Wall clock time and date at job start Fri Apr 10 2020 22:01:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.50706 * 119.99778 * 2 1 4 4 C 1.30994 * 120.00359 * 179.97438 * 2 1 3 5 5 C 1.50706 * 119.99862 * 0.02562 * 4 2 1 6 6 C 1.53003 * 109.47140 * 125.00094 * 5 4 2 7 7 C 1.52994 * 109.47265 * 180.02562 * 6 5 4 8 8 H 1.09008 * 109.46970 * 304.99734 * 7 6 5 9 9 C 1.53001 * 109.47368 * 64.99313 * 7 6 5 10 10 C 1.52997 * 109.47404 * 184.99783 * 7 6 5 11 11 C 1.50701 * 109.47212 * 174.99684 * 10 7 6 12 12 O 1.21280 * 119.99781 * 0.02562 * 11 10 7 13 13 N 1.34780 * 119.99795 * 179.97438 * 11 10 7 14 14 C 1.46921 * 120.63059 * 359.72315 * 13 11 10 15 15 C 1.52760 * 109.00903 * 233.58159 * 14 13 11 16 16 C 1.53040 * 109.38219 * 305.58856 * 15 14 13 17 17 C 1.50698 * 109.45162 * 181.25116 * 16 15 14 18 18 H 1.07997 * 120.00517 * 239.94623 * 17 16 15 19 19 C 1.37880 * 119.99723 * 59.93708 * 17 16 15 20 20 N 1.31520 * 119.99773 * 0.02562 * 19 17 16 21 21 Si 1.86796 * 120.00036 * 179.97438 * 19 17 16 22 22 H 1.48504 * 109.46814 * 90.00460 * 21 19 17 23 23 H 1.48497 * 109.47362 * 210.00048 * 21 19 17 24 24 H 1.48492 * 109.47376 * 330.00719 * 21 19 17 25 25 C 1.53042 * 109.53627 * 61.23932 * 16 15 14 26 26 C 1.46926 * 120.62707 * 180.02562 * 13 11 10 27 27 H 1.08997 * 109.46725 * 239.99814 * 1 2 3 28 28 H 1.08997 * 109.47215 * 0.02562 * 1 2 3 29 29 H 1.09003 * 109.47004 * 120.00073 * 1 2 3 30 30 H 1.08999 * 109.47122 * 270.00057 * 3 2 1 31 31 H 1.09003 * 109.46982 * 30.00037 * 3 2 1 32 32 H 1.08994 * 109.46974 * 150.00188 * 3 2 1 33 33 H 1.07997 * 120.00472 * 179.97438 * 4 2 1 34 34 H 1.08992 * 109.46913 * 5.00082 * 5 4 2 35 35 H 1.09000 * 109.47109 * 244.99605 * 5 4 2 36 36 H 1.09001 * 109.47031 * 59.99391 * 6 5 4 37 37 H 1.09009 * 109.46835 * 299.99903 * 6 5 4 38 38 H 1.08996 * 109.47271 * 300.00893 * 9 7 6 39 39 H 1.09008 * 109.46731 * 60.00275 * 9 7 6 40 40 H 1.08998 * 109.47430 * 180.02562 * 9 7 6 41 41 H 1.09002 * 109.47153 * 54.99686 * 10 7 6 42 42 H 1.09001 * 109.46832 * 294.99876 * 10 7 6 43 43 H 1.08996 * 109.58649 * 353.41979 * 14 13 11 44 44 H 1.09004 * 109.58204 * 113.84425 * 14 13 11 45 45 H 1.09000 * 109.56394 * 185.56047 * 15 14 13 46 46 H 1.09001 * 109.38512 * 65.51568 * 15 14 13 47 47 H 1.09001 * 109.46468 * 301.22386 * 16 15 14 48 48 H 0.97002 * 119.99615 * 179.97438 * 20 19 17 49 49 H 1.09008 * 109.49904 * 178.67973 * 25 16 15 50 50 H 1.09000 * 109.52420 * 58.60476 * 25 16 15 51 51 H 1.09005 * 109.58410 * 246.15856 * 26 13 11 52 52 H 1.09001 * 109.58875 * 6.43498 * 26 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2605 1.3052 0.0000 4 6 2.1621 -1.1344 0.0005 5 6 1.4086 -2.4396 0.0005 6 6 1.8706 -3.2952 -1.1808 7 6 1.1053 -4.6200 -1.1812 8 1 1.2273 -5.1104 -0.2153 9 6 -0.3798 -4.3510 -1.4325 10 6 1.6536 -5.5255 -2.2857 11 6 0.9854 -6.8740 -2.2078 12 8 0.1522 -7.0894 -1.3532 13 7 1.3130 -7.8403 -3.0884 14 6 2.3152 -7.5921 -4.1337 15 6 1.7124 -7.9398 -5.4936 16 6 1.1794 -9.3740 -5.4612 17 6 0.6121 -9.7292 -6.8113 18 1 -0.4271 -10.0083 -6.9040 19 6 1.4196 -9.6976 -7.9284 20 7 2.6852 -9.3580 -7.8155 21 14 0.7166 -10.1385 -9.6019 22 1 0.1881 -8.9140 -10.2550 23 1 1.7849 -10.7287 -10.4478 24 1 -0.3821 -11.1231 -9.4335 25 6 0.0818 -9.4883 -4.4008 26 6 0.6698 -9.1598 -3.0254 27 1 -0.3633 -0.5139 0.8900 28 1 -0.3633 1.0276 -0.0005 29 1 -0.3633 -0.5139 -0.8900 30 1 2.4421 1.6199 -1.0277 31 1 1.6714 2.0648 0.5139 32 1 3.2129 1.1749 0.5138 33 1 3.2420 -1.1344 0.0001 34 1 0.3404 -2.2424 -0.0895 35 1 1.6028 -2.9712 0.9320 36 1 2.9389 -3.4923 -1.0908 37 1 1.6765 -2.7636 -2.1124 38 1 -0.7704 -3.7058 -0.6456 39 1 -0.5018 -3.8606 -2.3983 40 1 -0.9251 -5.2947 -1.4323 41 1 2.7294 -5.6451 -2.1569 42 1 1.4519 -5.0757 -3.2579 43 1 2.6034 -6.5410 -4.1212 44 1 3.1913 -8.2156 -3.9553 45 1 2.4777 -7.8535 -6.2649 46 1 0.8951 -7.2528 -5.7133 47 1 1.9923 -10.0581 -5.2174 48 1 3.2534 -9.3361 -8.6014 49 1 -0.3136 -10.5041 -4.3944 50 1 -0.7206 -8.7871 -4.6301 51 1 1.4088 -9.9140 -2.7546 52 1 -0.1255 -9.1435 -2.2801 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000581372090.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 22:01:35 Heat of formation + Delta-G solvation = -64.292450 kcal Electronic energy + Delta-G solvation = -25637.236725 eV Core-core repulsion = 22214.276831 eV Total energy + Delta-G solvation = -3422.959893 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 307.225 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -39.84992 -37.84054 -36.90518 -35.44767 -33.50848 -31.66751 -30.95498 -30.07441 -28.09700 -27.84359 -26.53197 -25.95827 -23.43028 -22.64592 -22.12726 -20.29601 -19.49906 -18.23102 -18.01326 -16.87942 -16.13295 -15.85322 -15.29184 -15.15242 -14.71928 -14.54220 -14.32278 -14.25593 -13.59448 -13.50027 -13.09259 -12.90680 -12.76264 -12.69241 -12.64879 -12.33389 -12.23186 -12.05593 -11.94740 -11.74011 -11.65682 -11.39610 -11.27954 -11.06702 -10.95970 -10.69470 -10.62589 -10.56934 -10.45575 -10.37251 -10.10776 -9.65181 -9.26600 -9.17253 -8.92725 -8.85370 -8.39698 -7.96918 -6.05032 -4.11009 1.97560 3.04491 3.26836 3.34018 3.37493 3.52636 4.39366 4.51180 4.69991 4.81289 4.84029 4.90130 5.10398 5.21721 5.24549 5.26120 5.26917 5.40262 5.44608 5.51178 5.57415 5.60464 5.66096 5.66782 5.73161 5.75703 5.80247 5.82392 5.88022 5.96447 6.03671 6.07080 6.09777 6.15428 6.20285 6.31875 6.43510 6.45617 6.48062 6.58746 6.66655 6.73871 6.90291 7.03670 7.15125 7.26885 7.65024 7.90307 7.97356 8.02729 8.38615 8.62910 8.92444 9.54119 11.00486 Molecular weight = 307.23amu Principal moments of inertia in cm(-1) A = 0.020487 B = 0.002439 C = 0.002304 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1366.392649 B =11476.160353 C =12148.714442 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.142 4.142 3 C -0.116 4.116 4 C -0.160 4.160 5 C -0.096 4.096 6 C -0.109 4.109 7 C -0.073 4.073 8 H 0.076 0.924 9 C -0.153 4.153 10 C -0.136 4.136 11 C 0.511 3.489 12 O -0.558 6.558 13 N -0.602 5.602 14 C 0.103 3.897 15 C -0.125 4.125 16 C 0.049 3.951 17 C -0.511 4.511 18 H 0.055 0.945 19 C 0.061 3.939 20 N -0.892 5.892 21 Si 0.891 3.109 22 H -0.281 1.281 23 H -0.287 1.287 24 H -0.275 1.275 25 C -0.123 4.123 26 C 0.111 3.889 27 H 0.065 0.935 28 H 0.057 0.943 29 H 0.067 0.933 30 H 0.065 0.935 31 H 0.060 0.940 32 H 0.060 0.940 33 H 0.106 0.894 34 H 0.074 0.926 35 H 0.069 0.931 36 H 0.061 0.939 37 H 0.062 0.938 38 H 0.050 0.950 39 H 0.046 0.954 40 H 0.075 0.925 41 H 0.089 0.911 42 H 0.092 0.908 43 H 0.067 0.933 44 H 0.061 0.939 45 H 0.104 0.896 46 H 0.038 0.962 47 H 0.027 0.973 48 H 0.260 0.740 49 H 0.059 0.941 50 H 0.051 0.949 51 H 0.058 0.942 52 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.654 15.931 13.914 21.162 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.142 4.142 3 C -0.173 4.173 4 C -0.178 4.178 5 C -0.133 4.133 6 C -0.147 4.147 7 C -0.092 4.092 8 H 0.094 0.906 9 C -0.210 4.210 10 C -0.176 4.176 11 C 0.299 3.701 12 O -0.438 6.438 13 N -0.334 5.334 14 C -0.019 4.019 15 C -0.163 4.163 16 C 0.030 3.970 17 C -0.549 4.549 18 H 0.073 0.927 19 C -0.140 4.140 20 N -0.531 5.531 21 Si 0.719 3.281 22 H -0.207 1.207 23 H -0.212 1.212 24 H -0.200 1.200 25 C -0.161 4.161 26 C -0.011 4.011 27 H 0.084 0.916 28 H 0.076 0.924 29 H 0.086 0.914 30 H 0.083 0.917 31 H 0.079 0.921 32 H 0.079 0.921 33 H 0.124 0.876 34 H 0.093 0.907 35 H 0.087 0.913 36 H 0.080 0.920 37 H 0.081 0.919 38 H 0.069 0.931 39 H 0.065 0.935 40 H 0.094 0.906 41 H 0.107 0.893 42 H 0.110 0.890 43 H 0.086 0.914 44 H 0.080 0.920 45 H 0.123 0.877 46 H 0.057 0.943 47 H 0.045 0.955 48 H 0.070 0.930 49 H 0.078 0.922 50 H 0.070 0.930 51 H 0.076 0.924 52 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 0.387 15.822 14.233 21.285 hybrid contribution -0.103 -0.234 -1.199 1.226 sum 0.283 15.588 13.034 20.322 Atomic orbital electron populations 1.20837 0.92473 1.01979 1.02124 1.21610 0.95827 0.95018 1.01738 1.20832 0.99529 0.95012 1.01880 1.22696 0.99351 0.93921 1.01839 1.20811 1.00157 0.93617 0.98736 1.21589 0.99686 0.95066 0.98327 1.20885 0.95664 0.94121 0.98547 0.90605 1.21985 0.95790 1.02755 1.00478 1.21760 1.01088 0.93394 1.01345 1.20597 0.82495 0.86055 0.80908 1.90591 1.34456 1.81874 1.36844 1.48285 1.41117 1.13132 1.30884 1.21946 0.90564 1.00091 0.89276 1.21946 1.01389 0.99199 0.93812 1.18631 0.92985 0.92679 0.92697 1.21211 0.96394 1.45279 0.92058 0.92715 1.24964 0.94848 0.95187 0.99014 1.69837 1.05089 1.48631 1.29565 0.86612 0.78746 0.78654 0.84105 1.20740 1.21245 1.19966 1.21993 0.99917 1.00325 0.93881 1.21660 0.97144 0.82999 0.99295 0.91648 0.92411 0.91415 0.91661 0.92114 0.92118 0.87599 0.90711 0.91256 0.91997 0.91877 0.93126 0.93481 0.90586 0.89305 0.89015 0.91414 0.92049 0.87748 0.94315 0.95488 0.92984 0.92230 0.93032 0.92406 0.90413 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.89 8.53 36.01 0.31 -0.59 16 2 C -0.14 -1.19 6.05 -101.06 -0.61 -1.80 16 3 C -0.12 -0.80 9.97 36.01 0.36 -0.44 16 4 C -0.16 -1.40 9.11 -36.02 -0.33 -1.73 16 5 C -0.10 -0.88 5.21 -27.88 -0.15 -1.02 16 6 C -0.11 -1.06 4.66 -26.73 -0.12 -1.18 16 7 C -0.07 -0.87 2.04 -90.62 -0.18 -1.05 16 8 H 0.08 0.98 7.96 -51.92 -0.41 0.57 16 9 C -0.15 -1.91 8.69 37.16 0.32 -1.59 16 10 C -0.14 -1.77 3.52 -27.88 -0.10 -1.87 16 11 C 0.51 8.66 7.42 -10.98 -0.08 8.57 16 12 O -0.56 -10.76 13.38 5.56 0.07 -10.69 16 13 N -0.60 -10.73 2.98 -173.06 -0.52 -11.24 16 14 C 0.10 1.81 6.31 -3.94 -0.02 1.79 16 15 C -0.13 -2.72 5.14 -26.83 -0.14 -2.86 16 16 C 0.05 1.15 2.07 -91.73 -0.19 0.96 16 17 C -0.51 -13.57 8.56 -34.44 -0.29 -13.87 16 18 H 0.05 1.46 7.74 -52.49 -0.41 1.05 16 19 C 0.06 1.62 5.30 -17.82 -0.09 1.53 16 20 N -0.89 -24.29 11.31 55.43 0.63 -23.66 16 21 Si 0.89 20.79 29.54 -169.99 -5.02 15.77 16 22 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 23 H -0.29 -6.66 7.11 56.52 0.40 -6.26 16 24 H -0.27 -6.38 7.11 56.52 0.40 -5.98 16 25 C -0.12 -2.53 5.30 -26.63 -0.14 -2.67 16 26 C 0.11 2.05 6.43 -3.73 -0.02 2.03 16 27 H 0.06 0.48 7.85 -51.93 -0.41 0.07 16 28 H 0.06 0.38 7.94 -51.93 -0.41 -0.03 16 29 H 0.07 0.53 7.66 -51.93 -0.40 0.14 16 30 H 0.06 0.43 8.14 -51.93 -0.42 0.01 16 31 H 0.06 0.37 8.05 -51.93 -0.42 -0.05 16 32 H 0.06 0.39 8.06 -51.93 -0.42 -0.03 16 33 H 0.11 0.87 8.04 -52.49 -0.42 0.45 16 34 H 0.07 0.68 4.22 -51.93 -0.22 0.46 16 35 H 0.07 0.63 8.14 -51.93 -0.42 0.21 16 36 H 0.06 0.57 8.14 -51.93 -0.42 0.14 16 37 H 0.06 0.62 8.14 -51.92 -0.42 0.20 16 38 H 0.05 0.55 6.56 -51.93 -0.34 0.21 16 39 H 0.05 0.56 8.14 -51.92 -0.42 0.14 16 40 H 0.08 1.17 5.95 -51.93 -0.31 0.86 16 41 H 0.09 1.02 7.95 -51.93 -0.41 0.60 16 42 H 0.09 1.15 7.68 -51.93 -0.40 0.75 16 43 H 0.07 1.00 5.93 -51.93 -0.31 0.70 16 44 H 0.06 1.07 8.14 -51.93 -0.42 0.65 16 45 H 0.10 2.53 6.03 -51.93 -0.31 2.21 16 46 H 0.04 0.86 8.14 -51.93 -0.42 0.44 16 47 H 0.03 0.69 8.14 -51.93 -0.42 0.27 16 48 H 0.26 6.80 8.31 -40.82 -0.34 6.46 16 49 H 0.06 1.18 8.14 -51.92 -0.42 0.76 16 50 H 0.05 1.10 8.14 -51.93 -0.42 0.67 16 51 H 0.06 1.02 8.14 -51.93 -0.42 0.60 16 52 H 0.08 1.43 7.00 -51.93 -0.36 1.07 16 LS Contribution 395.32 15.07 5.96 5.96 Total: -1.00 -28.35 395.32 -10.12 -38.46 By element: Atomic # 1 Polarization: 10.94 SS G_CDS: -9.75 Total: 1.20 kcal Atomic # 6 Polarization: -14.30 SS G_CDS: -1.49 Total: -15.79 kcal Atomic # 7 Polarization: -35.02 SS G_CDS: 0.11 Total: -34.91 kcal Atomic # 8 Polarization: -10.76 SS G_CDS: 0.07 Total: -10.69 kcal Atomic # 14 Polarization: 20.79 SS G_CDS: -5.02 Total: 15.77 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -28.35 -10.12 -38.46 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000581372090.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.829 kcal (2) G-P(sol) polarization free energy of solvation -28.347 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -54.177 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.116 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.463 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.292 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds