Wall clock time and date at job start Fri Apr 10 2020 20:52:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 N 1.46492 * 109.47371 * 2 1 4 4 C 1.46501 * 119.99851 * 277.52151 * 3 2 1 5 5 C 1.50697 * 109.47510 * 269.99882 * 4 3 2 6 6 H 1.07997 * 119.99688 * 359.97438 * 5 4 3 7 7 C 1.37873 * 120.00211 * 179.97438 * 5 4 3 8 8 N 1.31512 * 120.00017 * 0.02562 * 7 5 4 9 9 Si 1.86800 * 120.00168 * 179.97438 * 7 5 4 10 10 H 1.48504 * 109.46858 * 59.99847 * 9 7 5 11 11 H 1.48494 * 109.47625 * 180.02562 * 9 7 5 12 12 H 1.48507 * 109.47237 * 300.00446 * 9 7 5 13 13 C 1.34780 * 120.00154 * 97.52021 * 3 2 1 14 14 O 1.21556 * 119.99849 * 185.75794 * 13 3 2 15 15 C 1.47848 * 120.00002 * 5.76617 * 13 3 2 16 16 C 1.39565 * 120.12890 * 314.30984 * 15 13 3 17 17 C 1.38079 * 119.86673 * 179.97438 * 16 15 13 18 18 Cl 1.73604 * 119.93672 * 179.97438 * 17 16 15 19 19 C 1.38449 * 120.13246 * 0.02562 * 17 16 15 20 20 C 1.38451 * 120.26672 * 359.95644 * 19 17 16 21 21 Cl 1.73600 * 119.93495 * 180.02562 * 20 19 17 22 22 C 1.38084 * 120.13059 * 0.04049 * 20 19 17 23 23 H 1.09002 * 109.47220 * 69.42426 * 1 2 3 24 24 H 1.09002 * 109.47058 * 189.42431 * 1 2 3 25 25 H 1.09000 * 109.47269 * 309.42348 * 1 2 3 26 26 H 1.09001 * 109.47381 * 239.99557 * 2 1 3 27 27 H 1.08999 * 109.47017 * 120.00060 * 2 1 3 28 28 H 1.09001 * 109.47526 * 30.00117 * 4 3 2 29 29 H 1.09003 * 109.46877 * 149.99747 * 4 3 2 30 30 H 0.97000 * 119.99967 * 179.97438 * 8 7 5 31 31 H 1.08000 * 120.06669 * 359.70643 * 16 15 13 32 32 H 1.08001 * 119.86815 * 179.97438 * 19 17 16 33 33 H 1.08000 * 120.06605 * 179.97438 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3811 0.0000 4 6 2.1060 2.1271 -1.2578 5 6 3.4640 1.9133 -1.8752 6 1 4.1894 1.2850 -1.3799 7 6 3.7803 2.5198 -3.0722 8 7 2.8970 3.2853 -3.6751 9 14 5.4639 2.2555 -3.8371 10 1 5.6646 0.8085 -4.1040 11 1 5.5527 3.0115 -5.1121 12 1 6.5132 2.7366 -2.9028 13 6 2.3870 1.9656 1.1572 14 8 2.6923 3.1420 1.1736 15 6 2.4203 1.1757 2.4065 16 6 1.3577 0.3304 2.7294 17 6 1.3947 -0.4052 3.8974 18 17 0.0736 -1.4567 4.3012 19 6 2.4827 -0.3051 4.7477 20 6 3.5400 0.5314 4.4326 21 17 4.9003 0.6498 5.5046 22 6 3.5145 1.2720 3.2674 23 1 -0.3634 0.3612 -0.9621 24 1 -0.3633 -1.0138 0.1683 25 1 -0.3634 0.6526 0.7938 26 1 1.8934 -0.5139 -0.8899 27 1 1.8933 -0.5138 0.8900 28 1 1.3356 1.7747 -1.9437 29 1 1.9592 3.1891 -1.0613 30 1 3.1197 3.7123 -4.5171 31 1 0.5063 0.2551 2.0693 32 1 2.5070 -0.8821 5.6603 33 1 4.3396 1.9245 3.0228 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000042454249.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 20:52:38 Heat of formation + Delta-G solvation = -18.417046 kcal Electronic energy + Delta-G solvation = -19772.316785 eV Core-core repulsion = 16464.057665 eV Total energy + Delta-G solvation = -3308.259120 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 301.038 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -40.29606 -38.36798 -36.96797 -36.35546 -35.58087 -32.96906 -31.34059 -30.96299 -30.11875 -27.33532 -24.31869 -23.15755 -22.96496 -22.20258 -19.24898 -17.40042 -16.77163 -16.47971 -16.14841 -15.46395 -15.33993 -14.69958 -14.46753 -14.10425 -13.89927 -13.47050 -13.15964 -12.58373 -12.50120 -12.30601 -12.10676 -11.83065 -11.66610 -11.35945 -11.30609 -11.21195 -11.13050 -10.93425 -10.79019 -10.59554 -10.19957 -9.73888 -9.32053 -9.03563 -8.89781 -8.48154 -7.81641 -6.09776 -4.15257 0.65544 0.79284 1.58004 2.03385 2.93891 3.29175 3.33949 3.35443 3.49101 3.77878 4.38794 4.50647 4.67767 4.77380 4.93060 5.16861 5.19219 5.24621 5.27985 5.50413 5.59315 5.78139 5.83094 5.92997 6.03298 6.16411 6.24883 6.42217 6.95977 7.34612 7.41394 7.85636 8.15397 8.22561 8.74654 8.92161 9.50074 10.98309 Molecular weight = 301.04amu Principal moments of inertia in cm(-1) A = 0.015890 B = 0.004556 C = 0.003800 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1761.702554 B = 6143.788350 C = 7367.120281 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.094 3.906 3 N -0.584 5.584 4 C 0.245 3.755 5 C -0.532 4.532 6 H 0.058 0.942 7 C 0.064 3.936 8 N -0.893 5.893 9 Si 0.898 3.102 10 H -0.276 1.276 11 H -0.286 1.286 12 H -0.276 1.276 13 C 0.548 3.452 14 O -0.527 6.527 15 C -0.085 4.085 16 C -0.093 4.093 17 C -0.031 4.031 18 Cl -0.058 7.058 19 C -0.093 4.093 20 C -0.029 4.029 21 Cl -0.056 7.056 22 C -0.058 4.058 23 H 0.068 0.932 24 H 0.065 0.935 25 H 0.056 0.944 26 H 0.085 0.915 27 H 0.073 0.927 28 H 0.036 0.964 29 H 0.047 0.953 30 H 0.265 0.735 31 H 0.159 0.841 32 H 0.145 0.855 33 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.970 -10.633 15.905 19.539 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C -0.030 4.030 3 N -0.315 5.315 4 C 0.127 3.873 5 C -0.570 4.570 6 H 0.076 0.924 7 C -0.139 4.139 8 N -0.531 5.531 9 Si 0.726 3.274 10 H -0.202 1.202 11 H -0.211 1.211 12 H -0.201 1.201 13 C 0.333 3.667 14 O -0.405 6.405 15 C -0.089 4.089 16 C -0.112 4.112 17 C -0.058 4.058 18 Cl -0.029 7.029 19 C -0.113 4.113 20 C -0.056 4.056 21 Cl -0.027 7.027 22 C -0.078 4.078 23 H 0.087 0.913 24 H 0.084 0.916 25 H 0.075 0.925 26 H 0.103 0.897 27 H 0.091 0.909 28 H 0.054 0.946 29 H 0.065 0.935 30 H 0.074 0.926 31 H 0.176 0.824 32 H 0.163 0.837 33 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -3.841 -9.964 15.818 19.086 hybrid contribution 0.935 -0.302 -0.350 1.043 sum -2.906 -10.267 15.468 18.791 Atomic orbital electron populations 1.22355 0.96493 1.01641 1.02876 1.21709 0.93796 0.84211 1.03292 1.48219 1.61420 1.13434 1.08377 1.19362 0.97254 0.92842 0.77856 1.21372 0.99414 1.30314 1.05940 0.92420 1.24917 0.97369 0.94789 0.96826 1.69916 1.34597 1.31110 1.17526 0.86553 0.84189 0.78216 0.78449 1.20198 1.21118 1.20131 1.17952 0.79033 0.86873 0.82823 1.90796 1.48727 1.15345 1.85589 1.20186 0.94550 0.97471 0.96740 1.21953 0.99903 0.93755 0.95580 1.20580 0.91189 0.97720 0.96351 1.98383 1.46228 1.64721 1.93577 1.20964 0.91425 0.98717 1.00151 1.20578 0.90895 1.00541 0.93615 1.98386 1.43052 1.97364 1.63946 1.21229 0.98529 0.96978 0.91044 0.91318 0.91620 0.92486 0.89673 0.90925 0.94556 0.93487 0.92561 0.82371 0.83725 0.83340 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.24 9.15 37.16 0.34 -1.90 16 2 C 0.09 1.46 5.60 -4.05 -0.02 1.43 16 3 N -0.58 -11.94 2.46 -176.18 -0.43 -12.37 16 4 C 0.25 6.20 5.22 -5.19 -0.03 6.17 16 5 C -0.53 -14.65 9.39 -34.44 -0.32 -14.97 16 6 H 0.06 1.58 7.81 -52.49 -0.41 1.17 16 7 C 0.06 1.77 5.46 -17.82 -0.10 1.68 16 8 N -0.89 -25.95 13.29 55.43 0.74 -25.21 16 9 Si 0.90 21.43 29.54 -169.99 -5.02 16.41 16 10 H -0.28 -6.41 7.11 56.52 0.40 -6.00 16 11 H -0.29 -6.72 7.11 56.52 0.40 -6.32 16 12 H -0.28 -6.61 7.11 56.52 0.40 -6.21 16 13 C 0.55 11.25 7.27 -12.33 -0.09 11.16 16 14 O -0.53 -13.05 16.54 5.32 0.09 -12.96 16 15 C -0.09 -1.35 5.08 -104.98 -0.53 -1.89 16 16 C -0.09 -1.21 7.19 -39.15 -0.28 -1.49 16 17 C -0.03 -0.35 6.31 -39.56 -0.25 -0.60 16 18 Cl -0.06 -0.57 28.95 -51.86 -1.50 -2.07 16 19 C -0.09 -1.00 9.60 -39.43 -0.38 -1.38 16 20 C -0.03 -0.36 6.31 -39.56 -0.25 -0.60 16 21 Cl -0.06 -0.62 28.95 -51.86 -1.50 -2.12 16 22 C -0.06 -0.85 9.47 -39.15 -0.37 -1.22 16 23 H 0.07 0.95 8.14 -51.93 -0.42 0.53 16 24 H 0.06 0.65 8.14 -51.93 -0.42 0.23 16 25 H 0.06 0.71 6.32 -51.93 -0.33 0.38 16 26 H 0.08 1.37 8.13 -51.93 -0.42 0.95 16 27 H 0.07 0.99 5.10 -51.93 -0.26 0.73 16 28 H 0.04 0.92 8.07 -51.93 -0.42 0.50 16 29 H 0.05 1.34 7.35 -51.93 -0.38 0.96 16 30 H 0.26 7.29 8.31 -40.82 -0.34 6.95 16 31 H 0.16 1.93 3.72 -52.49 -0.20 1.74 16 32 H 0.14 1.23 8.06 -52.49 -0.42 0.81 16 33 H 0.15 2.22 8.06 -52.49 -0.42 1.80 16 LS Contribution 314.30 15.07 4.74 4.74 Total: -1.00 -30.56 314.30 -8.43 -38.98 By element: Atomic # 1 Polarization: 1.47 SS G_CDS: -3.25 Total: -1.78 kcal Atomic # 6 Polarization: -1.34 SS G_CDS: -2.28 Total: -3.62 kcal Atomic # 7 Polarization: -37.89 SS G_CDS: 0.30 Total: -37.58 kcal Atomic # 8 Polarization: -13.05 SS G_CDS: 0.09 Total: -12.96 kcal Atomic # 14 Polarization: 21.43 SS G_CDS: -5.02 Total: 16.41 kcal Atomic # 17 Polarization: -1.19 SS G_CDS: -3.00 Total: -4.19 kcal Total LS contribution 4.74 Total: 4.74 kcal Total: -30.56 -8.43 -38.98 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000042454249.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.566 kcal (2) G-P(sol) polarization free energy of solvation -30.557 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.991 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.426 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.983 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.417 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds