Wall clock time and date at job start Fri Apr 10 2020 20:38:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45203 * 109.47141 * 2 1 4 4 C 1.34641 * 117.00068 * 180.02562 * 3 2 1 5 5 O 1.21511 * 119.99869 * 359.97438 * 4 3 2 6 6 N 1.34771 * 119.99710 * 180.02562 * 4 3 2 7 7 C 1.46505 * 119.99622 * 180.02562 * 6 4 3 8 8 C 1.50703 * 109.47064 * 179.97438 * 7 6 4 9 9 O 1.21278 * 119.99985 * 359.97438 * 8 7 6 10 10 N 1.34777 * 120.00161 * 180.02562 * 8 7 6 11 11 C 1.46927 * 120.62638 * 359.71455 * 10 8 7 12 12 C 1.53627 * 108.54183 * 126.37295 * 11 10 8 13 13 C 1.53040 * 109.24108 * 54.85576 * 12 11 10 14 14 C 1.53000 * 109.46054 * 178.49243 * 13 12 11 15 15 C 1.50696 * 109.46924 * 295.06796 * 14 13 12 16 16 H 1.07993 * 120.00379 * 359.97438 * 15 14 13 17 17 C 1.37887 * 119.99958 * 180.02562 * 15 14 13 18 18 N 1.31512 * 120.00187 * 179.97438 * 17 15 14 19 19 Si 1.86798 * 119.99928 * 359.97438 * 17 15 14 20 20 H 1.48500 * 109.47400 * 89.99920 * 19 17 15 21 21 H 1.48495 * 109.47347 * 210.00524 * 19 17 15 22 22 H 1.48505 * 109.47257 * 330.00096 * 19 17 15 23 23 C 1.53042 * 109.53871 * 298.50936 * 13 12 11 24 24 C 1.46920 * 120.63268 * 180.02562 * 10 8 7 25 25 H 1.09003 * 109.47297 * 59.99608 * 1 2 3 26 26 H 1.08996 * 109.47074 * 179.97438 * 1 2 3 27 27 H 1.09006 * 109.47343 * 299.99978 * 1 2 3 28 28 H 1.08997 * 109.47200 * 240.00153 * 2 1 3 29 29 H 1.09003 * 109.46982 * 119.99945 * 2 1 3 30 30 H 0.96996 * 120.00772 * 359.97438 * 6 4 3 31 31 H 1.09002 * 109.47068 * 299.99729 * 7 6 4 32 32 H 1.09001 * 109.47372 * 59.99816 * 7 6 4 33 33 H 1.09005 * 109.58858 * 246.20434 * 11 10 8 34 34 H 1.08995 * 109.58867 * 6.63230 * 11 10 8 35 35 H 1.08999 * 109.63425 * 294.86802 * 12 11 10 36 36 H 1.09002 * 109.43315 * 174.72619 * 12 11 10 37 37 H 1.08998 * 109.45156 * 58.52626 * 13 12 11 38 38 H 1.09006 * 109.46937 * 55.06837 * 14 13 12 39 39 H 1.09004 * 109.47278 * 175.06625 * 14 13 12 40 40 H 0.96995 * 119.99747 * 179.97438 * 18 17 15 41 41 H 1.09000 * 109.50220 * 301.42045 * 23 13 12 42 42 H 1.08999 * 109.52344 * 181.33009 * 23 13 12 43 43 H 1.09001 * 109.58920 * 353.36599 * 24 10 8 44 44 H 1.09001 * 109.58884 * 113.65283 * 24 10 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3488 1.5454 -0.0005 5 8 4.0890 0.5818 -0.0005 6 7 3.8638 2.7908 0.0000 7 6 5.3163 2.9828 -0.0012 8 6 5.6281 4.4572 -0.0010 9 8 4.7260 5.2678 -0.0004 10 7 6.9095 4.8750 -0.0024 11 6 8.0130 3.9050 0.0021 12 6 8.9505 4.2262 -1.1718 13 6 9.3975 5.6867 -1.0753 14 6 10.3613 6.0016 -2.2211 15 6 11.6184 5.1867 -2.0583 16 1 11.7200 4.5121 -1.2212 17 6 12.6395 5.3033 -2.9776 18 7 13.7368 4.5925 -2.8353 19 14 12.4641 6.4707 -4.4252 20 1 12.9853 7.8091 -4.0479 21 1 13.2361 5.9465 -5.5803 22 1 11.0312 6.5848 -4.7984 23 6 8.1756 6.6033 -1.1705 24 6 7.2293 6.3090 -0.0017 25 1 -0.3634 0.5139 -0.8900 26 1 -0.3633 -1.0276 -0.0005 27 1 -0.3634 0.5138 0.8900 28 1 1.8933 -0.5138 -0.8900 29 1 1.8933 -0.5138 0.8900 30 1 3.2730 3.5601 0.0003 31 1 5.7446 2.5203 0.8881 32 1 5.7430 2.5216 -0.8919 33 1 8.5608 3.9790 0.9415 34 1 7.6142 2.8971 -0.1123 35 1 8.4254 4.0680 -2.1138 36 1 9.8234 3.5749 -1.1275 37 1 9.9006 5.8501 -0.1223 38 1 9.8886 5.7545 -3.1718 39 1 10.6112 7.0625 -2.2045 40 1 14.4549 4.6743 -3.4822 41 1 7.6577 6.4226 -2.1125 42 1 8.4965 7.6440 -1.1255 43 1 6.3131 6.8878 -0.1186 44 1 7.7123 6.5752 0.9385 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000496485921.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 20:38:43 Heat of formation + Delta-G solvation = -131.227057 kcal Electronic energy + Delta-G solvation = -24124.140822 eV Core-core repulsion = 20462.100988 eV Total energy + Delta-G solvation = -3662.039834 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 298.173 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -40.84720 -40.11475 -37.76792 -36.95757 -34.82509 -34.22992 -32.30941 -31.98637 -31.03608 -29.01867 -27.82707 -24.67674 -23.59807 -23.01309 -21.83900 -21.35987 -20.07026 -19.53640 -18.59256 -17.27004 -17.03792 -16.78171 -16.50157 -16.17775 -15.82612 -14.81662 -14.63432 -14.38013 -14.06301 -13.87975 -13.71865 -13.50866 -13.26397 -13.11060 -12.91456 -12.72368 -12.35237 -12.20207 -12.15538 -11.94515 -11.53573 -11.21656 -10.99201 -10.89243 -10.81855 -10.72101 -10.41433 -10.14203 -9.81697 -9.76572 -9.58324 -9.55128 -9.11926 -8.60297 -8.57076 -6.08131 -4.05876 1.76977 2.37460 2.58183 2.92688 3.27649 3.35996 3.38975 3.93013 4.20834 4.41872 4.60125 4.64185 4.93732 4.94506 5.00269 5.06517 5.20050 5.23428 5.24151 5.31044 5.35504 5.41881 5.52324 5.57907 5.59724 5.80414 5.86384 5.90140 6.14465 6.16405 6.20119 6.34296 6.47424 6.71536 6.78834 6.88617 7.12678 7.19263 7.28332 7.38802 7.75540 7.92017 8.07109 8.48937 8.96102 9.54902 11.04961 Molecular weight = 298.17amu Principal moments of inertia in cm(-1) A = 0.025187 B = 0.002640 C = 0.002515 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1111.420613 B =10604.551184 C =11129.818165 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.082 3.918 3 O -0.370 6.370 4 C 0.652 3.348 5 O -0.573 6.573 6 N -0.698 5.698 7 C 0.118 3.882 8 C 0.510 3.490 9 O -0.547 6.547 10 N -0.598 5.598 11 C 0.098 3.902 12 C -0.121 4.121 13 C -0.073 4.073 14 C -0.009 4.009 15 C -0.517 4.517 16 H 0.074 0.926 17 C 0.066 3.934 18 N -0.903 5.903 19 Si 0.878 3.122 20 H -0.278 1.278 21 H -0.289 1.289 22 H -0.266 1.266 23 C -0.132 4.132 24 C 0.113 3.887 25 H 0.067 0.933 26 H 0.082 0.918 27 H 0.067 0.933 28 H 0.072 0.928 29 H 0.071 0.929 30 H 0.418 0.582 31 H 0.103 0.897 32 H 0.105 0.895 33 H 0.075 0.925 34 H 0.081 0.919 35 H 0.060 0.940 36 H 0.093 0.907 37 H 0.066 0.934 38 H 0.015 0.985 39 H 0.012 0.988 40 H 0.263 0.737 41 H 0.061 0.939 42 H 0.072 0.928 43 H 0.087 0.913 44 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -22.390 -4.845 7.024 23.961 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C 0.007 3.993 3 O -0.284 6.284 4 C 0.404 3.596 5 O -0.462 6.462 6 N -0.360 5.360 7 C -0.008 4.008 8 C 0.297 3.703 9 O -0.426 6.426 10 N -0.330 5.330 11 C -0.025 4.025 12 C -0.159 4.159 13 C -0.092 4.092 14 C -0.047 4.047 15 C -0.555 4.555 16 H 0.092 0.908 17 C -0.135 4.135 18 N -0.542 5.542 19 Si 0.706 3.294 20 H -0.204 1.204 21 H -0.215 1.215 22 H -0.191 1.191 23 C -0.171 4.171 24 C -0.009 4.009 25 H 0.086 0.914 26 H 0.101 0.899 27 H 0.086 0.914 28 H 0.090 0.910 29 H 0.090 0.910 30 H 0.256 0.744 31 H 0.121 0.879 32 H 0.123 0.877 33 H 0.093 0.907 34 H 0.100 0.900 35 H 0.079 0.921 36 H 0.111 0.889 37 H 0.084 0.916 38 H 0.033 0.967 39 H 0.030 0.970 40 H 0.072 0.928 41 H 0.080 0.920 42 H 0.091 0.909 43 H 0.106 0.894 44 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -22.369 -4.977 6.942 23.944 hybrid contribution 0.072 0.784 -0.871 1.175 sum -22.297 -4.193 6.071 23.486 Atomic orbital electron populations 1.21838 0.92510 1.03101 1.03623 1.22981 0.94827 0.78511 1.02947 1.86244 1.21794 1.33418 1.86971 1.17907 0.81287 0.83956 0.76420 1.91021 1.59792 1.39666 1.55690 1.44235 1.07377 1.06316 1.78096 1.21096 0.79989 0.94289 1.05427 1.20284 0.83035 0.90287 0.76656 1.90676 1.45190 1.55470 1.51285 1.48113 1.05104 1.08353 1.71447 1.22177 0.88052 0.91366 1.00866 1.21998 0.98915 0.98723 0.96228 1.21021 0.94144 0.92951 1.01069 1.19618 0.94893 0.96527 0.93641 1.21121 0.98756 1.24360 1.11265 0.90811 1.25035 0.95166 0.95546 0.97795 1.69907 1.06434 1.41155 1.36706 0.86811 0.78532 0.81445 0.82655 1.20388 1.21483 1.19096 1.22080 0.96750 1.00646 0.97581 1.21718 1.00037 0.79840 0.99298 0.91406 0.89925 0.91432 0.91007 0.91048 0.74378 0.87877 0.87692 0.90655 0.90037 0.92133 0.88879 0.91599 0.96662 0.97004 0.92763 0.91977 0.90939 0.89437 0.91309 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.82 10.29 37.16 0.38 -0.44 16 2 C 0.08 0.67 6.19 37.16 0.23 0.90 16 3 O -0.37 -4.01 10.27 -40.33 -0.41 -4.42 16 4 C 0.65 8.15 8.75 54.05 0.47 8.62 16 5 O -0.57 -8.55 16.13 -19.28 -0.31 -8.86 16 6 N -0.70 -7.94 5.53 -66.46 -0.37 -8.31 16 7 C 0.12 1.29 4.50 -5.19 -0.02 1.26 16 8 C 0.51 6.51 7.77 -10.98 -0.09 6.42 16 9 O -0.55 -8.30 15.08 5.56 0.08 -8.22 16 10 N -0.60 -7.55 2.97 -172.47 -0.51 -8.06 16 11 C 0.10 1.17 6.37 -3.48 -0.02 1.15 16 12 C -0.12 -1.89 5.21 -26.39 -0.14 -2.03 16 13 C -0.07 -1.27 2.10 -90.58 -0.19 -1.46 16 14 C -0.01 -0.21 3.52 -27.88 -0.10 -0.31 16 15 C -0.52 -13.76 8.94 -34.44 -0.31 -14.07 16 16 H 0.07 2.08 7.30 -52.49 -0.38 1.70 16 17 C 0.07 1.85 5.47 -17.82 -0.10 1.75 16 18 N -0.90 -27.04 13.96 55.43 0.77 -26.26 16 19 Si 0.88 21.24 27.47 -169.99 -4.67 16.57 16 20 H -0.28 -6.64 7.11 56.52 0.40 -6.24 16 21 H -0.29 -6.99 7.11 56.52 0.40 -6.59 16 22 H -0.27 -6.21 6.54 56.52 0.37 -5.84 16 23 C -0.13 -1.94 5.36 -26.59 -0.14 -2.08 16 24 C 0.11 1.46 6.43 -3.69 -0.02 1.44 16 25 H 0.07 0.36 8.14 -51.93 -0.42 -0.06 16 26 H 0.08 0.29 8.14 -51.93 -0.42 -0.14 16 27 H 0.07 0.35 8.14 -51.93 -0.42 -0.07 16 28 H 0.07 0.58 8.14 -51.93 -0.42 0.16 16 29 H 0.07 0.56 8.14 -51.93 -0.42 0.14 16 30 H 0.42 4.60 7.55 -40.82 -0.31 4.29 16 31 H 0.10 1.00 7.93 -51.93 -0.41 0.59 16 32 H 0.11 1.10 7.70 -51.93 -0.40 0.70 16 33 H 0.08 0.85 8.14 -51.93 -0.42 0.42 16 34 H 0.08 0.80 5.93 -51.93 -0.31 0.50 16 35 H 0.06 0.97 8.14 -51.93 -0.42 0.54 16 36 H 0.09 1.64 6.91 -51.93 -0.36 1.28 16 37 H 0.07 1.17 8.14 -51.93 -0.42 0.74 16 38 H 0.02 0.34 7.20 -51.93 -0.37 -0.03 16 39 H 0.01 0.26 7.57 -51.93 -0.39 -0.13 16 40 H 0.26 7.42 8.31 -40.82 -0.34 7.08 16 41 H 0.06 0.95 8.14 -51.93 -0.42 0.53 16 42 H 0.07 1.01 8.14 -51.93 -0.42 0.59 16 43 H 0.09 1.16 7.01 -51.93 -0.36 0.79 16 44 H 0.07 0.82 8.14 -51.93 -0.42 0.39 16 LS Contribution 356.02 15.07 5.37 5.37 Total: -1.00 -32.49 356.02 -7.21 -39.70 By element: Atomic # 1 Polarization: 8.48 SS G_CDS: -7.12 Total: 1.36 kcal Atomic # 6 Polarization: 1.18 SS G_CDS: -0.04 Total: 1.14 kcal Atomic # 7 Polarization: -42.53 SS G_CDS: -0.11 Total: -42.63 kcal Atomic # 8 Polarization: -20.86 SS G_CDS: -0.64 Total: -21.50 kcal Atomic # 14 Polarization: 21.24 SS G_CDS: -4.67 Total: 16.57 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -32.49 -7.21 -39.70 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000496485921.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.531 kcal (2) G-P(sol) polarization free energy of solvation -32.486 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -124.016 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.211 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.697 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.227 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds