Wall clock time and date at job start Fri Apr 10 2020 22:32:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.38361 * 119.92151 * 2 1 4 4 C 1.38449 * 120.29471 * 180.02562 * 3 2 1 5 5 Cl 1.73597 * 119.94267 * 180.02562 * 4 3 2 6 6 C 1.38095 * 120.12397 * 359.97438 * 4 3 2 7 7 C 1.39594 * 119.82737 * 0.02562 * 6 4 3 8 8 C 1.47737 * 120.14205 * 179.97438 * 7 6 4 9 9 O 1.21465 * 120.00029 * 180.02562 * 8 7 6 10 10 O 1.34715 * 119.99490 * 0.02562 * 8 7 6 11 11 C 1.45204 * 116.99528 * 180.02562 * 10 8 7 12 12 C 1.50702 * 109.46748 * 179.97438 * 11 10 8 13 13 O 1.21277 * 120.00375 * 359.97438 * 12 11 10 14 14 N 1.34782 * 119.99435 * 179.97438 * 12 11 10 15 15 C 1.46506 * 119.99494 * 179.97438 * 14 12 11 16 16 C 1.50699 * 109.46922 * 180.02562 * 15 14 12 17 17 H 1.08008 * 119.99905 * 359.97438 * 16 15 14 18 18 C 1.37871 * 120.00090 * 180.02562 * 16 15 14 19 19 N 1.31510 * 120.00177 * 179.97438 * 18 16 15 20 20 Si 1.86805 * 119.99865 * 359.97438 * 18 16 15 21 21 H 1.48503 * 109.46941 * 90.00264 * 20 18 16 22 22 H 1.48500 * 109.47132 * 210.00053 * 20 18 16 23 23 H 1.48494 * 109.46989 * 330.00189 * 20 18 16 24 24 C 1.37933 * 119.91231 * 179.97438 * 2 1 3 25 25 H 1.09003 * 109.46896 * 89.99817 * 1 2 3 26 26 H 1.09001 * 109.47013 * 209.99663 * 1 2 3 27 27 H 1.08995 * 109.46747 * 330.00232 * 1 2 3 28 28 H 1.08005 * 119.85244 * 0.02562 * 3 2 1 29 29 H 1.07994 * 120.08786 * 179.75066 * 6 4 3 30 30 H 1.09001 * 109.46830 * 299.99747 * 11 10 8 31 31 H 1.08995 * 109.47156 * 59.99286 * 11 10 8 32 32 H 0.96990 * 120.00297 * 0.02562 * 14 12 11 33 33 H 1.08997 * 109.47056 * 300.00040 * 15 14 12 34 34 H 1.08993 * 109.46886 * 60.00155 * 15 14 12 35 35 H 0.97004 * 119.99915 * 179.97438 * 19 18 16 36 36 H 1.08000 * 120.06627 * 359.97177 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1972 1.1992 0.0000 4 6 3.5817 1.2082 -0.0005 5 17 4.4383 2.7181 0.0001 6 6 4.2825 0.0183 -0.0005 7 6 3.5914 -1.1946 -0.0005 8 6 4.3341 -2.4716 -0.0011 9 8 3.7302 -3.5255 -0.0016 10 8 5.6813 -2.4672 -0.0011 11 6 6.3446 -3.7589 -0.0023 12 6 7.8380 -3.5566 -0.0027 13 8 8.2980 -2.4344 -0.0026 14 7 8.6624 -4.6229 -0.0033 15 6 10.1142 -4.4262 -0.0043 16 6 10.8027 -5.7667 -0.0054 17 1 10.2173 -6.6744 -0.0049 18 6 12.1797 -5.8345 -0.0059 19 7 12.7805 -7.0043 -0.0063 20 14 13.1921 -4.2645 -0.0060 21 1 13.4609 -3.8488 1.3941 22 1 14.4791 -4.5055 -0.7066 23 1 12.4411 -3.1913 -0.7055 24 6 2.1949 -1.1956 0.0005 25 1 -0.3633 0.0000 -1.0277 26 1 -0.3633 -0.8900 0.5138 27 1 -0.3632 0.8900 0.5138 28 1 1.6535 2.1324 0.0004 29 1 5.3624 0.0260 -0.0050 30 1 6.0535 -4.3176 0.8873 31 1 6.0534 -4.3161 -0.8926 32 1 8.2946 -5.5203 -0.0038 33 1 10.4046 -3.8683 -0.8945 34 1 10.4058 -3.8683 0.8854 35 1 13.7494 -7.0519 -0.0071 36 1 1.6545 -2.1307 0.0014 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000764074371.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 22:32:07 Heat of formation + Delta-G solvation = -109.252016 kcal Electronic energy + Delta-G solvation = -21793.329065 eV Core-core repulsion = 18075.340314 eV Total energy + Delta-G solvation = -3717.988752 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 311.076 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -40.93415 -39.60764 -38.78297 -36.91053 -36.46096 -34.40772 -33.46654 -32.45389 -31.52989 -29.57803 -27.65097 -27.16164 -24.74432 -22.36421 -22.19058 -20.94909 -20.16652 -18.23321 -17.66683 -17.16790 -16.76934 -16.46082 -15.92966 -15.86044 -15.31964 -14.99831 -14.91293 -14.38298 -14.16475 -13.77238 -13.34578 -13.23913 -13.12092 -12.88425 -12.66028 -12.39768 -12.22440 -12.13152 -11.92072 -11.65704 -11.40814 -11.08961 -10.89615 -10.82408 -10.78261 -10.01699 -9.56340 -9.46425 -9.39024 -9.15692 -8.83605 -8.29977 -6.25670 -4.28908 0.17289 0.67561 1.68387 2.13372 2.19394 2.98550 3.18868 3.24370 3.31283 3.39044 3.75935 4.15204 4.29487 4.32783 4.57203 4.63570 4.70392 4.77265 4.97132 5.08336 5.12119 5.12419 5.17499 5.19096 5.21019 5.51321 5.60556 5.77973 5.84825 6.11739 6.16763 6.70743 6.98771 7.05969 7.29570 7.45486 8.02081 8.38701 8.65060 8.77158 9.33295 10.86043 Molecular weight = 311.08amu Principal moments of inertia in cm(-1) A = 0.021673 B = 0.002532 C = 0.002272 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1291.593945 B =11055.669991 C =12321.516237 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.113 4.113 2 C -0.087 4.087 3 C -0.078 4.078 4 C -0.045 4.045 5 Cl -0.058 7.058 6 C -0.056 4.056 7 C -0.105 4.105 8 C 0.511 3.489 9 O -0.502 6.502 10 O -0.324 6.324 11 C 0.050 3.950 12 C 0.502 3.498 13 O -0.536 6.536 14 N -0.699 5.699 15 C 0.222 3.778 16 C -0.546 4.546 17 H 0.081 0.919 18 C 0.078 3.922 19 N -0.890 5.890 20 Si 0.877 3.123 21 H -0.272 1.272 22 H -0.283 1.283 23 H -0.260 1.260 24 C -0.052 4.052 25 H 0.077 0.923 26 H 0.073 0.927 27 H 0.072 0.928 28 H 0.140 0.860 29 H 0.155 0.845 30 H 0.102 0.898 31 H 0.102 0.898 32 H 0.399 0.601 33 H 0.028 0.972 34 H 0.024 0.976 35 H 0.268 0.732 36 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -25.415 15.382 -0.034 29.708 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C -0.088 4.088 3 C -0.097 4.097 4 C -0.071 4.071 5 Cl -0.029 7.029 6 C -0.075 4.075 7 C -0.106 4.106 8 C 0.355 3.645 9 O -0.391 6.391 10 O -0.238 6.238 11 C -0.027 4.027 12 C 0.285 3.715 13 O -0.413 6.413 14 N -0.349 5.349 15 C 0.101 3.899 16 C -0.584 4.584 17 H 0.099 0.901 18 C -0.126 4.126 19 N -0.527 5.527 20 Si 0.703 3.297 21 H -0.198 1.198 22 H -0.208 1.208 23 H -0.185 1.185 24 C -0.070 4.070 25 H 0.095 0.905 26 H 0.092 0.908 27 H 0.091 0.909 28 H 0.158 0.842 29 H 0.173 0.827 30 H 0.120 0.880 31 H 0.120 0.880 32 H 0.233 0.767 33 H 0.046 0.954 34 H 0.042 0.958 35 H 0.078 0.922 36 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -24.924 15.891 -0.035 29.559 hybrid contribution 0.660 0.154 0.018 0.678 sum -24.264 16.045 -0.017 29.089 Atomic orbital electron populations 1.20816 0.89553 1.03562 1.03071 1.19796 0.96915 0.91703 1.00340 1.21226 0.91939 0.99025 0.97490 1.20811 0.92530 0.87739 1.06066 1.98402 1.77086 1.30478 1.96895 1.21525 1.01958 0.89564 0.94439 1.18978 0.93158 0.90392 1.08085 1.21027 0.81174 0.89291 0.73031 1.90848 1.69647 1.32839 1.45778 1.86588 1.19618 1.34191 1.83443 1.22882 0.91597 0.83155 1.05098 1.19891 0.87068 0.86026 0.78498 1.90704 1.77412 1.23521 1.49677 1.46063 1.08565 1.07830 1.72455 1.19561 0.74954 0.98326 0.97096 1.21060 0.92239 0.91420 1.53699 0.90112 1.24788 0.97555 0.96447 0.93784 1.69874 1.09947 1.23791 1.49118 0.86818 0.79958 0.83819 0.79113 1.19783 1.20831 1.18454 1.21270 0.91918 0.99109 0.94727 0.90483 0.90772 0.90932 0.84220 0.82699 0.88042 0.88049 0.76671 0.95398 0.95847 0.92171 0.83688 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.48 10.01 36.01 0.36 -0.12 16 2 C -0.09 -0.61 5.87 -104.69 -0.61 -1.23 16 3 C -0.08 -0.57 9.47 -39.46 -0.37 -0.95 16 4 C -0.04 -0.42 6.31 -39.56 -0.25 -0.67 16 5 Cl -0.06 -0.53 28.95 -51.86 -1.50 -2.04 16 6 C -0.06 -0.60 9.40 -39.13 -0.37 -0.97 16 7 C -0.10 -1.16 5.87 -104.98 -0.62 -1.77 16 8 C 0.51 6.81 7.90 34.61 0.27 7.08 16 9 O -0.50 -7.29 16.14 -19.24 -0.31 -7.60 16 10 O -0.32 -4.83 9.01 -47.21 -0.43 -5.26 16 11 C 0.05 0.71 5.95 36.01 0.21 0.92 16 12 C 0.50 9.36 7.91 -10.98 -0.09 9.27 16 13 O -0.54 -12.10 16.50 -14.10 -0.23 -12.33 16 14 N -0.70 -13.62 5.55 -61.47 -0.34 -13.96 16 15 C 0.22 5.33 4.50 -5.19 -0.02 5.31 16 16 C -0.55 -14.68 9.83 -34.44 -0.34 -15.02 16 17 H 0.08 2.25 7.84 -52.48 -0.41 1.84 16 18 C 0.08 2.19 5.47 -17.82 -0.10 2.09 16 19 N -0.89 -26.11 13.96 55.43 0.77 -25.34 16 20 Si 0.88 21.13 27.47 -169.99 -4.67 16.46 16 21 H -0.27 -6.47 7.11 56.52 0.40 -6.07 16 22 H -0.28 -6.69 7.11 56.52 0.40 -6.29 16 23 H -0.26 -6.22 6.54 56.52 0.37 -5.85 16 24 C -0.05 -0.46 9.24 -39.17 -0.36 -0.82 16 25 H 0.08 0.27 8.14 -51.93 -0.42 -0.15 16 26 H 0.07 0.27 8.08 -51.93 -0.42 -0.15 16 27 H 0.07 0.22 8.08 -51.93 -0.42 -0.20 16 28 H 0.14 0.71 8.06 -52.48 -0.42 0.29 16 29 H 0.16 1.79 7.61 -52.49 -0.40 1.40 16 30 H 0.10 1.24 8.14 -51.93 -0.42 0.81 16 31 H 0.10 1.24 8.14 -51.93 -0.42 0.81 16 32 H 0.40 6.68 8.32 -40.82 -0.34 6.34 16 33 H 0.03 0.71 7.20 -51.93 -0.37 0.33 16 34 H 0.02 0.59 7.57 -51.93 -0.39 0.19 16 35 H 0.27 7.36 8.31 -40.82 -0.34 7.02 16 36 H 0.15 1.17 7.65 -52.49 -0.40 0.77 16 LS Contribution 339.20 15.07 5.11 5.11 Total: -1.00 -32.83 339.20 -7.89 -40.72 By element: Atomic # 1 Polarization: 5.11 SS G_CDS: -4.02 Total: 1.10 kcal Atomic # 6 Polarization: 5.41 SS G_CDS: -2.28 Total: 3.13 kcal Atomic # 7 Polarization: -39.73 SS G_CDS: 0.43 Total: -39.30 kcal Atomic # 8 Polarization: -24.22 SS G_CDS: -0.97 Total: -25.19 kcal Atomic # 14 Polarization: 21.13 SS G_CDS: -4.67 Total: 16.46 kcal Atomic # 17 Polarization: -0.53 SS G_CDS: -1.50 Total: -2.04 kcal Total LS contribution 5.11 Total: 5.11 kcal Total: -32.83 -7.89 -40.72 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000764074371.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.531 kcal (2) G-P(sol) polarization free energy of solvation -32.828 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.359 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.893 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.721 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.252 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds