Wall clock time and date at job start Fri Apr 10 2020 22:22:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35684 * 117.00073 * 2 1 4 4 N 1.32302 * 119.67333 * 359.72722 * 3 2 1 5 5 C 1.32025 * 121.62668 * 179.71216 * 4 3 2 6 6 Cl 1.73602 * 119.59532 * 180.26958 * 5 4 3 7 7 C 1.38259 * 120.80086 * 0.56453 * 5 4 3 8 8 C 1.38721 * 119.27596 * 359.72689 * 7 5 4 9 9 C 1.38463 * 118.50127 * 359.97438 * 8 7 5 10 10 C 1.50694 * 120.42738 * 180.02562 * 9 8 7 11 11 N 1.46900 * 109.47763 * 259.98045 * 10 9 8 12 12 C 1.46851 * 110.99404 * 45.79398 * 11 10 9 13 13 C 1.53042 * 109.52451 * 185.84305 * 12 11 10 14 14 C 1.53121 * 109.27535 * 300.81908 * 13 12 11 15 15 C 1.50700 * 109.57657 * 177.58800 * 14 13 12 16 16 H 1.07998 * 120.00003 * 245.71490 * 15 14 13 17 17 C 1.37873 * 119.99544 * 65.71496 * 15 14 13 18 18 N 1.31514 * 120.00299 * 9.55217 * 17 15 14 19 19 Si 1.86807 * 119.99917 * 189.55640 * 17 15 14 20 20 H 1.48496 * 109.47282 * 94.98853 * 19 17 15 21 21 H 1.48500 * 109.47273 * 214.99425 * 19 17 15 22 22 H 1.48508 * 109.46843 * 334.99147 * 19 17 15 23 23 C 1.53124 * 109.15962 * 57.65114 * 14 13 12 24 24 C 1.46844 * 111.00453 * 169.99809 * 11 10 9 25 25 H 1.08997 * 109.47026 * 179.97438 * 1 2 3 26 26 H 1.08997 * 109.47245 * 300.00003 * 1 2 3 27 27 H 1.09005 * 109.47088 * 59.99907 * 1 2 3 28 28 H 1.07999 * 120.36180 * 179.75056 * 7 5 4 29 29 H 1.08001 * 120.74966 * 180.02562 * 8 7 5 30 30 H 1.09004 * 109.47424 * 19.98392 * 10 9 8 31 31 H 1.09001 * 109.46910 * 139.98528 * 10 9 8 32 32 H 1.09004 * 109.46397 * 305.85090 * 12 11 10 33 33 H 1.08999 * 109.46694 * 65.82496 * 12 11 10 34 34 H 1.08992 * 109.50883 * 180.87668 * 13 12 11 35 35 H 1.08997 * 109.53547 * 60.77285 * 13 12 11 36 36 H 1.09003 * 109.52359 * 297.74826 * 14 13 12 37 37 H 0.97003 * 119.99850 * 179.97438 * 18 17 15 38 38 H 1.09002 * 109.50368 * 182.40459 * 23 14 13 39 39 H 1.09001 * 109.53487 * 62.31165 * 23 14 13 40 40 H 1.08998 * 109.46332 * 294.18170 * 24 11 10 41 41 H 1.09005 * 109.45625 * 54.16226 * 24 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0450 1.2089 0.0000 4 7 1.3182 2.3144 -0.0055 5 6 1.8771 3.5105 0.0000 6 17 0.8725 4.9263 -0.0006 7 6 3.2527 3.6491 0.0000 8 6 4.0490 2.5132 -0.0001 9 6 3.4319 1.2737 0.0004 10 6 4.2549 0.0114 0.0010 11 7 4.3206 -0.5311 -1.3626 12 6 4.6162 0.5277 -2.3364 13 6 4.5333 -0.0435 -3.7538 14 6 5.5389 -1.1893 -3.8967 15 6 5.4216 -1.7956 -5.2713 16 1 5.0746 -2.8119 -5.3855 17 6 5.7573 -1.0527 -6.3832 18 7 6.3542 0.1105 -6.2413 19 14 5.3641 -1.6984 -8.0915 20 1 4.0665 -1.1375 -8.5462 21 1 6.4370 -1.2908 -9.0339 22 1 5.2763 -3.1803 -8.0524 23 6 5.2389 -2.2559 -2.8397 24 6 5.3013 -1.6206 -1.4489 25 1 -0.3633 -1.0276 -0.0005 26 1 -0.3633 0.5138 0.8899 27 1 -0.3633 0.5139 -0.8900 28 1 3.7024 4.6311 0.0004 29 1 5.1260 2.5939 0.0003 30 1 5.2624 0.2347 0.3521 31 1 3.7940 -0.7225 0.6621 32 1 3.8914 1.3344 -2.2270 33 1 5.6196 0.9146 -2.1589 34 1 4.7680 0.7387 -4.4757 35 1 3.5264 -0.4180 -3.9375 36 1 6.5495 -0.8073 -3.7520 37 1 6.5907 0.6330 -7.0236 38 1 5.9777 -3.0544 -2.9086 39 1 4.2432 -2.6661 -3.0082 40 1 6.3015 -1.2236 -1.2755 41 1 5.0740 -2.3743 -0.6950 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001237244377.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 22:22:40 Heat of formation + Delta-G solvation = -9.605223 kcal Electronic energy + Delta-G solvation = -23840.835816 eV Core-core repulsion = 20360.719830 eV Total energy + Delta-G solvation = -3480.115986 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 310.119 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -40.95301 -38.28113 -37.99123 -36.67253 -34.47400 -32.72142 -31.56588 -30.32561 -29.81040 -27.38793 -26.68300 -24.63882 -23.27960 -22.54381 -21.98886 -20.91572 -18.65198 -18.47992 -17.43550 -16.43035 -16.15293 -15.87264 -15.27570 -15.00325 -14.43065 -14.41518 -13.99831 -13.89080 -13.64205 -13.41623 -12.92931 -12.54495 -12.43138 -12.05995 -11.95966 -11.93580 -11.47740 -11.42394 -11.34063 -11.01174 -10.95287 -10.76532 -10.44777 -10.21867 -10.08413 -9.91238 -9.89744 -9.41698 -8.88626 -8.72776 -8.45988 -8.27049 -7.72208 -5.98218 -3.98581 0.79178 1.08113 1.59573 3.04792 3.33198 3.40475 3.43581 3.45646 4.27493 4.46771 4.48753 4.66958 4.76954 4.91328 5.11051 5.23315 5.29750 5.34224 5.43565 5.59908 5.65448 5.72165 5.81060 5.89165 5.97903 6.12074 6.16194 6.18538 6.33125 6.55752 6.64766 6.84139 7.07237 7.10001 7.14218 7.38087 7.49978 7.60556 7.67180 7.83568 8.04235 8.07461 8.50560 9.05326 9.64483 11.11039 Molecular weight = 310.12amu Principal moments of inertia in cm(-1) A = 0.015948 B = 0.003697 C = 0.003441 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1755.298963 B = 7571.574972 C = 8135.521144 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.039 3.961 2 O -0.283 6.283 3 C 0.360 3.640 4 N -0.539 5.539 5 C 0.211 3.789 6 Cl -0.035 7.035 7 C -0.191 4.191 8 C -0.027 4.027 9 C -0.138 4.138 10 C 0.106 3.894 11 N -0.525 5.525 12 C 0.058 3.942 13 C -0.098 4.098 14 C 0.047 3.953 15 C -0.512 4.512 16 H 0.054 0.946 17 C 0.063 3.937 18 N -0.890 5.890 19 Si 0.885 3.115 20 H -0.281 1.281 21 H -0.288 1.288 22 H -0.274 1.274 23 C -0.105 4.105 24 C 0.061 3.939 25 H 0.097 0.903 26 H 0.055 0.945 27 H 0.060 0.940 28 H 0.147 0.853 29 H 0.150 0.850 30 H 0.040 0.960 31 H 0.085 0.915 32 H 0.052 0.948 33 H 0.023 0.977 34 H 0.073 0.927 35 H 0.044 0.956 36 H 0.028 0.972 37 H 0.259 0.741 38 H 0.051 0.949 39 H 0.056 0.944 40 H 0.025 0.975 41 H 0.059 0.941 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.451 6.158 16.370 19.011 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.188 6.188 3 C 0.180 3.820 4 N -0.266 5.266 5 C 0.048 3.952 6 Cl -0.007 7.007 7 C -0.212 4.212 8 C -0.053 4.053 9 C -0.141 4.141 10 C -0.022 4.022 11 N -0.250 5.250 12 C -0.070 4.070 13 C -0.136 4.136 14 C 0.028 3.972 15 C -0.550 4.550 16 H 0.073 0.927 17 C -0.138 4.138 18 N -0.529 5.529 19 Si 0.713 3.287 20 H -0.208 1.208 21 H -0.214 1.214 22 H -0.199 1.199 23 C -0.143 4.143 24 C -0.066 4.066 25 H 0.116 0.884 26 H 0.074 0.926 27 H 0.078 0.922 28 H 0.165 0.835 29 H 0.168 0.832 30 H 0.058 0.942 31 H 0.103 0.897 32 H 0.071 0.929 33 H 0.041 0.959 34 H 0.091 0.909 35 H 0.063 0.937 36 H 0.046 0.954 37 H 0.068 0.932 38 H 0.070 0.930 39 H 0.075 0.925 40 H 0.043 0.957 41 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges -8.732 5.857 16.136 19.259 hybrid contribution 0.965 0.539 -0.878 1.411 sum -7.767 6.396 15.258 18.277 Atomic orbital electron populations 1.22890 0.77398 1.03148 1.02224 1.86397 1.22523 1.23083 1.86805 1.19310 0.88488 0.83642 0.90555 1.66508 1.41463 0.97813 1.20783 1.21139 0.88569 0.87320 0.98207 1.98402 1.70843 1.35009 1.96428 1.21609 0.91584 1.00855 1.07179 1.21395 1.00865 0.90132 0.92885 1.19934 0.91400 0.96862 1.05933 1.20861 0.96405 0.92128 0.92854 1.62136 1.49851 1.10699 1.02286 1.22278 0.97412 0.92718 0.94566 1.21580 0.99935 1.00451 0.91658 1.18692 0.94806 0.91050 0.92626 1.21186 1.43758 0.99124 0.90937 0.92733 1.24950 0.94708 0.95204 0.98907 1.69965 1.40089 1.13248 1.29609 0.86699 0.78061 0.79233 0.84739 1.20764 1.21408 1.19906 1.21666 1.00802 0.98949 0.92889 1.22136 0.92111 0.92925 0.99445 0.88417 0.92598 0.92173 0.83547 0.83228 0.94189 0.89687 0.92934 0.95886 0.90891 0.93698 0.95431 0.93166 0.93021 0.92510 0.95667 0.92231 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.43 10.38 101.05 1.05 1.48 16 2 O -0.28 -4.08 9.73 -18.75 -0.18 -4.26 16 3 C 0.36 5.27 7.47 -17.13 -0.13 5.14 16 4 N -0.54 -7.74 9.20 -10.43 -0.10 -7.84 16 5 C 0.21 2.71 7.27 -17.46 -0.13 2.58 16 6 Cl -0.04 -0.40 29.11 -51.86 -1.51 -1.91 16 7 C -0.19 -2.14 9.87 -39.40 -0.39 -2.53 16 8 C -0.03 -0.32 8.81 -39.32 -0.35 -0.66 16 9 C -0.14 -1.89 3.70 -104.32 -0.39 -2.28 16 10 C 0.11 1.48 5.09 -4.98 -0.03 1.45 16 11 N -0.52 -9.14 4.80 -236.11 -1.13 -10.27 16 12 C 0.06 1.11 4.82 -3.83 -0.02 1.09 16 13 C -0.10 -2.30 5.19 -26.65 -0.14 -2.44 16 14 C 0.05 1.16 2.03 -91.65 -0.19 0.97 16 15 C -0.51 -14.12 8.48 -34.44 -0.29 -14.41 16 16 H 0.05 1.50 7.77 -52.49 -0.41 1.09 16 17 C 0.06 1.77 5.23 -17.82 -0.09 1.68 16 18 N -0.89 -25.64 12.20 55.43 0.68 -24.96 16 19 Si 0.88 21.45 29.55 -169.99 -5.02 16.43 16 20 H -0.28 -6.80 7.11 56.52 0.40 -6.40 16 21 H -0.29 -6.94 7.11 56.52 0.40 -6.54 16 22 H -0.27 -6.56 7.11 56.52 0.40 -6.16 16 23 C -0.11 -2.19 5.32 -26.65 -0.14 -2.33 16 24 C 0.06 1.07 5.42 -3.84 -0.02 1.05 16 25 H 0.10 0.86 8.14 -51.93 -0.42 0.43 16 26 H 0.06 0.57 8.11 -51.93 -0.42 0.15 16 27 H 0.06 0.70 8.10 -51.93 -0.42 0.28 16 28 H 0.15 1.26 8.06 -52.49 -0.42 0.84 16 29 H 0.15 1.43 8.06 -52.49 -0.42 1.01 16 30 H 0.04 0.51 7.97 -51.93 -0.41 0.09 16 31 H 0.08 1.14 7.87 -51.93 -0.41 0.73 16 32 H 0.05 0.99 6.03 -51.93 -0.31 0.67 16 33 H 0.02 0.45 8.14 -51.93 -0.42 0.02 16 34 H 0.07 1.90 7.00 -51.93 -0.36 1.54 16 35 H 0.04 1.09 8.14 -51.93 -0.42 0.67 16 36 H 0.03 0.75 8.09 -51.93 -0.42 0.33 16 37 H 0.26 7.12 8.31 -40.82 -0.34 6.78 16 38 H 0.05 1.04 8.14 -51.93 -0.42 0.62 16 39 H 0.06 1.21 8.14 -51.93 -0.42 0.79 16 40 H 0.03 0.44 8.14 -51.93 -0.42 0.02 16 41 H 0.06 0.91 8.12 -51.93 -0.42 0.49 16 LS Contribution 347.30 15.07 5.23 5.23 Total: -1.00 -29.94 347.30 -9.38 -39.33 By element: Atomic # 1 Polarization: 3.56 SS G_CDS: -6.11 Total: -2.55 kcal Atomic # 6 Polarization: -7.96 SS G_CDS: -1.24 Total: -9.20 kcal Atomic # 7 Polarization: -42.52 SS G_CDS: -0.55 Total: -43.07 kcal Atomic # 8 Polarization: -4.08 SS G_CDS: -0.18 Total: -4.26 kcal Atomic # 14 Polarization: 21.45 SS G_CDS: -5.02 Total: 16.43 kcal Atomic # 17 Polarization: -0.40 SS G_CDS: -1.51 Total: -1.91 kcal Total LS contribution 5.23 Total: 5.23 kcal Total: -29.94 -9.38 -39.33 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001237244377.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.723 kcal (2) G-P(sol) polarization free energy of solvation -29.945 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.222 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.384 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.328 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.605 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds