Wall clock time and date at job start Fri Apr 10 2020 22:32:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37895 * 119.93661 * 2 1 4 4 C 1.39644 * 119.86452 * 179.74472 * 3 2 1 5 5 C 1.47662 * 120.13576 * 180.27451 * 4 3 2 6 6 O 1.21487 * 119.99735 * 186.27843 * 5 4 3 7 7 O 1.34716 * 120.00469 * 6.27393 * 5 4 3 8 8 C 1.45194 * 117.00391 * 180.02562 * 7 5 4 9 9 C 1.50707 * 109.47336 * 180.02562 * 8 7 5 10 10 O 1.21290 * 119.99740 * 359.97438 * 9 8 7 11 11 N 1.34778 * 120.00074 * 180.02562 * 9 8 7 12 12 C 1.37094 * 119.99728 * 179.97438 * 11 9 8 13 13 H 1.08002 * 120.00055 * 359.97438 * 12 11 9 14 14 C 1.38953 * 119.99845 * 179.97438 * 12 11 9 15 15 N 1.31412 * 119.99702 * 359.97438 * 14 12 11 16 16 Si 1.86801 * 119.99876 * 179.97438 * 14 12 11 17 17 H 1.48502 * 109.47027 * 89.99835 * 16 14 12 18 18 H 1.48502 * 109.46800 * 209.99979 * 16 14 12 19 19 H 1.48502 * 109.47163 * 329.99708 * 16 14 12 20 20 C 1.39692 * 119.72830 * 0.52944 * 4 3 2 21 21 C 1.50701 * 120.06684 * 179.72316 * 20 4 3 22 22 C 1.37856 * 119.85995 * 359.44359 * 20 4 3 23 23 C 1.38508 * 119.92727 * 179.97438 * 2 1 3 24 24 Cl 1.73600 * 119.86518 * 0.02562 * 23 2 1 25 25 H 1.09008 * 109.46896 * 270.02525 * 1 2 3 26 26 H 1.08994 * 109.46754 * 30.02327 * 1 2 3 27 27 H 1.08991 * 109.47189 * 150.02706 * 1 2 3 28 28 H 1.08005 * 120.06738 * 359.97438 * 3 2 1 29 29 H 1.09003 * 109.46844 * 299.99872 * 8 7 5 30 30 H 1.08999 * 109.47523 * 60.00456 * 8 7 5 31 31 H 0.96995 * 119.99906 * 359.97438 * 11 9 8 32 32 H 0.97005 * 119.99328 * 179.97438 * 15 14 12 33 33 H 1.08993 * 109.47018 * 276.27364 * 21 20 4 34 34 H 1.08994 * 109.47433 * 36.27658 * 21 20 4 35 35 H 1.08999 * 109.46761 * 156.27676 * 21 20 4 36 36 H 1.07994 * 119.93460 * 180.25329 * 22 20 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1952 1.1950 0.0000 4 6 3.5916 1.1932 0.0054 5 6 4.3345 2.4693 0.0115 6 8 5.5444 2.4683 -0.0988 7 8 3.6708 3.6346 0.1395 8 6 4.4656 4.8497 0.1368 9 6 3.5586 6.0436 0.2892 10 8 2.3602 5.8859 0.3898 11 7 4.0791 7.2867 0.3129 12 6 3.2539 8.3727 0.4510 13 1 2.1868 8.2322 0.5405 14 6 3.7905 9.6542 0.4759 15 7 5.0890 9.8250 0.3675 16 14 2.6661 11.1341 0.6635 17 1 2.4949 11.4461 2.1052 18 1 3.2669 12.3029 -0.0281 19 1 1.3428 10.8297 0.0623 20 6 4.2828 -0.0207 -0.0004 21 6 5.7898 -0.0314 -0.0010 22 6 3.5835 -1.2087 0.0001 23 6 2.1980 -1.2004 0.0005 24 17 1.3246 -2.7007 0.0005 25 1 -0.3633 0.0005 1.0277 26 1 -0.3632 0.8897 -0.5142 27 1 -0.3633 -0.8901 -0.5134 28 1 1.6552 2.1304 -0.0004 29 1 5.1729 4.8230 0.9657 30 1 5.0109 4.9252 -0.8040 31 1 5.0374 7.4128 0.2321 32 1 5.4635 10.7197 0.3845 33 1 6.1536 0.0830 -1.0220 34 1 6.1593 0.7915 0.6107 35 1 6.1465 -0.9767 0.4080 36 1 4.1167 -2.1479 -0.0003 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000795926501.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 22:32:36 Heat of formation + Delta-G solvation = -109.970226 kcal Electronic energy + Delta-G solvation = -22322.815661 eV Core-core repulsion = 18604.795766 eV Total energy + Delta-G solvation = -3718.019895 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 311.076 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -40.78927 -39.36510 -38.11754 -36.86753 -36.20900 -34.04765 -33.94179 -31.64075 -31.36076 -29.57411 -28.34571 -25.50177 -24.76601 -23.98717 -22.10403 -20.40282 -19.59401 -18.09882 -17.81525 -16.66928 -16.44730 -16.36770 -15.95279 -15.60595 -14.74441 -14.67040 -14.39414 -14.03140 -13.97772 -13.35515 -13.22084 -13.16852 -12.90243 -12.57444 -12.54513 -12.30410 -12.11942 -11.93157 -11.73928 -11.63605 -11.44916 -11.14907 -11.04528 -10.46523 -10.45008 -10.32509 -10.12671 -9.62562 -9.18878 -8.83451 -8.55150 -8.10479 -6.51970 -3.94016 0.32787 0.94438 1.72994 2.37482 2.61626 3.11879 3.22342 3.28323 3.37290 3.71503 4.08917 4.34041 4.40026 4.51161 4.73462 4.84740 5.03972 5.11479 5.13081 5.26154 5.41295 5.41430 5.50326 5.56833 5.61238 5.66664 5.77932 5.80001 5.96094 5.99623 6.03038 6.20511 6.39006 6.61669 7.45951 7.77519 7.93094 8.46145 9.05020 9.37054 9.86705 10.65232 Molecular weight = 311.08amu Principal moments of inertia in cm(-1) A = 0.025986 B = 0.002618 C = 0.002385 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1077.265336 B =10690.781545 C =11736.971768 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.097 4.097 3 C -0.042 4.042 4 C -0.117 4.117 5 C 0.504 3.496 6 O -0.503 6.503 7 O -0.320 6.320 8 C 0.062 3.938 9 C 0.438 3.562 10 O -0.576 6.576 11 N -0.552 5.552 12 C -0.302 4.302 13 H 0.106 0.894 14 C 0.025 3.975 15 N -0.897 5.897 16 Si 0.934 3.066 17 H -0.277 1.277 18 H -0.282 1.282 19 H -0.268 1.268 20 C -0.013 4.013 21 C -0.124 4.124 22 C -0.125 4.125 23 C -0.003 4.003 24 Cl -0.063 7.063 25 H 0.078 0.922 26 H 0.077 0.923 27 H 0.073 0.927 28 H 0.155 0.845 29 H 0.088 0.912 30 H 0.088 0.912 31 H 0.395 0.605 32 H 0.274 0.726 33 H 0.081 0.919 34 H 0.098 0.902 35 H 0.063 0.937 36 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.879 -21.931 -1.087 22.039 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C -0.098 4.098 3 C -0.060 4.060 4 C -0.118 4.118 5 C 0.349 3.651 6 O -0.394 6.394 7 O -0.235 6.235 8 C -0.016 4.016 9 C 0.223 3.777 10 O -0.460 6.460 11 N -0.189 5.189 12 C -0.432 4.432 13 H 0.124 0.876 14 C -0.178 4.178 15 N -0.537 5.537 16 Si 0.760 3.240 17 H -0.202 1.202 18 H -0.208 1.208 19 H -0.193 1.193 20 C -0.014 4.014 21 C -0.180 4.180 22 C -0.144 4.144 23 C -0.030 4.030 24 Cl -0.033 7.033 25 H 0.096 0.904 26 H 0.096 0.904 27 H 0.092 0.908 28 H 0.173 0.827 29 H 0.106 0.894 30 H 0.106 0.894 31 H 0.229 0.771 32 H 0.084 0.916 33 H 0.099 0.901 34 H 0.117 0.883 35 H 0.082 0.918 36 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -2.303 -21.942 -1.054 22.088 hybrid contribution 0.259 0.771 0.021 0.813 sum -2.045 -21.171 -1.033 21.294 Atomic orbital electron populations 1.20885 0.89531 1.03826 1.03314 1.19748 0.97352 0.90848 1.01830 1.21505 0.92661 0.98606 0.93228 1.19068 0.93537 0.90387 1.08824 1.21073 0.85947 0.84690 0.73359 1.90780 1.14812 1.87773 1.45989 1.86584 1.40537 1.13974 1.82392 1.22782 0.93491 0.81717 1.03582 1.19296 0.88755 0.83587 0.86068 1.90557 1.15071 1.85229 1.55180 1.41700 1.10298 1.03799 1.63126 1.19723 0.92577 0.83374 1.47479 0.87600 1.25318 0.96387 0.99158 0.96893 1.69616 1.10685 1.24058 1.49378 0.85798 0.79792 0.79851 0.78512 1.20245 1.20799 1.19260 1.19944 0.97209 0.90400 0.93814 1.21153 0.89130 1.03575 1.04122 1.20833 0.91591 0.98522 1.03418 1.21107 0.92347 0.86969 1.02531 1.98369 1.76492 1.31931 1.96552 0.90363 0.90428 0.90805 0.82735 0.89394 0.89378 0.77142 0.91606 0.90093 0.88342 0.91838 0.84065 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.03 9.61 36.01 0.35 -0.68 16 2 C -0.10 -1.04 5.88 -104.65 -0.61 -1.65 16 3 C -0.04 -0.52 9.26 -39.18 -0.36 -0.88 16 4 C -0.12 -1.57 5.87 -104.98 -0.62 -2.18 16 5 C 0.50 8.03 7.83 34.58 0.27 8.30 16 6 O -0.50 -8.30 13.12 -19.26 -0.25 -8.55 16 7 O -0.32 -5.86 9.02 -47.21 -0.43 -6.29 16 8 C 0.06 1.15 5.95 36.01 0.21 1.36 16 9 C 0.44 10.37 7.86 -10.98 -0.09 10.29 16 10 O -0.58 -15.68 16.08 -14.11 -0.23 -15.91 16 11 N -0.55 -13.76 5.29 -10.96 -0.06 -13.82 16 12 C -0.30 -8.25 9.68 -14.93 -0.14 -8.39 16 13 H 0.11 3.01 7.16 -52.49 -0.38 2.64 16 14 C 0.02 0.65 5.50 -17.47 -0.10 0.56 16 15 N -0.90 -23.86 13.05 55.50 0.72 -23.13 16 16 Si 0.93 20.52 29.55 -169.99 -5.02 15.49 16 17 H -0.28 -6.01 7.11 56.52 0.40 -5.60 16 18 H -0.28 -6.08 7.11 56.52 0.40 -5.68 16 19 H -0.27 -5.87 7.11 56.52 0.40 -5.47 16 20 C -0.01 -0.15 5.91 -104.22 -0.62 -0.76 16 21 C -0.12 -1.28 8.75 36.01 0.32 -0.96 16 22 C -0.13 -1.22 9.44 -39.61 -0.37 -1.60 16 23 C 0.00 -0.03 6.32 -39.37 -0.25 -0.28 16 24 Cl -0.06 -0.55 27.27 -51.86 -1.41 -1.96 16 25 H 0.08 0.62 8.14 -51.92 -0.42 0.20 16 26 H 0.08 0.64 8.08 -51.93 -0.42 0.22 16 27 H 0.07 0.58 6.89 -51.93 -0.36 0.22 16 28 H 0.16 1.99 7.63 -52.48 -0.40 1.59 16 29 H 0.09 1.48 8.14 -51.93 -0.42 1.06 16 30 H 0.09 1.48 8.14 -51.93 -0.42 1.06 16 31 H 0.39 9.33 7.90 -40.82 -0.32 9.01 16 32 H 0.27 6.88 8.31 -40.82 -0.34 6.54 16 33 H 0.08 0.82 8.14 -51.93 -0.42 0.40 16 34 H 0.10 1.20 5.82 -51.93 -0.30 0.90 16 35 H 0.06 0.50 8.04 -51.93 -0.42 0.08 16 36 H 0.14 1.06 8.06 -52.49 -0.42 0.64 16 LS Contribution 333.01 15.07 5.02 5.02 Total: -1.00 -30.73 333.01 -7.52 -38.25 By element: Atomic # 1 Polarization: 11.64 SS G_CDS: -3.84 Total: 7.79 kcal Atomic # 6 Polarization: 5.13 SS G_CDS: -2.01 Total: 3.11 kcal Atomic # 7 Polarization: -37.62 SS G_CDS: 0.67 Total: -36.96 kcal Atomic # 8 Polarization: -29.84 SS G_CDS: -0.91 Total: -30.75 kcal Atomic # 14 Polarization: 20.52 SS G_CDS: -5.02 Total: 15.49 kcal Atomic # 17 Polarization: -0.55 SS G_CDS: -1.41 Total: -1.96 kcal Total LS contribution 5.02 Total: 5.02 kcal Total: -30.73 -7.52 -38.25 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000795926501.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.719 kcal (2) G-P(sol) polarization free energy of solvation -30.735 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.454 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.517 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.251 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.970 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds