Wall clock time and date at job start Fri Apr 10 2020 22:34:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.50700 * 109.47315 * 2 1 4 4 N 1.31789 * 119.07678 * 90.00032 * 3 2 1 5 5 C 1.32660 * 120.98645 * 179.97438 * 4 3 2 6 6 Cl 1.73601 * 120.41446 * 180.02562 * 5 4 3 7 7 C 1.38307 * 119.16735 * 359.97438 * 5 4 3 8 8 C 1.50700 * 120.84185 * 179.97438 * 7 5 4 9 9 C 1.39527 * 118.32637 * 359.97438 * 7 5 4 10 10 N 1.38552 * 120.52705 * 180.02562 * 9 7 5 11 11 C 1.48530 * 110.99935 * 62.60557 * 10 9 7 12 12 C 1.54935 * 103.22923 * 159.72024 * 11 10 9 13 13 C 1.54593 * 102.92320 * 322.58605 * 12 11 10 14 14 O 1.42903 * 110.30928 * 263.03942 * 13 12 11 15 15 C 1.50702 * 110.39582 * 140.91312 * 13 12 11 16 16 H 1.07995 * 120.00272 * 239.07021 * 15 13 12 17 17 C 1.37874 * 119.99482 * 59.07458 * 15 13 12 18 18 N 1.31516 * 120.00705 * 4.96325 * 17 15 13 19 19 Si 1.86803 * 119.99559 * 184.96077 * 17 15 13 20 20 H 1.48506 * 109.47205 * 94.99819 * 19 17 15 21 21 H 1.48503 * 109.47190 * 214.99594 * 19 17 15 22 22 H 1.48495 * 109.47367 * 334.99764 * 19 17 15 23 23 C 1.47909 * 110.99921 * 179.97438 * 10 9 7 24 24 N 1.31738 * 119.07917 * 269.72926 * 3 2 1 25 25 H 1.08999 * 109.47643 * 179.97438 * 1 2 3 26 26 H 1.09001 * 109.47295 * 300.00466 * 1 2 3 27 27 H 1.09008 * 109.47211 * 60.00065 * 1 2 3 28 28 H 1.09001 * 109.47036 * 240.00019 * 2 1 3 29 29 H 1.09008 * 109.47211 * 119.99935 * 2 1 3 30 30 H 1.08999 * 109.46950 * 89.99439 * 8 7 5 31 31 H 1.08996 * 109.47671 * 209.99959 * 8 7 5 32 32 H 1.08999 * 109.46811 * 330.00131 * 8 7 5 33 33 H 1.08997 * 110.67038 * 278.15599 * 11 10 9 34 34 H 1.09000 * 110.66839 * 41.28701 * 11 10 9 35 35 H 1.09000 * 110.72752 * 204.22850 * 12 11 10 36 36 H 1.09002 * 110.87605 * 81.01311 * 12 11 10 37 37 H 0.96695 * 114.00388 * 295.71510 * 14 13 12 38 38 H 0.97000 * 119.99960 * 180.02562 * 18 17 15 39 39 H 1.08992 * 109.91786 * 333.50706 * 23 10 9 40 40 H 1.09007 * 109.91182 * 94.80650 * 23 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0323 1.4208 0.0000 4 7 2.2458 2.0246 1.1518 5 6 2.6883 3.2745 1.1960 6 17 2.9651 4.0553 2.7216 7 6 2.9273 3.9472 0.0114 8 6 3.4297 5.3680 0.0176 9 6 2.6916 3.2773 -1.1896 10 7 2.9162 3.9076 -2.4028 11 6 4.3491 4.2656 -2.5594 12 6 4.5042 4.4460 -4.0904 13 6 3.5934 3.3361 -4.6634 14 8 4.3670 2.1809 -4.9936 15 6 2.8571 3.8366 -5.8793 16 1 1.7772 3.8403 -5.8932 17 6 3.5622 4.2897 -6.9741 18 7 4.8737 4.1949 -6.9969 19 14 2.6545 5.0382 -8.4251 20 1 2.6216 6.5157 -8.2795 21 1 3.3547 4.6804 -9.6849 22 1 1.2659 4.5136 -8.4643 23 6 2.5998 3.0084 -3.5338 24 7 2.2509 2.0226 -1.1513 25 1 -0.3634 -1.0276 -0.0005 26 1 -0.3634 0.5139 0.8899 27 1 -0.3634 0.5139 -0.8900 28 1 1.8933 -0.5138 -0.8900 29 1 1.8933 -0.5139 0.8900 30 1 4.5197 5.3679 0.0201 31 1 3.0685 5.8851 -0.8713 32 1 3.0644 5.8786 0.9087 33 1 4.5724 5.1962 -2.0378 34 1 4.9886 3.4592 -2.2004 35 1 5.5394 4.2905 -4.3942 36 1 4.1558 5.4305 -4.4027 37 1 5.0110 2.3274 -5.6998 38 1 5.3697 4.5140 -7.7670 39 1 2.7168 1.9694 -3.2261 40 1 1.5795 3.1851 -3.8744 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000826618358.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 22:34:32 Heat of formation + Delta-G solvation = -2.132455 kcal Electronic energy + Delta-G solvation = -24247.905748 eV Core-core repulsion = 20702.687895 eV Total energy + Delta-G solvation = -3545.217853 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 311.114 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -41.33042 -38.66465 -36.98125 -35.63369 -34.26040 -32.85227 -32.19340 -32.16225 -29.41680 -28.28128 -27.00026 -25.16683 -23.91789 -23.31148 -21.63479 -20.70241 -19.69670 -17.91628 -17.16917 -17.11756 -15.54298 -15.34542 -14.95740 -14.67845 -14.42105 -14.16353 -13.97856 -13.93276 -13.47594 -13.18790 -12.73879 -12.50907 -12.45199 -12.16913 -11.92906 -11.67887 -11.59381 -11.47457 -11.31395 -11.25670 -11.09820 -10.84992 -10.67527 -10.55075 -10.48876 -10.28955 -10.04188 -9.38216 -9.24176 -9.12123 -8.64369 -8.24486 -8.13763 -6.27927 -4.34265 0.85667 1.06049 1.57605 3.19703 3.27831 3.31925 3.54958 3.80353 3.98582 4.26975 4.52735 4.78224 4.88654 5.01031 5.10274 5.20796 5.25075 5.36590 5.54902 5.60460 5.66429 5.79835 5.80594 5.86409 5.93532 6.01368 6.02913 6.07744 6.18911 6.32681 6.57870 6.66006 6.76481 6.88976 7.10641 7.30340 7.38664 7.47260 7.73933 8.05454 8.16688 8.68297 9.31949 9.43810 10.79778 Molecular weight = 311.11amu Principal moments of inertia in cm(-1) A = 0.018765 B = 0.004049 C = 0.003591 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1491.819802 B = 6913.427427 C = 7794.527774 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C -0.053 4.053 3 C 0.354 3.646 4 N -0.540 5.540 5 C 0.230 3.770 6 Cl -0.023 7.023 7 C -0.195 4.195 8 C -0.104 4.104 9 C 0.375 3.625 10 N -0.450 5.450 11 C 0.038 3.962 12 C -0.119 4.119 13 C 0.244 3.756 14 O -0.591 6.591 15 C -0.531 4.531 16 H 0.063 0.937 17 C 0.070 3.930 18 N -0.897 5.897 19 Si 0.900 3.100 20 H -0.279 1.279 21 H -0.285 1.285 22 H -0.272 1.272 23 C 0.053 3.947 24 N -0.539 5.539 25 H 0.067 0.933 26 H 0.056 0.944 27 H 0.060 0.940 28 H 0.094 0.906 29 H 0.089 0.911 30 H 0.075 0.925 31 H 0.087 0.913 32 H 0.071 0.929 33 H 0.083 0.917 34 H 0.047 0.953 35 H 0.075 0.925 36 H 0.074 0.926 37 H 0.383 0.617 38 H 0.267 0.733 39 H 0.079 0.921 40 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.288 -1.205 14.336 14.568 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.092 4.092 3 C 0.086 3.914 4 N -0.259 5.259 5 C 0.059 3.941 6 Cl 0.006 6.994 7 C -0.204 4.204 8 C -0.162 4.162 9 C 0.134 3.866 10 N -0.167 5.167 11 C -0.086 4.086 12 C -0.158 4.158 13 C 0.204 3.796 14 O -0.401 6.401 15 C -0.569 4.569 16 H 0.082 0.918 17 C -0.132 4.132 18 N -0.537 5.537 19 Si 0.728 3.272 20 H -0.205 1.205 21 H -0.211 1.211 22 H -0.197 1.197 23 C -0.072 4.072 24 N -0.259 5.259 25 H 0.086 0.914 26 H 0.075 0.925 27 H 0.079 0.921 28 H 0.112 0.888 29 H 0.108 0.892 30 H 0.093 0.907 31 H 0.105 0.895 32 H 0.090 0.910 33 H 0.102 0.898 34 H 0.066 0.934 35 H 0.094 0.906 36 H 0.093 0.907 37 H 0.234 0.766 38 H 0.077 0.923 39 H 0.098 0.902 40 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -3.095 -1.783 14.745 15.171 hybrid contribution 0.565 1.143 -0.999 1.619 sum -2.530 -0.640 13.746 13.991 Atomic orbital electron populations 1.21679 0.93468 1.02421 1.02504 1.20364 0.96825 0.87719 1.04323 1.22950 0.89921 0.96792 0.81783 1.67564 1.17818 1.09262 1.31219 1.21573 0.94965 0.90418 0.87121 1.98390 1.93876 1.77807 1.29334 1.20771 1.08279 1.00229 0.91134 1.20764 1.01117 0.90250 1.04058 1.20318 0.88509 0.86279 0.91534 1.61577 1.20248 1.35305 0.99587 1.23575 0.83647 1.00168 1.01215 1.23073 1.01626 1.02076 0.88989 1.19345 0.86876 0.82188 0.91222 1.86120 1.55811 1.38242 1.59903 1.21656 0.93617 1.42091 0.99579 0.91846 1.25000 0.94958 0.94776 0.98436 1.69671 1.05819 1.47098 1.31104 0.86440 0.79954 0.79391 0.81426 1.20531 1.21106 1.19713 1.22974 1.00655 0.95533 0.88063 1.68337 1.18647 1.08804 1.30121 0.91432 0.92451 0.92076 0.88768 0.89208 0.90688 0.89472 0.91032 0.89831 0.93412 0.90637 0.90725 0.76578 0.92262 0.90248 0.89698 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.53 9.89 37.15 0.37 -1.16 16 2 C -0.05 -0.65 6.37 -27.89 -0.18 -0.82 16 3 C 0.35 5.62 6.90 -157.25 -1.08 4.53 16 4 N -0.54 -8.53 10.33 -7.94 -0.08 -8.61 16 5 C 0.23 3.47 7.32 -17.17 -0.13 3.34 16 6 Cl -0.02 -0.28 27.63 -51.86 -1.43 -1.71 16 7 C -0.20 -3.03 5.79 -104.12 -0.60 -3.63 16 8 C -0.10 -1.31 7.87 36.01 0.28 -1.03 16 9 C 0.38 6.74 6.20 -154.76 -0.96 5.78 16 10 N -0.45 -8.61 4.72 -169.10 -0.80 -9.40 16 11 C 0.04 0.70 5.59 -1.90 -0.01 0.69 16 12 C -0.12 -2.56 5.32 -24.87 -0.13 -2.70 16 13 C 0.24 5.83 0.99 -90.43 -0.09 5.74 16 14 O -0.59 -14.94 12.93 -35.23 -0.46 -15.39 16 15 C -0.53 -13.79 8.12 -34.44 -0.28 -14.07 16 16 H 0.06 1.66 7.36 -52.49 -0.39 1.28 16 17 C 0.07 1.80 5.22 -17.82 -0.09 1.71 16 18 N -0.90 -22.99 10.89 55.43 0.60 -22.39 16 19 Si 0.90 20.16 29.54 -169.99 -5.02 15.14 16 20 H -0.28 -6.22 7.11 56.52 0.40 -5.82 16 21 H -0.29 -6.37 7.11 56.52 0.40 -5.97 16 22 H -0.27 -6.13 7.11 56.52 0.40 -5.73 16 23 C 0.05 1.16 5.84 -2.77 -0.02 1.15 16 24 N -0.54 -9.72 8.20 -9.98 -0.08 -9.80 16 25 H 0.07 0.57 8.14 -51.93 -0.42 0.15 16 26 H 0.06 0.62 8.14 -51.93 -0.42 0.20 16 27 H 0.06 0.73 8.14 -51.92 -0.42 0.31 16 28 H 0.09 1.13 8.14 -51.93 -0.42 0.70 16 29 H 0.09 0.95 8.14 -51.92 -0.42 0.53 16 30 H 0.07 0.85 7.63 -51.93 -0.40 0.46 16 31 H 0.09 1.15 6.91 -51.93 -0.36 0.79 16 32 H 0.07 0.78 7.02 -51.93 -0.36 0.42 16 33 H 0.08 1.28 5.75 -51.93 -0.30 0.98 16 34 H 0.05 0.88 7.99 -51.93 -0.42 0.47 16 35 H 0.08 1.68 7.99 -51.93 -0.41 1.27 16 36 H 0.07 1.69 7.86 -51.93 -0.41 1.28 16 37 H 0.38 9.77 7.29 45.56 0.33 10.10 16 38 H 0.27 6.59 8.31 -40.82 -0.34 6.25 16 39 H 0.08 1.79 6.34 -51.93 -0.33 1.46 16 40 H 0.08 1.89 7.39 -51.93 -0.38 1.51 16 LS Contribution 335.55 15.07 5.06 5.06 Total: -1.00 -27.16 335.55 -9.80 -36.96 By element: Atomic # 1 Polarization: 15.31 SS G_CDS: -4.67 Total: 10.64 kcal Atomic # 6 Polarization: 2.44 SS G_CDS: -2.92 Total: -0.48 kcal Atomic # 7 Polarization: -49.85 SS G_CDS: -0.36 Total: -50.21 kcal Atomic # 8 Polarization: -14.94 SS G_CDS: -0.46 Total: -15.39 kcal Atomic # 14 Polarization: 20.16 SS G_CDS: -5.02 Total: 15.14 kcal Atomic # 17 Polarization: -0.28 SS G_CDS: -1.43 Total: -1.71 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -27.16 -9.80 -36.96 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000826618358.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.830 kcal (2) G-P(sol) polarization free energy of solvation -27.158 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.672 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.804 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.963 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.132 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds