56.52 0.40 -4.98 16 18 H -0.27 -5.32 7.11 56.52 0.40 -4.92 16 19 C -0.03 -0.49 7.07 -39.16 -0.28 -0.76 16 20 C 0.00 -0.05 6.50 -80.01 -0.52 -0.57 16 21 N -0.02 -0.32 4.53 33.93 0.15 -0.17 16 22 O -0.16 -2.94 19.73 -31.57 -0.62 -3.56 16 23 O -0.16 -2.55 17.39 -31.57 -0.55 -3.10 16 24 H 0.09 0.84 8.14 -51.93 -0.42 0.42 16 25 H 0.07 0.84 6.36 -51.93 -0.33 0.51 16 26 H 0.08 0.59 8.10 -51.93 -0.42 0.17 16 27 H 0.16 1.44 8.06 -52.48 -0.42 1.01 16 28 H 0.03 0.53 4.51 -51.93 -0.23 0.30 16 29 H 0.09 2.04 6.62 -51.93 -0.34 1.70 16 30 H 0.07 1.47 7.49 -51.93 -0.39 1.08 16 31 H 0.28 6.16 8.26 -40.82 -0.34 5.82 16 32 H 0.16 2.75 7.54 -52.48 -0.40 2.36 16 LS Contribution 299.76 15.07 4.52 4.52 Total: -1.00 -28.12 299.76 -7.20 -35.32 By element: Atomic # 1 Polarization: 3.83 SS G_CDS: -2.47 Total: 1.36 kcal Atomic # 6 Polarization: 0.13 SS G_CDS: -2.03 Total: -1.89 kcal Atomic # 7 Polarization: -29.43 SS G_CDS: 0.33 Total: -29.09 kcal Atomic # 8 Polarization: -21.01 SS G_CDS: -1.09 Total: -22.10 kcal Atomic # 14 Polarization: 18.74 SS G_CDS: -5.04 Total: 13.70 kcal Atomic # 17 Polarization: -0.39 SS G_CDS: -1.43 Total: -1.82 kcal Total LS contribution 4.52 Total: 4.52 kcal Total: -28.12 -7.20 -35.32 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000824856499.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.334 kcal (2) G-P(sol) polarization free energy of solvation -28.121 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.213 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.197 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.318 kcal (6) G-S(sol) free energy of system = (1) + (5) 36.016 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds