Wall clock time and date at job start Fri Apr 10 2020 20:53:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 H 1.09000 * 109.47427 * 2 1 4 4 C 1.50707 * 109.47009 * 119.99712 * 2 1 3 5 5 H 1.07998 * 120.00124 * 120.00111 * 4 2 1 6 6 C 1.37881 * 119.99829 * 300.00337 * 4 2 1 7 7 N 1.31512 * 120.00208 * 359.97438 * 6 4 2 8 8 Si 1.86801 * 119.99771 * 179.97438 * 6 4 2 9 9 H 1.48502 * 109.47254 * 0.02562 * 8 6 4 10 10 H 1.48501 * 109.46893 * 120.00238 * 8 6 4 11 11 H 1.48501 * 109.47020 * 239.99901 * 8 6 4 12 12 N 1.46494 * 109.47580 * 239.99551 * 2 1 3 13 13 C 1.34776 * 120.00011 * 85.00284 * 12 2 1 14 14 O 1.21279 * 119.99832 * 359.97438 * 13 12 2 15 15 C 1.50696 * 120.00388 * 180.02562 * 13 12 2 16 16 C 1.50697 * 109.47372 * 179.97438 * 15 13 12 17 17 C 1.38254 * 119.99850 * 100.00183 * 16 15 13 18 18 C 1.38225 * 120.03649 * 179.97438 * 17 16 15 19 19 C 1.38243 * 120.03832 * 0.02562 * 18 17 16 20 20 C 1.38303 * 120.00471 * 0.02562 * 19 18 17 21 21 Cl 1.73598 * 120.02295 * 180.02562 * 20 19 18 22 22 C 1.38306 * 120.00459 * 279.98083 * 16 15 13 23 23 Cl 1.73598 * 120.01512 * 359.97438 * 22 16 15 24 24 H 1.08997 * 109.47390 * 300.00522 * 1 2 3 25 25 H 1.09005 * 109.46710 * 60.00282 * 1 2 3 26 26 H 1.09000 * 109.47427 * 180.02562 * 1 2 3 27 27 H 0.96993 * 120.00473 * 180.02562 * 7 6 4 28 28 H 0.97002 * 120.00150 * 265.00090 * 12 2 1 29 29 H 1.09003 * 109.47290 * 60.00081 * 15 13 12 30 30 H 1.09003 * 109.47255 * 300.00218 * 15 13 12 31 31 H 1.07998 * 119.98044 * 0.25408 * 17 16 15 32 32 H 1.08002 * 119.97422 * 180.02562 * 18 17 16 33 33 H 1.08001 * 119.99663 * 180.02562 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 6 2.0323 -0.7104 1.2306 5 1 2.6532 -1.5885 1.1315 6 6 1.6991 -0.2393 2.4828 7 7 0.9434 0.8303 2.6034 8 14 2.3211 -1.1202 4.0081 9 1 3.1463 -2.2869 3.6040 10 1 3.1463 -0.1871 4.8167 11 1 1.1658 -1.5865 4.8162 12 7 2.0184 -0.6907 -1.1960 13 6 2.1472 -0.0184 -2.3570 14 8 1.8583 1.1582 -2.4117 15 6 2.6491 -0.7289 -3.5876 16 6 2.6994 0.2393 -4.7413 17 6 3.9010 0.8169 -5.1070 18 6 3.9482 1.7046 -6.1655 19 6 2.7937 2.0163 -6.8593 20 6 1.5906 1.4402 -6.4941 21 17 0.1407 1.8307 -7.3654 22 6 1.5436 0.5496 -5.4346 23 17 0.0347 -0.1763 -4.9765 24 1 -0.3634 0.5139 0.8899 25 1 -0.3633 0.5138 -0.8901 26 1 -0.3634 -1.0276 0.0005 27 1 0.7093 1.1619 3.4843 28 1 2.2491 -1.6318 -1.1524 29 1 1.9762 -1.5507 -3.8325 30 1 3.6482 -1.1215 -3.3984 31 1 4.8041 0.5709 -4.5683 32 1 4.8875 2.1550 -6.4506 33 1 2.8314 2.7096 -7.6864 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000193949310.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 20:53:17 Heat of formation + Delta-G solvation = -36.672442 kcal Electronic energy + Delta-G solvation = -19505.263893 eV Core-core repulsion = 16196.213160 eV Total energy + Delta-G solvation = -3309.050733 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 301.038 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -39.90776 -38.48879 -36.60827 -36.42971 -34.80404 -32.85122 -32.30317 -30.67854 -29.27237 -27.21672 -25.23883 -22.89252 -22.45968 -20.85889 -19.39622 -17.46421 -16.99435 -16.26566 -15.92219 -15.62561 -15.14541 -14.35342 -14.26965 -14.12474 -13.95837 -13.28720 -12.93189 -12.44438 -12.24517 -11.98373 -11.81362 -11.73021 -11.46732 -11.42353 -11.10768 -11.00439 -10.93533 -10.74136 -10.69276 -10.29233 -10.23210 -9.20478 -9.03143 -8.76320 -8.72988 -8.54556 -7.89372 -6.11980 -4.21367 0.92012 0.99006 1.82671 2.23606 3.23331 3.30679 3.32722 3.34559 3.40137 4.14322 4.36748 4.48008 4.67702 4.97651 5.02372 5.14105 5.20342 5.32013 5.51705 5.54188 5.75998 5.84575 6.05717 6.22511 6.49468 6.85023 7.00123 7.17693 7.47788 7.57343 7.70204 7.92854 8.16286 8.67189 8.78732 9.13745 9.46382 10.93970 Molecular weight = 301.04amu Principal moments of inertia in cm(-1) A = 0.028311 B = 0.003613 C = 0.003411 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 988.769456 B = 7748.339803 C = 8206.631540 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C 0.265 3.735 3 H 0.048 0.952 4 C -0.533 4.533 5 H 0.061 0.939 6 C 0.066 3.934 7 N -0.883 5.883 8 Si 0.901 3.099 9 H -0.273 1.273 10 H -0.283 1.283 11 H -0.283 1.283 12 N -0.709 5.709 13 C 0.506 3.494 14 O -0.544 6.544 15 C -0.114 4.114 16 C -0.035 4.035 17 C -0.094 4.094 18 C -0.104 4.104 19 C -0.106 4.106 20 C -0.031 4.031 21 Cl -0.056 7.056 22 C -0.013 4.013 23 Cl -0.043 7.043 24 H 0.089 0.911 25 H 0.015 0.985 26 H 0.025 0.975 27 H 0.264 0.736 28 H 0.388 0.612 29 H 0.103 0.897 30 H 0.104 0.896 31 H 0.137 0.863 32 H 0.137 0.863 33 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.427 -2.251 -18.980 19.619 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C 0.164 3.836 3 H 0.066 0.934 4 C -0.572 4.572 5 H 0.080 0.920 6 C -0.137 4.137 7 N -0.520 5.520 8 Si 0.728 3.272 9 H -0.197 1.197 10 H -0.209 1.209 11 H -0.209 1.209 12 N -0.357 5.357 13 C 0.290 3.710 14 O -0.422 6.422 15 C -0.154 4.154 16 C -0.036 4.036 17 C -0.113 4.113 18 C -0.123 4.123 19 C -0.125 4.125 20 C -0.058 4.058 21 Cl -0.027 7.027 22 C -0.041 4.041 23 Cl -0.014 7.014 24 H 0.108 0.892 25 H 0.034 0.966 26 H 0.044 0.956 27 H 0.074 0.926 28 H 0.220 0.780 29 H 0.122 0.878 30 H 0.122 0.878 31 H 0.155 0.845 32 H 0.155 0.845 33 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 3.843 -1.307 -18.869 19.300 hybrid contribution 0.088 -0.902 0.906 1.281 sum 3.931 -2.208 -17.962 18.519 Atomic orbital electron populations 1.22063 0.98481 0.99048 1.00898 1.18729 0.91017 0.93933 0.79932 0.93414 1.21263 1.32376 1.13190 0.90340 0.92035 1.24892 0.94823 0.94952 0.99059 1.69914 1.35912 1.22456 1.23754 0.86406 0.78604 0.79521 0.82630 1.19739 1.20893 1.20885 1.46490 1.65249 1.13494 1.10451 1.20050 0.79078 0.87596 0.84294 1.90689 1.50709 1.15875 1.84906 1.20844 1.04495 0.97965 0.92083 1.19224 0.91448 0.97783 0.95153 1.21118 0.97231 0.96181 0.96751 1.21128 0.98157 0.97586 0.95397 1.20973 0.90356 1.00148 1.01030 1.20703 0.89264 0.99897 0.95940 1.98376 1.36301 1.93061 1.74984 1.20599 0.88599 0.98494 0.96401 1.98393 1.29993 1.81244 1.91747 0.89249 0.96585 0.95557 0.92642 0.77959 0.87840 0.87763 0.84488 0.84509 0.84324 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.69 9.26 37.15 0.34 -3.34 16 2 C 0.27 6.74 2.56 -69.09 -0.18 6.56 16 3 H 0.05 1.40 7.58 -51.93 -0.39 1.01 16 4 C -0.53 -14.04 8.73 -34.44 -0.30 -14.34 16 5 H 0.06 1.54 7.74 -52.49 -0.41 1.14 16 6 C 0.07 1.77 5.30 -17.82 -0.09 1.67 16 7 N -0.88 -24.94 11.32 55.43 0.63 -24.31 16 8 Si 0.90 20.54 29.54 -169.99 -5.02 15.52 16 9 H -0.27 -6.06 7.11 56.52 0.40 -5.65 16 10 H -0.28 -6.47 7.11 56.52 0.40 -6.06 16 11 H -0.28 -6.42 7.11 56.52 0.40 -6.02 16 12 N -0.71 -14.46 5.07 -54.94 -0.28 -14.74 16 13 C 0.51 9.77 7.56 -10.99 -0.08 9.69 16 14 O -0.54 -12.79 15.61 5.56 0.09 -12.70 16 15 C -0.11 -1.57 5.30 -29.04 -0.15 -1.72 16 16 C -0.03 -0.48 4.43 -104.59 -0.46 -0.94 16 17 C -0.09 -1.09 9.67 -39.58 -0.38 -1.47 16 18 C -0.10 -1.04 10.04 -39.58 -0.40 -1.44 16 19 C -0.11 -1.14 9.83 -39.56 -0.39 -1.53 16 20 C -0.03 -0.40 6.32 -39.47 -0.25 -0.65 16 21 Cl -0.06 -0.70 27.96 -51.86 -1.45 -2.15 16 22 C -0.01 -0.19 6.20 -39.47 -0.24 -0.44 16 23 Cl -0.04 -0.66 26.33 -51.86 -1.37 -2.02 16 24 H 0.09 2.45 6.07 -51.93 -0.32 2.13 16 25 H 0.02 0.38 8.14 -51.93 -0.42 -0.04 16 26 H 0.03 0.61 8.14 -51.93 -0.42 0.19 16 27 H 0.26 7.05 8.31 -40.82 -0.34 6.71 16 28 H 0.39 6.74 8.54 -40.82 -0.35 6.40 16 29 H 0.10 1.28 7.35 -51.93 -0.38 0.89 16 30 H 0.10 1.11 8.00 -51.93 -0.42 0.70 16 31 H 0.14 1.27 8.04 -52.49 -0.42 0.85 16 32 H 0.14 0.93 8.06 -52.49 -0.42 0.51 16 33 H 0.14 1.14 8.06 -52.49 -0.42 0.71 16 LS Contribution 316.38 15.07 4.77 4.77 Total: -1.00 -31.40 316.38 -8.73 -40.13 By element: Atomic # 1 Polarization: 6.97 SS G_CDS: -3.51 Total: 3.46 kcal Atomic # 6 Polarization: -5.36 SS G_CDS: -2.59 Total: -7.95 kcal Atomic # 7 Polarization: -39.40 SS G_CDS: 0.35 Total: -39.05 kcal Atomic # 8 Polarization: -12.79 SS G_CDS: 0.09 Total: -12.70 kcal Atomic # 14 Polarization: 20.54 SS G_CDS: -5.02 Total: 15.52 kcal Atomic # 17 Polarization: -1.36 SS G_CDS: -2.82 Total: -4.17 kcal Total LS contribution 4.77 Total: 4.77 kcal Total: -31.40 -8.73 -40.13 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000193949310.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.462 kcal (2) G-P(sol) polarization free energy of solvation -31.402 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.940 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.733 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.134 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.672 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds