Wall clock time and date at job start Fri Apr 10 2020 21:35:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.53003 * 109.47128 * 2 1 4 4 H 1.09001 * 109.46696 * 304.99394 * 3 2 1 5 5 N 1.46494 * 109.47220 * 64.99873 * 3 2 1 6 6 C 1.34786 * 119.99819 * 259.51993 * 5 3 2 7 7 O 1.21551 * 119.99598 * 359.97438 * 6 5 3 8 8 C 1.47878 * 119.99889 * 179.97438 * 6 5 3 9 9 C 1.39921 * 120.02815 * 0.29582 * 8 6 5 10 10 C 1.38329 * 120.35824 * 180.25388 * 9 8 6 11 11 C 1.37753 * 120.41208 * 359.44693 * 10 9 8 12 12 C 1.40740 * 120.04071 * 0.27546 * 11 10 9 13 13 C 1.41438 * 120.17855 * 179.97438 * 12 11 10 14 14 H 1.07996 * 119.99988 * 29.61699 * 13 12 11 15 15 C 1.39942 * 119.99889 * 209.62494 * 13 12 11 16 16 N 1.30831 * 120.00004 * 12.59320 * 15 13 12 17 17 Si 1.86797 * 119.99906 * 192.59463 * 15 13 12 18 18 H 1.48505 * 109.47147 * 359.97438 * 17 15 13 19 19 H 1.48499 * 109.47250 * 120.00101 * 17 15 13 20 20 H 1.48497 * 109.47265 * 239.99971 * 17 15 13 21 21 C 1.38996 * 120.02399 * 179.97438 * 8 6 5 22 22 C 1.53003 * 109.46785 * 184.99947 * 3 2 1 23 23 H 1.09001 * 109.46970 * 63.22947 * 22 3 2 24 24 O 1.42900 * 109.47167 * 303.22706 * 22 3 2 25 25 C 1.52998 * 109.46727 * 183.23175 * 22 3 2 26 26 C 1.52996 * 109.47092 * 176.82587 * 25 22 3 27 27 C 1.53007 * 109.46908 * 296.82513 * 25 22 3 28 28 H 1.09000 * 109.46426 * 60.00243 * 1 2 3 29 29 H 1.08998 * 109.46627 * 180.02562 * 1 2 3 30 30 H 1.08997 * 109.47083 * 300.00511 * 1 2 3 31 31 H 1.08997 * 109.47083 * 239.99489 * 2 1 3 32 32 H 1.09006 * 109.46734 * 119.99509 * 2 1 3 33 33 H 0.96998 * 120.00450 * 79.51705 * 5 3 2 34 34 H 1.07999 * 119.82060 * 359.97438 * 9 8 6 35 35 H 1.08004 * 119.79327 * 179.71626 * 10 9 8 36 36 H 1.08006 * 119.97617 * 180.24956 * 11 10 9 37 37 H 0.97003 * 119.99594 * 179.97438 * 16 15 13 38 38 H 1.08000 * 120.20671 * 0.04669 * 21 8 6 39 39 H 0.96700 * 113.99919 * 300.00397 * 24 22 3 40 40 H 1.08997 * 109.47342 * 56.82432 * 25 22 3 41 41 H 1.09000 * 109.47338 * 184.37355 * 26 25 22 42 42 H 1.09001 * 109.47047 * 304.37956 * 26 25 22 43 43 H 1.09000 * 109.47281 * 64.37639 * 26 25 22 44 44 H 1.08997 * 109.47525 * 60.00260 * 27 25 22 45 45 H 1.09002 * 109.46625 * 180.02562 * 27 25 22 46 46 H 1.08997 * 109.47053 * 300.00097 * 27 25 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 1 1.6055 1.9815 -0.8419 5 7 1.6525 2.0975 1.2517 6 6 0.5884 2.9243 1.2783 7 8 -0.0493 3.1268 0.2635 8 6 0.1968 3.5851 2.5420 9 6 0.9342 3.3572 3.7090 10 6 0.5709 3.9676 4.8960 11 6 -0.5139 4.8155 4.9406 12 6 -1.2643 5.0614 3.7756 13 6 -2.3789 5.9310 3.8182 14 1 -2.4007 6.7467 4.5256 15 6 -3.4536 5.7342 2.9438 16 7 -3.5484 4.6204 2.2640 17 14 -4.7528 7.0619 2.7472 18 1 -4.4181 8.2153 3.6206 19 1 -4.7944 7.5081 1.3314 20 1 -6.0793 6.5176 3.1336 21 6 -0.9002 4.4382 2.5698 22 6 3.5649 1.4443 -0.1257 23 1 3.8510 1.0086 -1.0830 24 8 4.1313 0.6741 0.9364 25 6 4.0816 2.8821 -0.0448 26 6 5.6108 2.8778 -0.0909 27 6 3.5379 3.6867 -1.2272 28 1 -0.3632 0.5138 -0.8900 29 1 -0.3632 -1.0277 0.0005 30 1 -0.3633 0.5139 0.8899 31 1 1.8934 -0.5139 -0.8899 32 1 1.8933 -0.5138 0.8901 33 1 2.1616 1.9362 2.0615 34 1 1.7891 2.6976 3.6840 35 1 1.1439 3.7816 5.7924 36 1 -0.7889 5.2915 5.8703 37 1 -4.2936 4.4840 1.6582 38 1 -1.4697 4.6206 1.6705 39 1 3.9174 1.0050 1.8195 40 1 3.7475 3.3363 0.8881 41 1 5.9813 3.8939 0.0447 42 1 5.9966 2.2411 0.7052 43 1 5.9442 2.4954 -1.0557 44 1 2.4484 3.6898 -1.1943 45 1 3.9063 4.7109 -1.1697 46 1 3.8719 3.2325 -2.1600 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000412757197.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 21:35:30 Heat of formation + Delta-G solvation = -95.670338 kcal Electronic energy + Delta-G solvation = -25945.498584 eV Core-core repulsion = 22412.656427 eV Total energy + Delta-G solvation = -3532.842157 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 305.178 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -40.05618 -38.26697 -36.93886 -34.65356 -34.24652 -33.74161 -32.09632 -30.03558 -29.47515 -28.14138 -26.92227 -25.32562 -23.91764 -22.76119 -21.07620 -20.66839 -20.30042 -19.62856 -17.89045 -16.96096 -16.19810 -15.79628 -15.42177 -15.08717 -14.81497 -14.56307 -14.45567 -13.94224 -13.70795 -13.27955 -13.14607 -12.94825 -12.71086 -12.54234 -12.43969 -12.23484 -12.17054 -11.68542 -11.55888 -11.48964 -11.22676 -11.16685 -11.12316 -10.92568 -10.81528 -10.72735 -10.53042 -10.45563 -10.02724 -9.89033 -9.70965 -9.27585 -9.04445 -8.63236 -7.66462 -7.51361 -6.77930 -4.45237 2.16494 2.78103 3.07557 3.11110 3.12326 3.57909 3.83394 3.92359 4.20418 4.52968 4.63118 4.77338 4.89615 5.20281 5.23746 5.28965 5.46190 5.52806 5.55789 5.58312 5.62304 5.70570 5.80490 5.89900 5.94123 5.98556 6.04527 6.08481 6.13349 6.20693 6.26471 6.29023 6.38124 6.59677 6.67699 6.83475 6.96242 6.97238 7.18861 7.34800 7.46400 7.64869 7.71101 7.87451 8.05026 8.15818 8.47991 8.79317 8.80311 8.92159 10.17505 Molecular weight = 305.18amu Principal moments of inertia in cm(-1) A = 0.017401 B = 0.003914 C = 0.003752 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1608.699416 B = 7152.372480 C = 7461.607564 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.125 4.125 3 C 0.108 3.892 4 H 0.105 0.895 5 N -0.729 5.729 6 C 0.568 3.432 7 O -0.541 6.541 8 C -0.131 4.131 9 C -0.213 4.213 10 C -0.100 4.100 11 C -0.206 4.206 12 C 0.100 3.900 13 C -0.463 4.463 14 H 0.080 0.920 15 C 0.073 3.927 16 N -0.791 5.791 17 Si 0.911 3.089 18 H -0.261 1.261 19 H -0.271 1.271 20 H -0.274 1.274 21 C -0.085 4.085 22 C 0.104 3.896 23 H 0.105 0.895 24 O -0.556 6.556 25 C -0.127 4.127 26 C -0.142 4.142 27 C -0.149 4.149 28 H 0.055 0.945 29 H 0.047 0.953 30 H 0.058 0.942 31 H 0.065 0.935 32 H 0.066 0.934 33 H 0.393 0.607 34 H 0.089 0.911 35 H 0.093 0.907 36 H 0.096 0.904 37 H 0.283 0.717 38 H 0.132 0.868 39 H 0.370 0.630 40 H 0.078 0.922 41 H 0.052 0.948 42 H 0.060 0.940 43 H 0.051 0.949 44 H 0.065 0.935 45 H 0.056 0.944 46 H 0.052 0.948 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.826 -5.546 -4.130 13.700 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.164 4.164 3 C 0.002 3.998 4 H 0.122 0.878 5 N -0.383 5.383 6 C 0.359 3.641 7 O -0.419 6.419 8 C -0.134 4.134 9 C -0.233 4.233 10 C -0.119 4.119 11 C -0.226 4.226 12 C 0.097 3.903 13 C -0.493 4.493 14 H 0.099 0.901 15 C -0.145 4.145 16 N -0.416 5.416 17 Si 0.735 3.265 18 H -0.184 1.184 19 H -0.196 1.196 20 H -0.199 1.199 21 C -0.105 4.105 22 C 0.045 3.955 23 H 0.123 0.877 24 O -0.361 6.361 25 C -0.146 4.146 26 C -0.199 4.199 27 C -0.207 4.207 28 H 0.074 0.926 29 H 0.066 0.934 30 H 0.077 0.923 31 H 0.083 0.917 32 H 0.085 0.915 33 H 0.228 0.772 34 H 0.107 0.893 35 H 0.111 0.889 36 H 0.114 0.886 37 H 0.094 0.906 38 H 0.150 0.850 39 H 0.217 0.783 40 H 0.096 0.904 41 H 0.071 0.929 42 H 0.079 0.921 43 H 0.070 0.930 44 H 0.084 0.916 45 H 0.075 0.925 46 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges 11.433 -5.870 -5.554 14.001 hybrid contribution -0.676 0.720 0.791 1.265 sum 10.757 -5.150 -4.763 12.842 Atomic orbital electron populations 1.21712 0.95131 1.00701 1.02944 1.21797 0.96594 0.95809 1.02190 1.21742 0.94430 0.93954 0.89661 0.87756 1.45884 1.32521 1.48517 1.11398 1.18770 0.78745 0.77346 0.89214 1.90695 1.52696 1.63051 1.35437 1.19494 0.99703 1.02584 0.91664 1.20342 1.02281 1.07231 0.93438 1.20450 0.97286 0.98124 0.96019 1.21168 1.00135 1.03982 0.97353 1.17617 0.91680 0.90910 0.90074 1.19599 1.00554 1.12250 1.16898 0.90139 1.25925 0.99217 0.95637 0.93763 1.69773 1.29175 1.22568 1.20112 0.86218 0.79820 0.81303 0.79155 1.18418 1.19642 1.19936 1.21625 0.93693 0.96141 0.99007 1.22370 0.90825 0.90897 0.91438 0.87693 1.86568 1.76411 1.56002 1.17105 1.21774 0.96258 0.95939 1.00648 1.21757 0.94751 1.01442 1.01957 1.21837 1.02020 0.99771 0.97050 0.92568 0.93424 0.92332 0.91681 0.91488 0.77168 0.89341 0.88888 0.88577 0.90612 0.85014 0.78259 0.90360 0.92936 0.92067 0.93002 0.91617 0.92514 0.92845 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.19 9.28 37.16 0.34 -1.84 16 2 C -0.13 -1.57 5.35 -26.73 -0.14 -1.71 16 3 C 0.11 1.39 1.75 -67.93 -0.12 1.27 16 4 H 0.10 1.57 5.67 -51.93 -0.29 1.27 16 5 N -0.73 -10.75 3.64 -54.74 -0.20 -10.95 16 6 C 0.57 11.45 6.58 -12.31 -0.08 11.37 16 7 O -0.54 -12.55 15.41 5.32 0.08 -12.47 16 8 C -0.13 -2.95 5.87 -105.04 -0.62 -3.56 16 9 C -0.21 -4.24 9.55 -38.92 -0.37 -4.61 16 10 C -0.10 -2.07 10.01 -39.73 -0.40 -2.47 16 11 C -0.21 -4.79 9.78 -38.81 -0.38 -5.17 16 12 C 0.10 2.58 5.53 -106.87 -0.59 1.99 16 13 C -0.46 -12.06 9.05 -37.73 -0.34 -12.40 16 14 H 0.08 2.00 7.88 -52.49 -0.41 1.58 16 15 C 0.07 1.82 5.21 -17.34 -0.09 1.73 16 16 N -0.79 -20.83 11.00 55.55 0.61 -20.22 16 17 Si 0.91 18.73 29.58 -169.99 -5.03 13.71 16 18 H -0.26 -5.25 7.11 56.52 0.40 -4.85 16 19 H -0.27 -5.55 7.11 56.52 0.40 -5.15 16 20 H -0.27 -5.54 7.11 56.52 0.40 -5.14 16 21 C -0.08 -2.19 8.19 -38.44 -0.31 -2.51 16 22 C 0.10 1.12 2.44 -26.73 -0.07 1.05 16 23 H 0.11 1.06 8.14 -51.93 -0.42 0.64 16 24 O -0.56 -5.80 11.75 -35.23 -0.41 -6.22 16 25 C -0.13 -1.38 2.54 -90.62 -0.23 -1.61 16 26 C -0.14 -1.36 9.08 37.16 0.34 -1.03 16 27 C -0.15 -1.73 8.91 37.16 0.33 -1.40 16 28 H 0.06 0.88 8.14 -51.93 -0.42 0.46 16 29 H 0.05 0.62 8.14 -51.93 -0.42 0.20 16 30 H 0.06 1.03 6.89 -51.93 -0.36 0.68 16 31 H 0.06 0.72 8.14 -51.93 -0.42 0.30 16 32 H 0.07 0.82 7.77 -51.93 -0.40 0.41 16 33 H 0.39 4.98 5.45 -40.82 -0.22 4.76 16 34 H 0.09 1.41 6.38 -52.49 -0.33 1.08 16 35 H 0.09 1.62 8.06 -52.48 -0.42 1.20 16 36 H 0.10 2.09 8.06 -52.48 -0.42 1.66 16 37 H 0.28 6.86 8.30 -40.82 -0.34 6.52 16 38 H 0.13 3.73 5.94 -52.49 -0.31 3.41 16 39 H 0.37 3.12 7.69 45.56 0.35 3.47 16 40 H 0.08 0.95 7.41 -51.93 -0.38 0.57 16 41 H 0.05 0.49 8.14 -51.93 -0.42 0.07 16 42 H 0.06 0.59 7.46 -51.93 -0.39 0.20 16 43 H 0.05 0.47 8.14 -51.93 -0.42 0.05 16 44 H 0.06 0.92 6.58 -51.93 -0.34 0.57 16 45 H 0.06 0.64 8.14 -51.93 -0.42 0.22 16 46 H 0.05 0.53 8.14 -51.93 -0.42 0.11 16 LS Contribution 366.47 15.07 5.52 5.52 Total: -1.00 -28.61 366.47 -8.62 -37.23 By element: Atomic # 1 Polarization: 20.75 SS G_CDS: -6.46 Total: 14.29 kcal Atomic # 6 Polarization: -18.16 SS G_CDS: -2.73 Total: -20.89 kcal Atomic # 7 Polarization: -31.58 SS G_CDS: 0.41 Total: -31.17 kcal Atomic # 8 Polarization: -18.35 SS G_CDS: -0.33 Total: -18.68 kcal Atomic # 14 Polarization: 18.73 SS G_CDS: -5.03 Total: 13.71 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -28.61 -8.62 -37.23 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000412757197.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.442 kcal (2) G-P(sol) polarization free energy of solvation -28.612 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.054 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.616 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.229 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.670 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds