Wall clock time and date at job start Fri Apr 10 2020 22:11:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53000 * 109.46886 * 2 1 4 4 C 1.53002 * 109.46637 * 119.99695 * 2 1 3 5 5 C 1.50706 * 109.46931 * 299.99757 * 4 2 1 6 6 H 1.07999 * 120.00193 * 0.02562 * 5 4 2 7 7 C 1.37879 * 119.99398 * 180.02562 * 5 4 2 8 8 N 1.31514 * 119.99350 * 180.02562 * 7 5 4 9 9 Si 1.86798 * 120.00608 * 0.02562 * 7 5 4 10 10 H 1.48493 * 109.47326 * 270.00340 * 9 7 5 11 11 H 1.48506 * 109.46545 * 30.00090 * 9 7 5 12 12 H 1.48498 * 109.47210 * 149.99801 * 9 7 5 13 13 C 1.52996 * 109.47302 * 239.99782 * 2 1 3 14 14 N 1.46500 * 109.47368 * 60.00102 * 13 2 1 15 15 C 1.34777 * 119.99746 * 179.97438 * 14 13 2 16 16 O 1.21581 * 120.00299 * 0.02562 * 15 14 13 17 17 N 1.34784 * 119.99541 * 179.97438 * 15 14 13 18 18 C 1.47021 * 125.64785 * 0.03033 * 17 15 14 19 19 C 1.54322 * 107.26952 * 181.02252 * 18 17 15 20 20 C 1.55160 * 102.94207 * 22.18944 * 19 18 17 21 21 H 1.09004 * 111.00520 * 82.61355 * 20 19 18 22 22 C 1.53001 * 111.00213 * 206.42498 * 20 19 18 23 23 C 1.53786 * 113.61556 * 279.13568 * 22 20 19 24 24 C 1.53949 * 87.01752 * 220.04961 * 23 22 20 25 25 C 1.53779 * 113.61097 * 181.52855 * 22 20 19 26 26 C 1.47417 * 125.64612 * 179.71960 * 17 15 14 27 27 H 1.09002 * 109.47508 * 300.00429 * 1 2 3 28 28 H 1.09001 * 109.47109 * 60.00620 * 1 2 3 29 29 H 1.09000 * 109.47437 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.46968 * 179.97438 * 3 2 1 31 31 H 1.09001 * 109.47194 * 299.99323 * 3 2 1 32 32 H 1.09002 * 109.47398 * 59.99503 * 3 2 1 33 33 H 1.09000 * 109.46986 * 180.02562 * 4 2 1 34 34 H 1.08993 * 109.47662 * 60.00092 * 4 2 1 35 35 H 0.97005 * 119.99661 * 179.97438 * 8 7 5 36 36 H 1.09000 * 109.46870 * 180.02562 * 13 2 1 37 37 H 1.09004 * 109.47108 * 300.00057 * 13 2 1 38 38 H 0.97003 * 119.99531 * 0.02562 * 14 13 2 39 39 H 1.09010 * 109.88299 * 300.43475 * 18 17 15 40 40 H 1.08998 * 109.88302 * 61.60364 * 18 17 15 41 41 H 1.09003 * 110.71960 * 140.55410 * 19 18 17 42 42 H 1.09003 * 110.71643 * 263.83113 * 19 18 17 43 43 H 1.08998 * 112.84876 * 50.33379 * 22 20 19 44 44 H 1.09001 * 113.61382 * 334.56937 * 23 22 20 45 45 H 1.09002 * 113.60879 * 105.47271 * 23 22 20 46 46 H 1.08997 * 113.54383 * 270.81027 * 24 23 22 47 47 H 1.09010 * 113.73999 * 139.94383 * 24 23 22 48 48 H 1.08999 * 113.61856 * 254.52710 * 25 22 20 49 49 H 1.09003 * 113.61475 * 25.43720 * 25 22 20 50 50 H 1.09000 * 110.36745 * 274.74785 * 26 17 15 51 51 H 1.09001 * 110.37067 * 37.06790 * 26 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0399 -0.7212 1.2493 5 6 1.5375 -0.0106 2.4797 6 1 0.9163 0.8673 2.3806 7 6 1.8710 -0.4814 3.7320 8 7 1.4321 0.1384 4.8057 9 14 2.9460 -1.9994 3.9036 10 1 2.0883 -3.2108 3.9491 11 1 3.8664 -2.0879 2.7416 12 1 3.7378 -1.9061 5.1564 13 6 2.0400 -0.7213 -1.2492 14 7 1.5518 -0.0307 -2.4454 15 6 1.8779 -0.4910 -3.6694 16 8 2.5769 -1.4796 -3.7809 17 7 1.4282 0.1440 -4.7700 18 6 0.5790 1.3441 -4.7799 19 6 0.2984 1.6946 -6.2564 20 6 0.5369 0.3457 -6.9851 21 1 -0.3458 -0.2913 -6.9268 22 6 0.9494 0.5742 -8.4406 23 6 -0.2352 0.8582 -9.3794 24 6 0.4779 -0.0287 -10.4162 25 6 1.1654 -0.7271 -9.2311 26 6 1.7118 -0.2460 -6.1631 27 1 -0.3634 0.5139 0.8899 28 1 -0.3633 0.5137 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 3.1300 1.4425 0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6765 1.9564 0.8899 33 1 3.1299 -0.7208 1.2496 34 1 1.6766 -1.7488 1.2494 35 1 1.6664 -0.1930 5.6868 36 1 3.1300 -0.7216 -1.2489 37 1 1.6767 -1.7490 -1.2491 38 1 0.9944 0.7582 -2.3564 39 1 -0.3586 1.1391 -4.2629 40 1 1.0991 2.1703 -4.2952 41 1 -0.7322 2.0255 -6.3850 42 1 0.9956 2.4534 -6.6118 43 1 1.7674 1.2874 -8.5417 44 1 -1.1802 0.4446 -9.0272 45 1 -0.3145 1.9034 -9.6782 46 1 1.1663 0.5203 -11.0587 47 1 -0.1956 -0.6785 -10.9751 48 1 2.2150 -0.9599 -9.4107 49 1 0.6039 -1.5749 -8.8385 50 1 2.6598 0.1804 -6.4909 51 1 1.7308 -1.3318 -6.2567 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000591195397.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 22:11:47 Heat of formation + Delta-G solvation = -29.808568 kcal Electronic energy + Delta-G solvation = -25980.266704 eV Core-core repulsion = 22493.376233 eV Total energy + Delta-G solvation = -3486.890471 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 308.221 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -40.49507 -39.33149 -37.62406 -36.67316 -33.62584 -32.24749 -31.50053 -29.48163 -27.81457 -26.55847 -26.53927 -25.95285 -24.97135 -23.25733 -22.16193 -20.92406 -19.87769 -19.79832 -18.65290 -17.54477 -16.82570 -16.53927 -15.97329 -15.65021 -15.13953 -14.64420 -14.29701 -14.10299 -13.84703 -13.67578 -13.54369 -13.25880 -12.98686 -12.87351 -12.72288 -12.68847 -12.40919 -12.24685 -12.13015 -12.11813 -11.36551 -11.22755 -11.10045 -11.09777 -10.99374 -10.89894 -10.59890 -10.49332 -10.45795 -10.41976 -10.06223 -9.94860 -9.73012 -9.49430 -8.97655 -8.92240 -8.52146 -8.44672 -6.02955 -4.00011 2.68677 3.33198 3.35409 3.41053 3.45777 3.90390 4.17566 4.20535 4.23578 4.43449 4.45715 4.47264 4.71524 4.80091 4.99036 5.00734 5.18910 5.29909 5.33792 5.34893 5.37800 5.40984 5.44007 5.49402 5.54049 5.56920 5.58400 5.64376 5.66423 5.73989 5.81759 5.95502 6.09289 6.14228 6.14522 6.16714 6.26869 6.35484 6.53826 6.61421 6.76696 6.94382 7.03050 7.06431 7.12997 7.22776 7.39198 7.79578 8.11242 8.54141 8.75570 9.01047 9.59866 11.09714 Molecular weight = 308.22amu Principal moments of inertia in cm(-1) A = 0.037461 B = 0.002378 C = 0.002289 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 747.261257 B =11773.100710 C =12227.808408 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.128 4.128 2 C -0.063 4.063 3 C -0.127 4.127 4 C -0.002 4.002 5 C -0.510 4.510 6 H 0.078 0.922 7 C 0.066 3.934 8 N -0.904 5.904 9 Si 0.875 3.125 10 H -0.278 1.278 11 H -0.265 1.265 12 H -0.289 1.289 13 C 0.144 3.856 14 N -0.734 5.734 15 C 0.718 3.282 16 O -0.593 6.593 17 N -0.642 5.642 18 C 0.098 3.902 19 C -0.123 4.123 20 C -0.092 4.092 21 H 0.085 0.915 22 C -0.099 4.099 23 C -0.135 4.135 24 C -0.144 4.144 25 C -0.139 4.139 26 C 0.133 3.867 27 H 0.072 0.928 28 H 0.029 0.971 29 H 0.047 0.953 30 H 0.047 0.953 31 H 0.029 0.971 32 H 0.072 0.928 33 H 0.019 0.981 34 H 0.014 0.986 35 H 0.262 0.738 36 H 0.061 0.939 37 H 0.061 0.939 38 H 0.395 0.605 39 H 0.065 0.935 40 H 0.065 0.935 41 H 0.081 0.919 42 H 0.077 0.923 43 H 0.092 0.908 44 H 0.081 0.919 45 H 0.066 0.934 46 H 0.078 0.922 47 H 0.066 0.934 48 H 0.068 0.932 49 H 0.082 0.918 50 H 0.063 0.937 51 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.936 4.134 -28.740 29.302 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.185 4.185 2 C -0.063 4.063 3 C -0.185 4.185 4 C -0.040 4.040 5 C -0.548 4.548 6 H 0.096 0.904 7 C -0.135 4.135 8 N -0.543 5.543 9 Si 0.703 3.297 10 H -0.204 1.204 11 H -0.190 1.190 12 H -0.215 1.215 13 C 0.021 3.979 14 N -0.390 5.390 15 C 0.420 3.580 16 O -0.472 6.472 17 N -0.381 5.381 18 C -0.026 4.026 19 C -0.161 4.161 20 C -0.111 4.111 21 H 0.104 0.896 22 C -0.117 4.117 23 C -0.172 4.172 24 C -0.182 4.182 25 C -0.176 4.176 26 C 0.010 3.990 27 H 0.091 0.909 28 H 0.048 0.952 29 H 0.066 0.934 30 H 0.066 0.934 31 H 0.048 0.952 32 H 0.091 0.909 33 H 0.037 0.963 34 H 0.032 0.968 35 H 0.072 0.928 36 H 0.080 0.920 37 H 0.080 0.920 38 H 0.230 0.770 39 H 0.083 0.917 40 H 0.084 0.916 41 H 0.100 0.900 42 H 0.095 0.905 43 H 0.110 0.890 44 H 0.099 0.901 45 H 0.085 0.915 46 H 0.097 0.903 47 H 0.085 0.915 48 H 0.086 0.914 49 H 0.101 0.899 50 H 0.081 0.919 51 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -3.368 3.342 -28.504 28.896 hybrid contribution 0.284 -0.387 0.381 0.613 sum -3.084 2.954 -28.123 28.446 Atomic orbital electron populations 1.21766 0.94857 1.01239 1.00625 1.20694 0.95794 0.95915 0.93902 1.21762 1.00467 0.95622 1.00626 1.19593 0.96331 0.95518 0.92548 1.21079 1.31757 1.13332 0.88609 0.90407 1.25005 0.95738 0.96782 0.95997 1.69906 1.45972 1.40587 0.97861 0.86851 0.81351 0.83892 0.77647 1.20381 1.18951 1.21530 1.21505 0.98648 0.95658 0.82134 1.45330 1.56126 1.33204 1.04292 1.15518 0.80238 0.82429 0.79822 1.90908 1.43109 1.27575 1.85581 1.47562 1.54765 1.30506 1.05277 1.21994 0.94690 0.87858 0.98013 1.22635 1.02634 0.97438 0.93344 1.22448 0.98298 0.96724 0.93615 0.89648 1.22484 0.98752 0.98367 0.92122 1.22955 0.97608 1.00037 0.96606 1.22850 0.99770 0.99063 0.96504 1.22949 1.01167 0.97010 0.96483 1.22041 0.97152 1.00623 0.79180 0.90898 0.95176 0.93400 0.93388 0.95162 0.90899 0.96312 0.96759 0.92824 0.92035 0.92046 0.76993 0.91650 0.91640 0.90024 0.90450 0.88966 0.90062 0.91516 0.90316 0.91548 0.91368 0.89949 0.91904 0.90575 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.25 8.05 37.16 0.30 -1.95 16 2 C -0.06 -1.17 0.54 -154.51 -0.08 -1.25 16 3 C -0.13 -2.25 8.05 37.16 0.30 -1.95 16 4 C 0.00 -0.05 3.11 -27.88 -0.09 -0.13 16 5 C -0.51 -13.72 8.20 -34.44 -0.28 -14.00 16 6 H 0.08 2.21 5.92 -52.49 -0.31 1.90 16 7 C 0.07 1.87 5.47 -17.82 -0.10 1.77 16 8 N -0.90 -27.31 13.96 55.43 0.77 -26.54 16 9 Si 0.87 21.70 27.47 -169.99 -4.67 17.03 16 10 H -0.28 -6.82 7.11 56.52 0.40 -6.42 16 11 H -0.26 -6.38 6.54 56.52 0.37 -6.01 16 12 H -0.29 -7.16 7.11 56.52 0.40 -6.76 16 13 C 0.14 2.55 4.56 -4.04 -0.02 2.53 16 14 N -0.73 -11.20 4.92 -65.22 -0.32 -11.52 16 15 C 0.72 11.71 8.49 -86.91 -0.74 10.97 16 16 O -0.59 -12.07 16.60 5.29 0.09 -11.98 16 17 N -0.64 -7.88 3.32 -176.10 -0.59 -8.47 16 18 C 0.10 0.85 6.15 -3.07 -0.02 0.84 16 19 C -0.12 -0.78 6.42 -24.90 -0.16 -0.94 16 20 C -0.09 -0.64 2.72 -88.35 -0.24 -0.88 16 21 H 0.09 0.63 8.12 -51.93 -0.42 0.21 16 22 C -0.10 -0.57 3.07 -89.81 -0.28 -0.85 16 23 C -0.13 -0.69 7.66 -25.83 -0.20 -0.89 16 24 C -0.14 -0.76 8.09 -25.83 -0.21 -0.97 16 25 C -0.14 -0.83 7.45 -25.92 -0.19 -1.03 16 26 C 0.13 1.37 6.19 -2.42 -0.01 1.35 16 27 H 0.07 1.43 6.62 -51.93 -0.34 1.08 16 28 H 0.03 0.43 6.86 -51.93 -0.36 0.08 16 29 H 0.05 0.85 8.14 -51.93 -0.42 0.42 16 30 H 0.05 0.85 8.14 -51.93 -0.42 0.43 16 31 H 0.03 0.44 6.86 -51.93 -0.36 0.08 16 32 H 0.07 1.43 6.62 -51.93 -0.34 1.08 16 33 H 0.02 0.44 7.20 -51.93 -0.37 0.07 16 34 H 0.01 0.33 7.57 -51.93 -0.39 -0.06 16 35 H 0.26 7.49 8.31 -40.82 -0.34 7.15 16 36 H 0.06 1.15 8.14 -51.93 -0.42 0.73 16 37 H 0.06 1.14 8.14 -51.93 -0.42 0.72 16 38 H 0.39 5.19 5.15 -40.82 -0.21 4.98 16 39 H 0.07 0.55 8.14 -51.92 -0.42 0.12 16 40 H 0.07 0.55 8.14 -51.93 -0.42 0.12 16 41 H 0.08 0.42 8.14 -51.93 -0.42 -0.01 16 42 H 0.08 0.45 8.04 -51.93 -0.42 0.03 16 43 H 0.09 0.53 8.14 -51.93 -0.42 0.10 16 44 H 0.08 0.42 8.08 -51.93 -0.42 0.00 16 45 H 0.07 0.32 8.14 -51.93 -0.42 -0.11 16 46 H 0.08 0.38 8.14 -51.93 -0.42 -0.04 16 47 H 0.07 0.34 8.14 -51.92 -0.42 -0.09 16 48 H 0.07 0.42 8.14 -51.93 -0.42 -0.01 16 49 H 0.08 0.52 8.10 -51.93 -0.42 0.10 16 50 H 0.06 0.63 8.04 -51.93 -0.42 0.22 16 51 H 0.08 0.89 8.03 -51.93 -0.42 0.47 16 LS Contribution 388.45 15.07 5.85 5.85 Total: -1.00 -32.09 388.45 -10.32 -42.41 By element: Atomic # 1 Polarization: 10.04 SS G_CDS: -9.44 Total: 0.60 kcal Atomic # 6 Polarization: -5.37 SS G_CDS: -2.02 Total: -7.39 kcal Atomic # 7 Polarization: -46.39 SS G_CDS: -0.13 Total: -46.53 kcal Atomic # 8 Polarization: -12.07 SS G_CDS: 0.09 Total: -11.98 kcal Atomic # 14 Polarization: 21.70 SS G_CDS: -4.67 Total: 17.03 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -32.09 -10.32 -42.41 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000591195397.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 12.603 kcal (2) G-P(sol) polarization free energy of solvation -32.092 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.489 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.319 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.411 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.809 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds