Wall clock time and date at job start Fri Apr 10 2020 22:27:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53001 * 109.47183 * 2 1 4 4 C 1.52999 * 109.47124 * 120.00065 * 2 1 3 5 5 H 1.08997 * 110.41955 * 296.57974 * 4 2 1 6 6 O 1.44424 * 110.37217 * 58.88876 * 4 2 1 7 7 C 1.44423 * 105.27506 * 159.34160 * 6 4 2 8 8 C 1.54484 * 104.80266 * 319.49136 * 7 6 4 9 9 C 1.54477 * 110.37169 * 174.27404 * 4 2 1 10 10 H 1.09000 * 110.63184 * 98.48679 * 9 4 2 11 11 C 1.50707 * 110.51131 * 335.83215 * 9 4 2 12 12 O 1.21284 * 119.99821 * 297.42913 * 11 9 4 13 13 N 1.34772 * 119.99705 * 117.42592 * 11 9 4 14 14 C 1.46504 * 119.99822 * 180.02562 * 13 11 9 15 15 C 1.53041 * 109.46168 * 155.00261 * 14 13 11 16 16 C 1.53186 * 109.31260 * 181.38544 * 15 14 13 17 17 N 1.46928 * 108.77675 * 305.36180 * 16 15 14 18 18 C 1.36940 * 120.63280 * 233.58825 * 17 16 15 19 19 H 1.07999 * 120.00111 * 152.08340 * 18 17 16 20 20 C 1.38814 * 119.99733 * 332.08909 * 18 17 16 21 21 N 1.31619 * 119.99882 * 343.26321 * 20 18 17 22 22 Si 1.86800 * 119.99912 * 163.26799 * 20 18 17 23 23 H 1.48496 * 109.46952 * 179.97438 * 22 20 18 24 24 H 1.48497 * 109.47001 * 299.99858 * 22 20 18 25 25 H 1.48499 * 109.47164 * 59.99544 * 22 20 18 26 26 C 1.46927 * 118.73921 * 53.85918 * 17 16 15 27 27 C 1.53042 * 109.45796 * 275.06855 * 14 13 11 28 28 H 1.09001 * 109.47040 * 299.99849 * 1 2 3 29 29 H 1.09004 * 109.47275 * 59.99501 * 1 2 3 30 30 H 1.08993 * 109.47537 * 180.02562 * 1 2 3 31 31 H 1.09001 * 109.47040 * 240.00151 * 2 1 3 32 32 H 1.09000 * 109.47209 * 299.99956 * 3 2 1 33 33 H 1.09001 * 109.47010 * 60.00132 * 3 2 1 34 34 H 1.08996 * 109.47091 * 180.02562 * 3 2 1 35 35 H 1.08996 * 110.37534 * 200.66280 * 7 6 4 36 36 H 1.09000 * 110.46514 * 78.36721 * 7 6 4 37 37 H 1.08997 * 110.51211 * 265.33104 * 8 7 6 38 38 H 1.09005 * 110.51083 * 142.62492 * 8 7 6 39 39 H 0.96998 * 120.00743 * 0.02562 * 13 11 9 40 40 H 1.09001 * 109.46071 * 35.02482 * 14 13 11 41 41 H 1.08994 * 109.49881 * 61.42885 * 15 14 13 42 42 H 1.08995 * 109.52200 * 301.35048 * 15 14 13 43 43 H 1.09004 * 109.59067 * 185.57657 * 16 15 14 44 44 H 1.09000 * 109.70711 * 65.21723 * 16 15 14 45 45 H 0.97002 * 119.99924 * 180.02562 * 21 20 18 46 46 H 1.09006 * 109.58366 * 65.93011 * 26 17 16 47 47 H 1.08998 * 109.59192 * 186.35288 * 26 17 16 48 48 H 1.09008 * 109.50037 * 298.56540 * 27 14 13 49 49 H 1.09004 * 109.49937 * 58.63028 * 27 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 1.2492 5 1 1.7359 -0.1856 2.1484 6 8 1.5480 -2.0787 1.2821 7 6 2.4436 -2.7867 2.1667 8 6 3.8495 -2.2498 1.8175 9 6 3.5778 -0.8597 1.2001 10 1 4.0529 -0.0787 1.7937 11 6 4.0672 -0.8099 -0.2244 12 8 3.7233 -1.6639 -1.0140 13 7 4.8870 0.1836 -0.6209 14 6 5.3624 0.2324 -2.0058 15 6 5.7176 1.6751 -2.3724 16 6 6.1813 1.7276 -3.8315 17 7 7.2813 0.7706 -4.0128 18 6 8.4749 1.1731 -4.5501 19 1 9.3866 0.6571 -4.2876 20 6 8.5128 2.2444 -5.4321 21 7 7.4055 2.6623 -6.0079 22 14 10.1355 3.0928 -5.8017 23 1 9.9076 4.1977 -6.7673 24 1 10.7042 3.6425 -4.5449 25 1 11.0847 2.1122 -6.3871 26 6 7.0744 -0.6278 -3.6123 27 6 6.6025 -0.6526 -2.1506 28 1 -0.3633 0.5138 0.8900 29 1 -0.3634 0.5139 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 1.8933 -0.5138 -0.8900 32 1 1.6767 1.9564 -0.8900 33 1 1.6767 1.9563 0.8900 34 1 3.1300 1.4425 -0.0005 35 1 2.3905 -3.8595 1.9815 36 1 2.2022 -2.5695 3.2072 37 1 4.3378 -2.9009 1.0925 38 1 4.4569 -2.1558 2.7177 39 1 5.1623 0.8665 0.0107 40 1 4.5787 -0.1291 -2.6716 41 1 6.5185 2.0288 -1.7232 42 1 4.8403 2.3095 -2.2465 43 1 6.5290 2.7331 -4.0686 44 1 5.3540 1.4623 -4.4898 45 1 7.4321 3.4107 -6.6245 46 1 6.3174 -1.0827 -4.2513 47 1 8.0114 -1.1769 -3.7047 48 1 7.3952 -0.2770 -1.5034 49 1 6.3548 -1.6754 -1.8663 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000617950242.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 22:27:32 Heat of formation + Delta-G solvation = -72.716428 kcal Electronic energy + Delta-G solvation = -27590.636807 eV Core-core repulsion = 23938.741138 eV Total energy + Delta-G solvation = -3651.895669 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 310.204 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -40.89601 -38.72347 -37.14061 -35.21591 -34.40268 -32.64045 -31.90053 -30.13496 -29.47388 -28.55147 -27.15408 -25.23408 -23.80676 -22.58316 -22.23083 -21.43231 -20.89077 -19.75146 -19.04675 -17.26888 -16.96134 -16.42832 -16.06163 -15.75534 -15.26813 -14.80245 -14.74116 -13.94596 -13.76993 -13.58873 -13.50970 -13.48054 -13.12393 -12.95609 -12.63822 -12.44189 -12.34037 -12.16567 -12.03766 -11.80059 -11.46843 -11.33263 -11.12388 -11.07235 -10.88943 -10.80465 -10.72487 -10.64997 -10.45201 -10.29394 -10.03591 -9.97020 -9.83095 -9.64919 -9.37513 -8.67096 -8.45622 -6.69366 -5.80375 -3.22842 2.71952 3.30140 3.37843 3.43184 3.44206 3.67400 4.26651 4.44807 4.48566 4.65817 4.79483 4.88027 4.94784 5.07408 5.09790 5.16013 5.32056 5.37113 5.43763 5.48730 5.51448 5.53894 5.55196 5.59686 5.63358 5.76412 5.81865 5.85873 5.87308 6.05374 6.06940 6.22700 6.24599 6.27775 6.35244 6.52220 6.54822 6.58924 6.69687 6.78892 6.91609 6.98489 7.30981 7.59111 7.72035 7.78689 8.41131 8.43839 9.19844 9.82973 10.40056 11.28339 Molecular weight = 310.20amu Principal moments of inertia in cm(-1) A = 0.026759 B = 0.003196 C = 0.003006 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1046.132222 B = 8759.038281 C = 9312.428852 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.139 4.139 2 C -0.108 4.108 3 C -0.153 4.153 4 C 0.102 3.898 5 H 0.075 0.925 6 O -0.358 6.358 7 C 0.048 3.952 8 C -0.140 4.140 9 C -0.144 4.144 10 H 0.096 0.904 11 C 0.525 3.475 12 O -0.531 6.531 13 N -0.723 5.723 14 C 0.151 3.849 15 C -0.146 4.146 16 C 0.174 3.826 17 N -0.592 5.592 18 C -0.254 4.254 19 H 0.065 0.935 20 C 0.002 3.998 21 N -0.903 5.903 22 Si 0.903 3.097 23 H -0.290 1.290 24 H -0.284 1.284 25 H -0.283 1.283 26 C 0.147 3.853 27 C -0.138 4.138 28 H 0.049 0.951 29 H 0.054 0.946 30 H 0.061 0.939 31 H 0.095 0.905 32 H 0.063 0.937 33 H 0.054 0.946 34 H 0.061 0.939 35 H 0.092 0.908 36 H 0.058 0.942 37 H 0.085 0.915 38 H 0.081 0.919 39 H 0.394 0.606 40 H 0.081 0.919 41 H 0.059 0.941 42 H 0.054 0.946 43 H 0.092 0.908 44 H 0.020 0.980 45 H 0.255 0.745 46 H 0.020 0.980 47 H 0.055 0.945 48 H 0.057 0.943 49 H 0.053 0.947 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.341 -4.218 18.653 21.740 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.196 4.196 2 C -0.126 4.126 3 C -0.210 4.210 4 C 0.043 3.957 5 H 0.093 0.907 6 O -0.277 6.277 7 C -0.029 4.029 8 C -0.178 4.178 9 C -0.166 4.166 10 H 0.115 0.885 11 C 0.311 3.689 12 O -0.407 6.407 13 N -0.374 5.374 14 C 0.048 3.952 15 C -0.185 4.185 16 C 0.048 3.952 17 N -0.315 5.315 18 C -0.383 4.383 19 H 0.083 0.917 20 C -0.196 4.196 21 N -0.548 5.548 22 Si 0.733 3.267 23 H -0.216 1.216 24 H -0.211 1.211 25 H -0.209 1.209 26 C 0.020 3.980 27 C -0.179 4.179 28 H 0.069 0.931 29 H 0.073 0.927 30 H 0.080 0.920 31 H 0.113 0.887 32 H 0.082 0.918 33 H 0.073 0.927 34 H 0.080 0.920 35 H 0.111 0.889 36 H 0.076 0.924 37 H 0.104 0.896 38 H 0.100 0.900 39 H 0.228 0.772 40 H 0.099 0.901 41 H 0.077 0.923 42 H 0.072 0.928 43 H 0.110 0.890 44 H 0.039 0.961 45 H 0.065 0.935 46 H 0.038 0.962 47 H 0.074 0.926 48 H 0.076 0.924 49 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -10.780 -4.786 17.802 21.354 hybrid contribution 1.237 0.927 0.299 1.574 sum -9.543 -3.859 18.101 20.823 Atomic orbital electron populations 1.21707 0.94426 1.02246 1.01252 1.21409 0.97017 0.96037 0.98122 1.21953 1.01819 0.95061 1.02181 1.22869 0.89364 0.84825 0.98595 0.90733 1.89181 1.51020 1.20642 1.66828 1.23353 0.87918 0.97983 0.93645 1.22910 0.98721 0.94763 1.01381 1.22814 0.98491 0.99947 0.95309 0.88520 1.20080 0.78123 0.81518 0.89213 1.90721 1.57107 1.38380 1.54485 1.46516 1.49040 1.28233 1.13578 1.21033 0.96195 0.97192 0.80771 1.22521 0.99953 0.93558 1.02516 1.20742 0.89658 0.96679 0.88152 1.44098 1.12917 1.02441 1.72069 1.19159 0.85218 1.14116 1.19824 0.91694 1.25052 0.96880 1.01291 0.96391 1.70012 1.26262 1.28341 1.30164 0.86359 0.83470 0.79224 0.77651 1.21627 1.21060 1.20884 1.20961 0.98224 0.87668 0.91109 1.22441 0.96814 0.98350 1.00258 0.93140 0.92667 0.91965 0.88676 0.91803 0.92714 0.91983 0.88942 0.92361 0.89603 0.90016 0.77235 0.90080 0.92257 0.92769 0.89002 0.96149 0.93540 0.96167 0.92606 0.92405 0.92878 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 19. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.48 9.05 37.16 0.34 -1.15 16 2 C -0.11 -1.27 2.22 -90.62 -0.20 -1.47 16 3 C -0.15 -1.55 8.88 37.16 0.33 -1.22 16 4 C 0.10 1.10 2.68 -25.96 -0.07 1.03 16 5 H 0.07 0.66 8.14 -51.93 -0.42 0.24 16 6 O -0.36 -4.50 10.68 -35.23 -0.38 -4.87 16 7 C 0.05 0.45 7.63 37.94 0.29 0.74 16 8 C -0.14 -1.33 6.62 -25.16 -0.17 -1.50 16 9 C -0.14 -1.49 2.91 -90.20 -0.26 -1.76 16 10 H 0.10 0.74 7.97 -51.93 -0.41 0.33 16 11 C 0.53 7.33 4.20 -10.98 -0.05 7.28 16 12 O -0.53 -9.67 14.89 5.55 0.08 -9.59 16 13 N -0.72 -9.64 3.83 -53.76 -0.21 -9.85 16 14 C 0.15 2.57 2.41 -67.89 -0.16 2.41 16 15 C -0.15 -2.60 5.55 -26.61 -0.15 -2.75 16 16 C 0.17 4.05 5.30 -3.71 -0.02 4.03 16 17 N -0.59 -14.74 2.99 -172.05 -0.51 -15.25 16 18 C -0.25 -6.91 9.59 -15.06 -0.14 -7.05 16 19 H 0.07 1.74 7.88 -52.49 -0.41 1.32 16 20 C 0.00 0.07 4.92 -17.43 -0.09 -0.02 16 21 N -0.90 -25.94 11.16 55.49 0.62 -25.32 16 22 Si 0.90 21.45 29.59 -169.99 -5.03 16.42 16 23 H -0.29 -6.95 7.11 56.52 0.40 -6.54 16 24 H -0.28 -6.65 7.11 56.52 0.40 -6.25 16 25 H -0.28 -6.67 7.11 56.52 0.40 -6.26 16 26 C 0.15 3.18 6.54 -3.48 -0.02 3.15 16 27 C -0.14 -2.51 5.67 -26.39 -0.15 -2.66 16 28 H 0.05 0.46 8.14 -51.93 -0.42 0.04 16 29 H 0.05 0.56 8.14 -51.93 -0.42 0.14 16 30 H 0.06 0.72 7.69 -51.93 -0.40 0.32 16 31 H 0.10 1.46 5.79 -51.93 -0.30 1.16 16 32 H 0.06 0.68 8.14 -51.93 -0.42 0.25 16 33 H 0.05 0.46 8.14 -51.93 -0.42 0.03 16 34 H 0.06 0.63 5.01 -51.93 -0.26 0.37 16 35 H 0.09 0.80 8.14 -51.93 -0.42 0.38 16 36 H 0.06 0.42 8.14 -51.93 -0.42 0.00 16 37 H 0.09 0.99 7.48 -51.93 -0.39 0.60 16 38 H 0.08 0.57 8.14 -51.93 -0.42 0.14 16 39 H 0.39 4.20 8.07 -40.82 -0.33 3.87 16 40 H 0.08 1.58 7.58 -51.93 -0.39 1.18 16 41 H 0.06 1.05 8.14 -51.93 -0.42 0.62 16 42 H 0.05 0.86 8.14 -51.93 -0.42 0.44 16 43 H 0.09 2.38 6.03 -51.93 -0.31 2.06 16 44 H 0.02 0.51 8.14 -51.93 -0.42 0.08 16 45 H 0.25 7.08 8.31 -40.82 -0.34 6.74 16 46 H 0.02 0.45 8.14 -51.93 -0.42 0.03 16 47 H 0.06 1.18 7.93 -51.93 -0.41 0.77 16 48 H 0.06 1.04 8.14 -51.92 -0.42 0.62 16 49 H 0.05 0.95 8.14 -51.93 -0.42 0.53 16 LS Contribution 372.39 15.07 5.61 5.61 Total: -1.00 -31.55 372.39 -9.01 -40.56 By element: Atomic # 1 Polarization: 11.89 SS G_CDS: -8.68 Total: 3.21 kcal Atomic # 6 Polarization: -0.41 SS G_CDS: -0.52 Total: -0.93 kcal Atomic # 7 Polarization: -50.32 SS G_CDS: -0.10 Total: -50.42 kcal Atomic # 8 Polarization: -14.17 SS G_CDS: -0.29 Total: -14.46 kcal Atomic # 14 Polarization: 21.45 SS G_CDS: -5.03 Total: 16.42 kcal Total LS contribution 5.61 Total: 5.61 kcal Total: -31.55 -9.01 -40.56 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000617950242.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.154 kcal (2) G-P(sol) polarization free energy of solvation -31.548 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.702 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.015 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.562 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.716 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds