Wall clock time and date at job start Fri Apr 10 2020 22:16:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35895 * 117.00358 * 2 1 4 4 C 1.38737 * 120.04818 * 359.97438 * 3 2 1 5 5 C 1.38232 * 119.93099 * 180.02562 * 4 3 2 6 6 Cl 1.73608 * 119.98424 * 180.02562 * 5 4 3 7 7 C 1.38409 * 120.03295 * 359.97438 * 5 4 3 8 8 C 1.38228 * 120.09470 * 0.28254 * 7 5 4 9 9 C 1.38173 * 120.06780 * 359.44089 * 8 7 5 10 10 C 1.50695 * 120.01507 * 180.27978 * 9 8 7 11 11 N 1.46899 * 109.47191 * 260.28178 * 10 9 8 12 12 C 1.46849 * 111.00203 * 45.78256 * 11 10 9 13 13 C 1.53040 * 109.52061 * 185.84038 * 12 11 10 14 14 C 1.53112 * 109.28329 * 300.82469 * 13 12 11 15 15 C 1.53114 * 109.16042 * 57.65352 * 14 13 12 16 16 H 1.09004 * 109.50561 * 62.28550 * 15 14 13 17 17 C 1.50707 * 109.50630 * 182.40689 * 15 14 13 18 18 H 1.07995 * 119.99928 * 119.80198 * 17 15 14 19 19 C 1.37877 * 119.99621 * 299.80787 * 17 15 14 20 20 N 1.31508 * 120.00152 * 179.97438 * 19 17 15 21 21 Si 1.86801 * 119.99983 * 359.97438 * 19 17 15 22 22 H 1.48505 * 109.47028 * 90.00442 * 21 19 17 23 23 H 1.48507 * 109.47191 * 209.99927 * 21 19 17 24 24 H 1.48494 * 109.47440 * 330.00522 * 21 19 17 25 25 C 1.46847 * 111.00116 * 169.99944 * 11 10 9 26 26 H 1.08996 * 109.47146 * 179.97438 * 1 2 3 27 27 H 1.08995 * 109.46919 * 300.00416 * 1 2 3 28 28 H 1.09005 * 109.46668 * 60.00512 * 1 2 3 29 29 H 1.08004 * 120.03100 * 0.04190 * 4 3 2 30 30 H 1.08002 * 119.94941 * 179.97438 * 7 5 4 31 31 H 1.07998 * 119.95740 * 179.72333 * 8 7 5 32 32 H 1.09007 * 109.46854 * 20.27532 * 10 9 8 33 33 H 1.08998 * 109.47256 * 140.27873 * 10 9 8 34 34 H 1.08997 * 109.46189 * 305.86113 * 12 11 10 35 35 H 1.09000 * 109.45671 * 65.83039 * 12 11 10 36 36 H 1.09003 * 109.49964 * 180.88270 * 13 12 11 37 37 H 1.09001 * 109.50055 * 60.76749 * 13 12 11 38 38 H 1.09004 * 109.52149 * 297.75338 * 14 13 12 39 39 H 1.08997 * 109.57831 * 177.59541 * 14 13 12 40 40 H 0.97000 * 120.00891 * 179.97438 * 20 19 17 41 41 H 1.08993 * 109.46031 * 294.17187 * 25 11 10 42 42 H 1.08999 * 109.46453 * 54.14244 * 25 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 1.2915 2.3750 -0.0005 5 6 1.9216 3.6054 -0.0011 6 17 0.9787 5.0631 -0.0011 7 6 3.3039 3.6757 -0.0005 8 6 4.0569 2.5165 -0.0054 9 6 3.4313 1.2845 0.0009 10 6 4.2534 0.0216 0.0020 11 7 4.3196 -0.5208 -1.3616 12 6 4.6164 0.5377 -2.3352 13 6 4.5340 -0.0334 -3.7526 14 6 5.5387 -1.1800 -3.8949 15 6 5.2374 -2.2463 -2.8382 16 1 4.2412 -2.6551 -3.0074 17 6 6.2582 -3.3510 -2.9328 18 1 6.8885 -3.5777 -2.0857 19 6 6.3873 -4.0721 -4.1009 20 7 7.2784 -5.0357 -4.1836 21 14 5.2966 -3.6802 -5.5658 22 1 5.9581 -2.6579 -6.4160 23 1 5.0722 -4.9147 -6.3603 24 1 3.9926 -3.1564 -5.0861 25 6 5.2995 -1.6111 -1.4473 26 1 -0.3633 -1.0276 -0.0005 27 1 -0.3633 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8901 29 1 0.2128 2.3201 -0.0003 30 1 3.7949 4.6377 -0.0014 31 1 5.1353 2.5740 -0.0095 32 1 5.2608 0.2442 0.3538 33 1 3.7916 -0.7120 0.6628 34 1 3.8921 1.3449 -2.2261 35 1 5.6200 0.9239 -2.1570 36 1 4.7696 0.7487 -4.4743 37 1 3.5267 -0.4074 -3.9362 38 1 6.5495 -0.7986 -3.7496 39 1 5.4542 -1.6183 -4.8893 40 1 7.3691 -5.5433 -5.0052 41 1 6.2998 -1.2148 -1.2733 42 1 5.0713 -2.3646 -0.6934 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000595623595.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 22:16:34 Heat of formation + Delta-G solvation = -14.925974 kcal Electronic energy + Delta-G solvation = -23753.311313 eV Core-core repulsion = 20338.390513 eV Total energy + Delta-G solvation = -3414.920800 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 309.124 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -40.57085 -38.42345 -37.70516 -36.53657 -34.16742 -32.28590 -30.90051 -30.37648 -30.14051 -27.51137 -26.03425 -24.87795 -22.73711 -22.51942 -21.69508 -20.61619 -18.81203 -18.24218 -16.71921 -16.62218 -16.01864 -15.95016 -15.46251 -15.04766 -14.36912 -14.26342 -14.04329 -13.73202 -13.52728 -13.40284 -13.30980 -12.81113 -12.35381 -12.32702 -12.11726 -11.98948 -11.91123 -11.40005 -11.20268 -11.11791 -11.09772 -11.00390 -10.85649 -10.43836 -10.03535 -9.91440 -9.63807 -9.07074 -9.01400 -8.88256 -8.48016 -8.31878 -7.70394 -6.03627 -4.02363 0.90121 1.16235 1.85838 3.15834 3.31459 3.38947 3.42508 3.46639 4.46016 4.47585 4.55900 4.65147 4.83615 4.87870 5.01521 5.06761 5.28431 5.32136 5.36543 5.43550 5.47399 5.54159 5.65369 5.78977 5.91872 5.95261 6.04538 6.04993 6.17871 6.27488 6.34169 6.38393 6.45354 6.54100 6.66345 6.86077 6.89139 7.21350 7.25489 7.46837 7.65554 7.70730 7.91691 8.55987 8.99811 9.59593 11.09686 Molecular weight = 309.12amu Principal moments of inertia in cm(-1) A = 0.023576 B = 0.003437 C = 0.003372 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1187.359643 B = 8145.336842 C = 8301.353687 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.290 6.290 3 C 0.163 3.837 4 C -0.207 4.207 5 C 0.002 3.998 6 Cl -0.075 7.075 7 C -0.150 4.150 8 C -0.065 4.065 9 C -0.102 4.102 10 C 0.102 3.898 11 N -0.530 5.530 12 C 0.062 3.938 13 C -0.119 4.119 14 C -0.122 4.122 15 C 0.021 3.979 16 H 0.035 0.965 17 C -0.513 4.513 18 H 0.072 0.928 19 C 0.070 3.930 20 N -0.903 5.903 21 Si 0.887 3.113 22 H -0.281 1.281 23 H -0.299 1.299 24 H -0.263 1.263 25 C 0.078 3.922 26 H 0.103 0.897 27 H 0.052 0.948 28 H 0.055 0.945 29 H 0.137 0.863 30 H 0.133 0.867 31 H 0.137 0.863 32 H 0.039 0.961 33 H 0.086 0.914 34 H 0.064 0.936 35 H 0.026 0.974 36 H 0.051 0.949 37 H 0.061 0.939 38 H 0.055 0.945 39 H 0.045 0.955 40 H 0.263 0.737 41 H 0.026 0.974 42 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.830 18.074 9.564 24.140 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.202 6.202 3 C 0.116 3.884 4 C -0.226 4.226 5 C -0.025 4.025 6 Cl -0.046 7.046 7 C -0.169 4.169 8 C -0.084 4.084 9 C -0.103 4.103 10 C -0.026 4.026 11 N -0.255 5.255 12 C -0.066 4.066 13 C -0.157 4.157 14 C -0.159 4.159 15 C 0.002 3.998 16 H 0.054 0.946 17 C -0.551 4.551 18 H 0.090 0.910 19 C -0.131 4.131 20 N -0.542 5.542 21 Si 0.718 3.282 22 H -0.208 1.208 23 H -0.227 1.227 24 H -0.188 1.188 25 C -0.049 4.049 26 H 0.121 0.879 27 H 0.071 0.929 28 H 0.074 0.926 29 H 0.155 0.845 30 H 0.151 0.849 31 H 0.155 0.845 32 H 0.057 0.943 33 H 0.104 0.896 34 H 0.082 0.918 35 H 0.044 0.956 36 H 0.070 0.930 37 H 0.080 0.920 38 H 0.074 0.926 39 H 0.063 0.937 40 H 0.073 0.927 41 H 0.044 0.956 42 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -13.215 17.647 9.344 23.945 hybrid contribution -0.050 0.823 -0.772 1.130 sum -13.265 18.470 8.572 24.302 Atomic orbital electron populations 1.23109 0.78630 1.04319 1.01002 1.86273 1.20918 1.25405 1.87566 1.18628 0.91496 0.84031 0.94273 1.21052 1.00629 0.90663 1.10300 1.20581 0.91796 0.86869 1.03239 1.98365 1.72967 1.36364 1.96882 1.20883 0.91398 0.99444 1.05177 1.20911 1.00152 0.90360 0.97003 1.19375 0.90922 0.95969 1.04041 1.20906 0.96635 0.92587 0.92446 1.62136 1.50893 1.10034 1.02403 1.22041 0.98221 0.93513 0.92840 1.21643 1.00788 0.98299 0.94931 1.22015 0.97774 0.96062 1.00059 1.19150 0.97961 0.92974 0.89725 0.94643 1.21013 1.18927 1.14822 1.00335 0.90962 1.24976 0.94946 0.94632 0.98548 1.69896 1.34722 1.22033 1.27542 0.86832 0.82165 0.76407 0.82790 1.20764 1.22681 1.18798 1.22094 0.91089 0.91505 1.00185 0.87891 0.92892 0.92642 0.84536 0.84923 0.84538 0.94259 0.89609 0.91781 0.95619 0.93000 0.91981 0.92626 0.93652 0.92735 0.95569 0.91411 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.22 9.81 101.05 0.99 1.21 16 2 O -0.29 -3.76 9.73 -19.41 -0.19 -3.95 16 3 C 0.16 2.05 6.66 -39.22 -0.26 1.79 16 4 C -0.21 -2.27 8.82 -39.40 -0.35 -2.62 16 5 C 0.00 0.02 6.32 -39.52 -0.25 -0.23 16 6 Cl -0.07 -0.72 28.95 -51.86 -1.50 -2.22 16 7 C -0.15 -1.53 9.83 -39.52 -0.39 -1.92 16 8 C -0.07 -0.71 8.61 -39.61 -0.34 -1.06 16 9 C -0.10 -1.30 3.71 -104.47 -0.39 -1.69 16 10 C 0.10 1.46 5.07 -4.98 -0.03 1.44 16 11 N -0.53 -9.24 4.80 -236.11 -1.13 -10.37 16 12 C 0.06 1.02 4.80 -3.83 -0.02 1.00 16 13 C -0.12 -2.16 6.09 -26.65 -0.16 -2.33 16 14 C -0.12 -2.66 4.74 -26.61 -0.13 -2.79 16 15 C 0.02 0.50 1.85 -91.69 -0.17 0.33 16 16 H 0.04 0.89 7.19 -51.93 -0.37 0.52 16 17 C -0.51 -14.39 9.14 -34.44 -0.31 -14.70 16 18 H 0.07 2.18 7.99 -52.49 -0.42 1.76 16 19 C 0.07 2.04 5.45 -17.82 -0.10 1.94 16 20 N -0.90 -27.82 13.96 55.43 0.77 -27.04 16 21 Si 0.89 22.33 24.36 -169.99 -4.14 18.19 16 22 H -0.28 -6.89 6.89 56.52 0.39 -6.50 16 23 H -0.30 -7.54 7.11 56.52 0.40 -7.14 16 24 H -0.26 -6.41 6.53 56.52 0.37 -6.05 16 25 C 0.08 1.58 4.65 -3.83 -0.02 1.56 16 26 H 0.10 0.77 8.14 -51.93 -0.42 0.34 16 27 H 0.05 0.37 7.66 -51.93 -0.40 -0.03 16 28 H 0.05 0.45 7.66 -51.93 -0.40 0.05 16 29 H 0.14 1.25 6.30 -52.48 -0.33 0.92 16 30 H 0.13 1.11 8.06 -52.49 -0.42 0.68 16 31 H 0.14 1.29 8.04 -52.49 -0.42 0.86 16 32 H 0.04 0.53 7.94 -51.92 -0.41 0.12 16 33 H 0.09 1.25 7.85 -51.93 -0.41 0.84 16 34 H 0.06 0.98 6.02 -51.93 -0.31 0.67 16 35 H 0.03 0.41 8.14 -51.93 -0.42 -0.01 16 36 H 0.05 0.84 8.14 -51.93 -0.42 0.41 16 37 H 0.06 1.17 8.14 -51.93 -0.42 0.74 16 38 H 0.05 1.22 8.14 -51.93 -0.42 0.79 16 39 H 0.05 1.05 3.37 -51.93 -0.17 0.88 16 40 H 0.26 7.61 8.31 -40.82 -0.34 7.27 16 41 H 0.03 0.53 8.14 -51.93 -0.42 0.11 16 42 H 0.07 1.37 8.12 -51.93 -0.42 0.95 16 LS Contribution 341.24 15.07 5.14 5.14 Total: -1.00 -30.91 341.24 -9.17 -40.09 By element: Atomic # 1 Polarization: 4.43 SS G_CDS: -6.21 Total: -1.78 kcal Atomic # 6 Polarization: -16.14 SS G_CDS: -1.92 Total: -18.06 kcal Atomic # 7 Polarization: -37.06 SS G_CDS: -0.36 Total: -37.42 kcal Atomic # 8 Polarization: -3.76 SS G_CDS: -0.19 Total: -3.95 kcal Atomic # 14 Polarization: 22.33 SS G_CDS: -4.14 Total: 18.19 kcal Atomic # 17 Polarization: -0.72 SS G_CDS: -1.50 Total: -2.22 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -30.91 -9.17 -40.09 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000595623595.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.162 kcal (2) G-P(sol) polarization free energy of solvation -30.915 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.753 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.173 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.088 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.926 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds