Wall clock time and date at job start Fri Apr 10 2020 22:11:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52994 * 109.47234 * 2 1 4 4 C 1.52993 * 109.47330 * 180.02562 * 3 2 1 5 5 H 1.09009 * 109.47126 * 305.00093 * 4 3 2 6 6 N 1.46497 * 109.47381 * 64.99803 * 4 3 2 7 7 C 1.34777 * 120.00144 * 275.00221 * 6 4 3 8 8 O 1.21589 * 119.99874 * 359.97438 * 7 6 4 9 9 N 1.34777 * 120.00425 * 179.97438 * 7 6 4 10 10 C 1.46497 * 120.00277 * 179.72472 * 9 7 6 11 11 C 1.52995 * 109.47257 * 178.58216 * 10 9 7 12 12 C 1.50697 * 115.55267 * 65.14225 * 11 10 9 13 13 H 1.08003 * 120.00194 * 265.43943 * 12 11 10 14 14 C 1.37882 * 120.00185 * 85.43371 * 12 11 10 15 15 N 1.31511 * 119.99500 * 353.60158 * 14 12 11 16 16 Si 1.86798 * 119.99976 * 173.59927 * 14 12 11 17 17 H 1.48501 * 109.47374 * 359.97438 * 16 14 12 18 18 H 1.48497 * 109.46910 * 120.00556 * 16 14 12 19 19 H 1.48507 * 109.46773 * 240.00130 * 16 14 12 20 20 C 1.53005 * 117.49969 * 279.47622 * 11 10 9 21 21 C 1.52998 * 117.50007 * 210.81566 * 11 10 9 22 22 C 1.53003 * 109.47584 * 184.99859 * 4 3 2 23 23 C 1.54261 * 110.02992 * 297.16753 * 22 4 3 24 24 C 1.54894 * 104.19584 * 217.10219 * 23 22 4 25 25 C 1.54885 * 102.74533 * 37.93952 * 24 23 22 26 26 C 1.53870 * 110.03510 * 179.97438 * 22 4 3 27 27 H 1.08994 * 109.47241 * 299.99957 * 1 2 3 28 28 H 1.08995 * 109.47371 * 60.00251 * 1 2 3 29 29 H 1.09003 * 109.47483 * 180.02562 * 1 2 3 30 30 H 1.09003 * 109.47119 * 239.99766 * 2 1 3 31 31 H 1.09001 * 109.46966 * 120.00326 * 2 1 3 32 32 H 1.09003 * 109.47259 * 59.99851 * 3 2 1 33 33 H 1.09009 * 109.46803 * 300.00004 * 3 2 1 34 34 H 0.97004 * 120.00204 * 95.00034 * 6 4 3 35 35 H 0.97005 * 119.99344 * 0.02562 * 9 7 6 36 36 H 1.08998 * 109.47236 * 298.58499 * 10 9 7 37 37 H 1.08996 * 109.46926 * 58.58069 * 10 9 7 38 38 H 0.97000 * 119.99451 * 185.05904 * 15 14 12 39 39 H 1.09003 * 117.49845 * 359.97438 * 20 11 10 40 40 H 1.08995 * 117.50066 * 145.01976 * 20 11 10 41 41 H 1.09004 * 117.49968 * 214.98071 * 21 11 10 42 42 H 1.08997 * 117.50236 * 359.97174 * 21 11 10 43 43 H 1.09008 * 110.01338 * 58.60265 * 22 4 3 44 44 H 1.09001 * 110.48924 * 335.78048 * 23 22 4 45 45 H 1.09002 * 110.48837 * 98.42381 * 23 22 4 46 46 H 1.08999 * 110.75304 * 279.62924 * 24 23 22 47 47 H 1.08995 * 110.75466 * 156.25996 * 24 23 22 48 48 H 1.09008 * 110.48521 * 203.37743 * 25 24 23 49 49 H 1.09005 * 110.59895 * 80.79847 * 25 24 23 50 50 H 1.09001 * 110.03601 * 238.56677 * 26 22 4 51 51 H 1.08998 * 110.03437 * 359.95643 * 26 22 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 3.5699 1.4425 -0.0006 5 1 3.9337 0.8528 0.8410 6 7 4.0578 0.8589 -1.2527 7 6 4.1865 -0.4777 -1.3681 8 8 3.8981 -1.1992 -0.4328 9 7 4.6348 -1.0147 -2.5201 10 6 4.7804 -2.4672 -2.6434 11 6 5.2687 -2.8131 -4.0515 12 6 6.6495 -2.3201 -4.4000 13 1 6.7729 -1.3786 -4.9145 14 6 7.7554 -3.0711 -4.0620 15 7 7.6160 -4.1525 -3.3268 16 14 9.4514 -2.5524 -4.6485 17 1 9.3381 -1.3104 -5.4546 18 1 10.3262 -2.3034 -3.4747 19 1 10.0380 -3.6317 -5.4830 20 6 4.2273 -2.8474 -5.1719 21 6 4.8267 -4.1529 -4.6433 22 6 4.0801 2.8794 0.1250 23 6 3.6318 3.7080 -1.0965 24 6 4.8330 4.6432 -1.3827 25 6 6.0518 3.7316 -1.0954 26 6 5.6187 2.8944 0.1263 27 1 -0.3633 0.5138 0.8899 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3634 -1.0277 0.0005 30 1 1.8933 -0.5139 -0.8900 31 1 1.8933 -0.5139 0.8900 32 1 1.6767 1.9563 0.8900 33 1 1.6766 1.9563 -0.8901 34 1 4.2882 1.4345 -1.9987 35 1 4.8653 -0.4390 -3.2661 36 1 5.5040 -2.8234 -1.9102 37 1 3.8173 -2.9453 -2.4652 38 1 8.3996 -4.6397 -3.0275 39 1 3.1941 -2.6239 -4.9057 40 1 4.5410 -2.5138 -6.1610 41 1 5.5345 -4.6778 -5.2850 42 1 4.1884 -4.7883 -4.0293 43 1 3.7018 3.3307 1.0424 44 1 3.4431 3.0573 -1.9504 45 1 2.7429 4.2914 -0.8565 46 1 4.8243 5.5001 -0.7091 47 1 4.8302 4.9682 -2.4230 48 1 6.9290 4.3322 -0.8545 49 1 6.2563 3.0846 -1.9485 50 1 5.9870 3.3539 1.0436 51 1 6.0021 1.8779 0.0382 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000458732562.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 22:11:41 Heat of formation + Delta-G solvation = -38.851655 kcal Electronic energy + Delta-G solvation = -27014.538635 eV Core-core repulsion = 23527.256026 eV Total energy + Delta-G solvation = -3487.282609 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 308.221 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -40.12368 -38.31184 -36.71429 -35.23542 -33.34791 -32.79370 -31.94911 -30.15905 -28.84003 -27.09487 -26.10030 -25.04605 -22.95147 -21.30979 -21.21538 -20.61717 -20.00237 -19.43138 -19.15837 -17.72743 -16.37333 -15.93970 -15.79827 -15.14502 -14.92315 -14.63848 -14.35369 -14.00120 -13.79855 -13.46525 -13.40052 -13.19767 -13.10969 -12.58126 -12.52084 -11.89365 -11.82607 -11.73729 -11.55398 -11.18988 -11.15406 -11.02070 -11.00949 -10.90170 -10.80212 -10.74748 -10.59976 -10.51354 -10.31185 -10.24581 -10.21695 -9.62921 -9.42092 -8.93237 -8.64018 -8.48299 -8.22332 -7.89928 -6.06372 -4.14587 3.25096 3.32734 3.34330 3.36083 3.90054 4.36031 4.42679 4.51085 4.58077 4.88421 5.00158 5.20427 5.21901 5.22689 5.34234 5.35983 5.39522 5.42813 5.49697 5.55248 5.58709 5.63838 5.75577 5.80339 5.86776 5.90570 5.99315 6.04825 6.06527 6.08119 6.19125 6.24588 6.26705 6.34259 6.37042 6.49545 6.51559 6.63467 6.71501 6.74785 6.90565 6.98042 7.11216 7.39747 7.46686 7.51211 7.68661 7.82976 8.36312 8.75708 8.86428 9.31823 9.51973 11.01548 Molecular weight = 308.22amu Principal moments of inertia in cm(-1) A = 0.012105 B = 0.004384 C = 0.003531 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2312.572685 B = 6385.690641 C = 7928.189723 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.118 4.118 3 C -0.127 4.127 4 C 0.171 3.829 5 H 0.086 0.914 6 N -0.745 5.745 7 C 0.698 3.302 8 O -0.599 6.599 9 N -0.723 5.723 10 C 0.184 3.816 11 C 0.028 3.972 12 C -0.498 4.498 13 H 0.059 0.941 14 C 0.074 3.926 15 N -0.874 5.874 16 Si 0.889 3.111 17 H -0.273 1.273 18 H -0.285 1.285 19 H -0.284 1.284 20 C -0.210 4.210 21 C -0.148 4.148 22 C -0.099 4.099 23 C -0.121 4.121 24 C -0.125 4.125 25 C -0.125 4.125 26 C -0.122 4.122 27 H 0.046 0.954 28 H 0.046 0.954 29 H 0.050 0.950 30 H 0.071 0.929 31 H 0.065 0.935 32 H 0.062 0.938 33 H 0.060 0.940 34 H 0.391 0.609 35 H 0.394 0.606 36 H 0.068 0.932 37 H 0.033 0.967 38 H 0.261 0.739 39 H 0.065 0.935 40 H 0.077 0.923 41 H 0.083 0.917 42 H 0.065 0.935 43 H 0.082 0.918 44 H 0.069 0.931 45 H 0.065 0.935 46 H 0.064 0.936 47 H 0.064 0.936 48 H 0.061 0.939 49 H 0.067 0.933 50 H 0.060 0.940 51 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.632 15.702 4.988 18.600 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.155 4.155 3 C -0.166 4.166 4 C 0.065 3.935 5 H 0.104 0.896 6 N -0.403 5.403 7 C 0.398 3.602 8 O -0.478 6.478 9 N -0.375 5.375 10 C 0.061 3.939 11 C 0.027 3.973 12 C -0.535 4.535 13 H 0.077 0.923 14 C -0.130 4.130 15 N -0.510 5.510 16 Si 0.716 3.284 17 H -0.198 1.198 18 H -0.211 1.211 19 H -0.210 1.210 20 C -0.248 4.248 21 C -0.186 4.186 22 C -0.118 4.118 23 C -0.159 4.159 24 C -0.163 4.163 25 C -0.163 4.163 26 C -0.160 4.160 27 H 0.065 0.935 28 H 0.066 0.934 29 H 0.069 0.931 30 H 0.089 0.911 31 H 0.084 0.916 32 H 0.081 0.919 33 H 0.078 0.922 34 H 0.225 0.775 35 H 0.227 0.773 36 H 0.087 0.913 37 H 0.051 0.949 38 H 0.071 0.929 39 H 0.083 0.917 40 H 0.095 0.905 41 H 0.101 0.899 42 H 0.083 0.917 43 H 0.100 0.900 44 H 0.087 0.913 45 H 0.084 0.916 46 H 0.083 0.917 47 H 0.083 0.917 48 H 0.080 0.920 49 H 0.086 0.914 50 H 0.079 0.921 51 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -8.784 14.786 5.886 18.178 hybrid contribution 1.238 0.667 -0.952 1.698 sum -7.546 15.454 4.934 17.891 Atomic orbital electron populations 1.21806 0.97146 1.01141 1.00729 1.21565 0.93995 0.96111 1.03847 1.22054 0.95367 0.97720 1.01455 1.20770 0.92907 0.92486 0.87295 0.89632 1.45235 1.72697 1.05587 1.16751 1.16020 0.78633 0.81832 0.83742 1.90873 1.57784 1.60033 1.39122 1.45158 1.69052 1.09452 1.13835 1.20793 0.97838 0.76733 0.98572 1.19059 0.92984 0.97218 0.88033 1.20355 0.88576 1.05743 1.38859 0.92270 1.24977 0.98863 0.94450 0.94715 1.69987 1.29600 1.17177 1.34228 0.86601 0.84526 0.78561 0.78675 1.19767 1.21075 1.20977 1.23010 0.97053 1.04722 0.99993 1.22483 1.01920 0.90552 1.03648 1.22095 0.95900 0.94682 0.99100 1.22455 0.97890 0.97641 0.97896 1.22507 0.94898 0.97822 1.01074 1.22376 0.97600 0.97925 0.98397 1.22209 0.94587 1.01101 0.98100 0.93476 0.93448 0.93128 0.91077 0.91636 0.91940 0.92151 0.77464 0.77324 0.91347 0.94874 0.92933 0.91691 0.90475 0.89886 0.91692 0.90006 0.91272 0.91642 0.91749 0.91705 0.91972 0.91403 0.92106 0.90923 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.78 9.91 37.16 0.37 -1.42 16 2 C -0.12 -1.65 4.54 -26.73 -0.12 -1.77 16 3 C -0.13 -1.45 4.60 -26.74 -0.12 -1.58 16 4 C 0.17 2.08 1.80 -67.93 -0.12 1.96 16 5 H 0.09 1.25 7.58 -51.92 -0.39 0.86 16 6 N -0.75 -10.27 4.20 -58.68 -0.25 -10.51 16 7 C 0.70 12.86 7.13 -86.92 -0.62 12.24 16 8 O -0.60 -13.02 13.48 5.29 0.07 -12.95 16 9 N -0.72 -13.97 5.48 -65.23 -0.36 -14.33 16 10 C 0.18 4.21 5.50 -4.05 -0.02 4.18 16 11 C 0.03 0.65 1.38 -155.66 -0.21 0.44 16 12 C -0.50 -12.74 8.63 -34.44 -0.30 -13.04 16 13 H 0.06 1.49 7.82 -52.48 -0.41 1.08 16 14 C 0.07 1.96 5.39 -17.82 -0.10 1.87 16 15 N -0.87 -24.32 12.91 55.43 0.72 -23.60 16 16 Si 0.89 20.56 29.55 -169.99 -5.02 15.54 16 17 H -0.27 -6.19 7.11 56.52 0.40 -5.78 16 18 H -0.28 -6.64 7.11 56.52 0.40 -6.24 16 19 H -0.28 -6.60 7.11 56.52 0.40 -6.20 16 20 C -0.21 -4.37 9.96 -26.69 -0.27 -4.64 16 21 C -0.15 -3.39 9.41 -26.69 -0.25 -3.64 16 22 C -0.10 -0.94 2.80 -89.51 -0.25 -1.19 16 23 C -0.12 -1.03 5.14 -25.07 -0.13 -1.15 16 24 C -0.13 -1.03 6.91 -24.74 -0.17 -1.20 16 25 C -0.13 -1.19 6.83 -25.05 -0.17 -1.36 16 26 C -0.12 -1.26 6.20 -25.59 -0.16 -1.42 16 27 H 0.05 0.49 8.14 -51.93 -0.42 0.07 16 28 H 0.05 0.52 8.14 -51.93 -0.42 0.10 16 29 H 0.05 0.61 8.14 -51.93 -0.42 0.18 16 30 H 0.07 1.21 5.64 -51.93 -0.29 0.92 16 31 H 0.06 1.03 7.85 -51.93 -0.41 0.63 16 32 H 0.06 0.62 8.14 -51.93 -0.42 0.20 16 33 H 0.06 0.65 7.44 -51.92 -0.39 0.27 16 34 H 0.39 4.69 6.85 -40.82 -0.28 4.41 16 35 H 0.39 7.01 8.38 -40.82 -0.34 6.67 16 36 H 0.07 1.81 8.14 -51.93 -0.42 1.39 16 37 H 0.03 0.75 8.09 -51.93 -0.42 0.33 16 38 H 0.26 6.98 8.32 -40.82 -0.34 6.65 16 39 H 0.06 1.25 8.14 -51.93 -0.42 0.82 16 40 H 0.08 1.57 8.14 -51.93 -0.42 1.15 16 41 H 0.08 2.02 8.14 -51.93 -0.42 1.60 16 42 H 0.06 1.42 8.14 -51.93 -0.42 1.00 16 43 H 0.08 0.70 8.14 -51.92 -0.42 0.28 16 44 H 0.07 0.62 6.10 -51.93 -0.32 0.30 16 45 H 0.06 0.50 8.14 -51.93 -0.42 0.08 16 46 H 0.06 0.49 8.14 -51.93 -0.42 0.07 16 47 H 0.06 0.50 8.14 -51.93 -0.42 0.08 16 48 H 0.06 0.56 8.14 -51.92 -0.42 0.13 16 49 H 0.07 0.70 8.14 -51.93 -0.42 0.28 16 50 H 0.06 0.58 8.14 -51.93 -0.42 0.15 16 51 H 0.07 0.92 7.38 -51.93 -0.38 0.54 16 LS Contribution 394.78 15.07 5.95 5.95 Total: -1.00 -28.54 394.78 -11.07 -39.61 By element: Atomic # 1 Polarization: 21.54 SS G_CDS: -9.53 Total: 12.00 kcal Atomic # 6 Polarization: -9.06 SS G_CDS: -2.65 Total: -11.71 kcal Atomic # 7 Polarization: -48.56 SS G_CDS: 0.11 Total: -48.44 kcal Atomic # 8 Polarization: -13.02 SS G_CDS: 0.07 Total: -12.95 kcal Atomic # 14 Polarization: 20.56 SS G_CDS: -5.02 Total: 15.54 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -28.54 -11.07 -39.61 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000458732562.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.761 kcal (2) G-P(sol) polarization free energy of solvation -28.545 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.784 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.067 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.612 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.852 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds