Wall clock time and date at job start Fri Apr 10 2020 22:29:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.34779 * 120.00212 * 2 1 4 4 O 1.21582 * 120.00318 * 179.97438 * 3 2 1 5 5 N 1.34774 * 119.99640 * 359.97438 * 3 2 1 6 6 C 1.46499 * 120.00002 * 180.02562 * 5 3 2 7 7 C 1.53001 * 109.47403 * 179.97438 * 6 5 3 8 8 C 1.52995 * 109.47101 * 299.99781 * 7 6 5 9 9 C 1.53001 * 109.46852 * 60.00038 * 7 6 5 10 10 C 1.52996 * 109.47313 * 179.97438 * 7 6 5 11 11 C 1.50701 * 109.47430 * 179.97438 * 10 7 6 12 12 H 1.07996 * 119.99682 * 0.02562 * 11 10 7 13 13 C 1.37874 * 120.00138 * 180.02562 * 11 10 7 14 14 N 1.31515 * 120.00389 * 0.02562 * 13 11 10 15 15 Si 1.86799 * 120.00087 * 180.02562 * 13 11 10 16 16 H 1.48507 * 109.46760 * 359.97438 * 15 13 11 17 17 H 1.48498 * 109.47311 * 119.99574 * 15 13 11 18 18 H 1.48497 * 109.47452 * 240.00158 * 15 13 11 19 19 C 1.46502 * 120.00062 * 179.97438 * 2 1 3 20 20 H 1.09002 * 110.67152 * 178.22320 * 19 2 1 21 21 C 1.54890 * 110.75459 * 301.45515 * 19 2 1 22 22 C 1.54265 * 104.19456 * 156.25664 * 21 19 2 23 23 C 1.53874 * 106.60163 * 336.39141 * 22 21 19 24 24 C 1.52995 * 110.03626 * 119.28276 * 23 22 21 25 25 C 1.52992 * 110.03030 * 240.66900 * 23 22 21 26 26 C 1.54273 * 106.59435 * 359.97438 * 23 22 21 27 27 H 1.09002 * 109.47391 * 270.00122 * 1 2 3 28 28 H 1.09001 * 109.46813 * 150.00179 * 1 2 3 29 29 H 1.09004 * 109.47041 * 30.00306 * 1 2 3 30 30 H 0.97001 * 120.00361 * 359.97438 * 5 3 2 31 31 H 1.09002 * 109.47093 * 299.99866 * 6 5 3 32 32 H 1.09006 * 109.47588 * 59.99611 * 6 5 3 33 33 H 1.09002 * 109.46947 * 60.00098 * 8 7 6 34 34 H 1.09002 * 109.47058 * 179.97438 * 8 7 6 35 35 H 1.08994 * 109.47177 * 299.99961 * 8 7 6 36 36 H 1.08995 * 109.47372 * 60.00416 * 9 7 6 37 37 H 1.09002 * 109.47140 * 180.02562 * 9 7 6 38 38 H 1.09002 * 109.47215 * 299.99913 * 9 7 6 39 39 H 1.09002 * 109.47382 * 300.00337 * 10 7 6 40 40 H 1.09006 * 109.47389 * 60.00137 * 10 7 6 41 41 H 0.96999 * 120.00245 * 180.02562 * 14 13 11 42 42 H 1.09005 * 110.49096 * 274.93431 * 21 19 2 43 43 H 1.08998 * 110.49045 * 37.44458 * 21 19 2 44 44 H 1.09001 * 110.03005 * 95.67787 * 22 21 19 45 45 H 1.09001 * 110.03268 * 217.09993 * 22 21 19 46 46 H 1.09000 * 109.46943 * 61.45082 * 24 23 22 47 47 H 1.08991 * 109.47529 * 181.45871 * 24 23 22 48 48 H 1.08999 * 109.46959 * 301.45900 * 24 23 22 49 49 H 1.09003 * 109.48001 * 58.54630 * 25 23 22 50 50 H 1.09007 * 109.46911 * 178.54432 * 25 23 22 51 51 H 1.09002 * 109.47593 * 298.54164 * 25 23 22 52 52 H 1.09001 * 110.48647 * 264.93037 * 26 23 22 53 53 H 1.09004 * 110.47870 * 142.28902 * 26 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3547 1.1672 0.0005 5 7 1.4650 2.3343 -0.0005 6 6 2.1975 3.6031 -0.0011 7 6 1.2033 4.7660 -0.0023 8 6 0.3242 4.6842 -1.2518 9 6 0.3232 4.6858 1.2467 10 6 1.9682 6.0910 -0.0022 11 6 0.9890 7.2365 -0.0040 12 1 -0.0728 7.0392 -0.0046 13 6 1.4486 8.5364 -0.0048 14 7 2.7416 8.7768 -0.0045 15 14 0.2348 9.9563 -0.0063 16 1 -1.1511 9.4226 -0.0070 17 1 0.4447 10.7883 1.2057 18 1 0.4455 10.7865 -1.2193 19 6 2.1975 -1.2687 0.0006 20 1 3.2727 -1.0923 -0.0311 21 6 1.8174 -2.1214 1.2365 22 6 2.1390 -3.5689 0.8108 23 6 2.0954 -3.5949 -0.7271 24 6 3.4601 -4.0057 -1.2833 25 6 1.0195 -4.5723 -1.2043 26 6 1.7480 -2.1624 -1.1823 27 1 -0.3634 0.0000 1.0277 28 1 -0.3633 -0.8900 -0.5138 29 1 -0.3633 0.8900 -0.5139 30 1 0.4950 2.3344 -0.0013 31 1 2.8241 3.6612 0.8889 32 1 2.8243 3.6605 -0.8911 33 1 -0.2208 3.7402 -1.2513 34 1 -0.3844 5.5125 -1.2524 35 1 0.9512 4.7414 -2.1415 36 1 0.9495 4.7442 2.1369 37 1 -0.3854 5.5140 1.2457 38 1 -0.2218 3.7418 1.2472 39 1 2.5943 6.1491 0.8882 40 1 2.5956 6.1485 -0.8918 41 1 3.0649 9.6913 -0.0047 42 1 2.4202 -1.8343 2.0982 43 1 0.7563 -2.0148 1.4619 44 1 3.1325 -3.8490 1.1610 45 1 1.3932 -4.2521 1.2172 46 1 3.7068 -5.0091 -0.9362 47 1 3.4263 -3.9961 -2.3727 48 1 4.2195 -3.3047 -0.9372 49 1 0.0517 -4.2722 -0.8024 50 1 0.9787 -4.5643 -2.2936 51 1 1.2613 -5.5769 -0.8572 52 1 0.6753 -2.0646 -1.3490 53 1 2.3006 -1.9048 -2.0859 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000358731122.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 22:29:27 Heat of formation + Delta-G solvation = -59.772202 kcal Electronic energy + Delta-G solvation = -26942.671251 eV Core-core repulsion = 23427.169981 eV Total energy + Delta-G solvation = -3515.501270 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 310.236 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -40.46275 -39.00161 -37.14467 -35.24450 -33.59817 -32.17655 -31.32029 -28.78469 -27.63515 -27.19503 -26.93165 -26.49666 -26.01565 -24.34186 -22.83964 -21.03529 -19.43345 -19.05317 -18.72211 -17.50400 -16.52989 -16.25208 -15.54123 -15.43876 -14.88148 -14.46526 -14.21006 -13.99503 -13.95827 -13.88321 -13.58146 -13.34879 -13.09309 -13.01217 -12.80031 -12.44143 -12.27181 -12.13485 -12.06300 -11.96841 -11.73706 -11.48655 -11.13103 -11.01577 -10.98736 -10.83721 -10.82580 -10.73942 -10.64355 -10.63132 -10.37737 -10.22024 -9.92137 -9.85860 -9.18553 -8.90009 -8.83620 -8.38839 -8.34984 -5.98803 -3.99976 2.75371 3.30672 3.38738 3.39547 3.40994 4.09799 4.27156 4.36373 4.46327 4.48957 4.87615 4.96617 5.00025 5.06012 5.16377 5.17772 5.26347 5.30827 5.36051 5.36754 5.47280 5.50499 5.53653 5.62211 5.66357 5.67379 5.68760 5.75543 5.77403 5.83996 5.95059 6.03570 6.06630 6.16435 6.19351 6.23991 6.30404 6.43914 6.53614 6.63124 6.64467 6.83781 7.06039 7.08975 7.09209 7.17109 7.66334 7.78639 8.00095 8.15233 8.42015 8.81529 9.05076 9.63037 11.12683 Molecular weight = 310.24amu Principal moments of inertia in cm(-1) A = 0.037170 B = 0.002378 C = 0.002337 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 753.122770 B =11772.323824 C =11976.538611 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.077 3.923 2 N -0.629 5.629 3 C 0.702 3.298 4 O -0.593 6.593 5 N -0.736 5.736 6 C 0.146 3.854 7 C -0.072 4.072 8 C -0.126 4.126 9 C -0.126 4.126 10 C 0.036 3.964 11 C -0.509 4.509 12 H 0.060 0.940 13 C 0.055 3.945 14 N -0.894 5.894 15 Si 0.889 3.111 16 H -0.274 1.274 17 H -0.285 1.285 18 H -0.285 1.285 19 C 0.155 3.845 20 H 0.108 0.892 21 C -0.135 4.135 22 C -0.113 4.113 23 C -0.068 4.068 24 C -0.140 4.140 25 C -0.137 4.137 26 C -0.127 4.127 27 H 0.053 0.947 28 H 0.074 0.926 29 H 0.067 0.933 30 H 0.394 0.606 31 H 0.061 0.939 32 H 0.061 0.939 33 H 0.026 0.974 34 H 0.066 0.934 35 H 0.047 0.953 36 H 0.047 0.953 37 H 0.066 0.934 38 H 0.027 0.973 39 H 0.019 0.981 40 H 0.019 0.981 41 H 0.259 0.741 42 H 0.068 0.932 43 H 0.068 0.932 44 H 0.067 0.933 45 H 0.066 0.934 46 H 0.054 0.946 47 H 0.054 0.946 48 H 0.058 0.942 49 H 0.054 0.946 50 H 0.054 0.946 51 H 0.054 0.946 52 H 0.072 0.928 53 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.959 -26.324 -0.621 26.997 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 N -0.366 5.366 3 C 0.403 3.597 4 O -0.472 6.472 5 N -0.393 5.393 6 C 0.022 3.978 7 C -0.072 4.072 8 C -0.183 4.183 9 C -0.183 4.183 10 C -0.002 4.002 11 C -0.548 4.548 12 H 0.078 0.922 13 C -0.146 4.146 14 N -0.534 5.534 15 Si 0.717 3.283 16 H -0.198 1.198 17 H -0.212 1.212 18 H -0.212 1.212 19 C 0.051 3.949 20 H 0.126 0.874 21 C -0.174 4.174 22 C -0.151 4.151 23 C -0.069 4.069 24 C -0.197 4.197 25 C -0.195 4.195 26 C -0.166 4.166 27 H 0.072 0.928 28 H 0.092 0.908 29 H 0.085 0.915 30 H 0.230 0.770 31 H 0.080 0.920 32 H 0.079 0.921 33 H 0.045 0.955 34 H 0.085 0.915 35 H 0.067 0.933 36 H 0.066 0.934 37 H 0.085 0.915 38 H 0.046 0.954 39 H 0.037 0.963 40 H 0.037 0.963 41 H 0.069 0.931 42 H 0.087 0.913 43 H 0.087 0.913 44 H 0.086 0.914 45 H 0.084 0.916 46 H 0.073 0.927 47 H 0.073 0.927 48 H 0.077 0.923 49 H 0.073 0.927 50 H 0.073 0.927 51 H 0.073 0.927 52 H 0.090 0.910 53 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -4.937 -26.131 -0.622 26.601 hybrid contribution -1.144 0.914 0.007 1.464 sum -6.081 -25.218 -0.615 25.948 Atomic orbital electron populations 1.21682 0.80511 1.02871 1.01600 1.46948 1.05941 1.04802 1.78923 1.15958 0.85382 0.80446 0.77894 1.90892 1.11656 1.86226 1.58404 1.45522 1.09919 1.04956 1.78871 1.21490 0.94350 0.80291 1.01652 1.20906 0.95344 0.95995 0.95001 1.21747 0.99605 0.99558 0.97373 1.21749 0.99601 0.99582 0.97366 1.19097 0.95023 0.88528 0.97549 1.21216 0.92965 0.90513 1.50082 0.92225 1.25021 0.94975 0.98970 0.95616 1.69977 1.12442 1.19966 1.50973 0.86593 0.81469 0.82738 0.77511 1.19826 1.21152 1.21157 1.21901 0.97907 0.81141 0.93976 0.87430 1.22705 1.01760 0.94668 0.98222 1.22229 1.01923 0.96463 0.94485 1.21103 0.95796 0.94777 0.95210 1.21930 0.95957 1.01119 1.00736 1.21905 0.97958 0.98591 1.01025 1.22868 1.01643 0.93583 0.98456 0.92803 0.90772 0.91481 0.76964 0.92048 0.92072 0.95473 0.91464 0.93350 0.93353 0.91479 0.95425 0.96293 0.96296 0.93108 0.91337 0.91322 0.91448 0.91558 0.92714 0.92678 0.92277 0.92665 0.92720 0.92704 0.90971 0.91165 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.66 9.08 59.85 0.54 1.21 16 2 N -0.63 -7.64 2.89 -177.36 -0.51 -8.16 16 3 C 0.70 11.44 8.28 -86.92 -0.72 10.72 16 4 O -0.59 -12.07 15.71 5.29 0.08 -11.98 16 5 N -0.74 -11.38 4.82 -65.22 -0.31 -11.70 16 6 C 0.15 2.68 4.56 -4.04 -0.02 2.66 16 7 C -0.07 -1.38 0.54 -154.51 -0.08 -1.47 16 8 C -0.13 -2.22 8.05 37.15 0.30 -1.92 16 9 C -0.13 -2.23 8.05 37.16 0.30 -1.93 16 10 C 0.04 0.88 4.04 -27.88 -0.11 0.77 16 11 C -0.51 -13.55 7.65 -34.44 -0.26 -13.81 16 12 H 0.06 1.53 5.68 -52.49 -0.30 1.23 16 13 C 0.06 1.54 5.46 -17.82 -0.10 1.44 16 14 N -0.89 -26.51 13.29 55.43 0.74 -25.77 16 15 Si 0.89 21.23 29.54 -169.99 -5.02 16.21 16 16 H -0.27 -6.34 7.11 56.52 0.40 -5.94 16 17 H -0.29 -6.82 7.11 56.52 0.40 -6.41 16 18 H -0.29 -6.82 7.11 56.52 0.40 -6.42 16 19 C 0.16 1.69 3.31 -65.93 -0.22 1.47 16 20 H 0.11 1.45 6.99 -51.93 -0.36 1.09 16 21 C -0.13 -1.19 6.40 -25.07 -0.16 -1.35 16 22 C -0.11 -0.82 6.11 -25.61 -0.16 -0.98 16 23 C -0.07 -0.49 0.94 -153.39 -0.14 -0.64 16 24 C -0.14 -1.01 8.14 37.15 0.30 -0.70 16 25 C -0.14 -0.84 8.15 37.15 0.30 -0.53 16 26 C -0.13 -1.10 5.44 -25.06 -0.14 -1.24 16 27 H 0.05 0.42 8.09 -51.93 -0.42 0.00 16 28 H 0.07 0.50 6.05 -51.93 -0.31 0.19 16 29 H 0.07 0.56 6.36 -51.93 -0.33 0.23 16 30 H 0.39 5.18 3.89 -40.82 -0.16 5.02 16 31 H 0.06 1.21 8.14 -51.93 -0.42 0.79 16 32 H 0.06 1.21 8.14 -51.93 -0.42 0.78 16 33 H 0.03 0.39 6.86 -51.93 -0.36 0.03 16 34 H 0.07 1.27 6.62 -51.93 -0.34 0.93 16 35 H 0.05 0.88 8.14 -51.93 -0.42 0.46 16 36 H 0.05 0.88 8.14 -51.93 -0.42 0.46 16 37 H 0.07 1.27 6.62 -51.93 -0.34 0.93 16 38 H 0.03 0.40 6.86 -51.93 -0.36 0.04 16 39 H 0.02 0.50 8.14 -51.93 -0.42 0.08 16 40 H 0.02 0.50 8.14 -51.93 -0.42 0.08 16 41 H 0.26 7.29 8.31 -40.82 -0.34 6.95 16 42 H 0.07 0.67 8.14 -51.93 -0.42 0.24 16 43 H 0.07 0.56 7.22 -51.93 -0.38 0.19 16 44 H 0.07 0.49 7.67 -51.93 -0.40 0.09 16 45 H 0.07 0.42 7.67 -51.93 -0.40 0.02 16 46 H 0.05 0.35 8.14 -51.93 -0.42 -0.08 16 47 H 0.05 0.38 8.14 -51.93 -0.42 -0.04 16 48 H 0.06 0.47 8.14 -51.93 -0.42 0.05 16 49 H 0.05 0.32 8.14 -51.93 -0.42 -0.10 16 50 H 0.05 0.33 8.14 -51.93 -0.42 -0.09 16 51 H 0.05 0.30 8.14 -51.93 -0.42 -0.12 16 52 H 0.07 0.57 5.77 -51.93 -0.30 0.27 16 53 H 0.07 0.68 7.84 -51.93 -0.41 0.27 16 LS Contribution 396.13 15.07 5.97 5.97 Total: -1.00 -31.30 396.13 -9.22 -40.52 By element: Atomic # 1 Polarization: 11.01 SS G_CDS: -9.79 Total: 1.21 kcal Atomic # 6 Polarization: -5.94 SS G_CDS: -0.36 Total: -6.31 kcal Atomic # 7 Polarization: -45.53 SS G_CDS: -0.09 Total: -45.62 kcal Atomic # 8 Polarization: -12.07 SS G_CDS: 0.08 Total: -11.98 kcal Atomic # 14 Polarization: 21.23 SS G_CDS: -5.02 Total: 16.21 kcal Total LS contribution 5.97 Total: 5.97 kcal Total: -31.30 -9.22 -40.52 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000358731122.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.253 kcal (2) G-P(sol) polarization free energy of solvation -31.303 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.556 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.216 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.520 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.772 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds