Wall clock time and date at job start Fri Apr 10 2020 23:04:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 O 1.21301 * 120.00018 * 2 1 4 4 C 1.46848 * 119.99907 * 180.02562 * 2 1 3 5 5 C 1.40047 * 120.08684 * 179.97438 * 4 2 1 6 6 C 1.37792 * 119.91361 * 179.97438 * 5 4 2 7 7 F 1.35092 * 119.95638 * 180.02562 * 6 5 4 8 8 C 1.39324 * 120.08494 * 359.97438 * 6 5 4 9 9 N 1.39527 * 119.91053 * 179.97438 * 8 6 5 10 10 C 1.34781 * 119.99889 * 91.66476 * 9 8 6 11 11 O 1.21280 * 119.99929 * 355.13250 * 10 9 8 12 12 C 1.50695 * 120.00028 * 175.41030 * 10 9 8 13 13 S 1.80993 * 109.47336 * 179.72332 * 12 10 9 14 14 C 1.76195 * 100.00262 * 180.02562 * 13 12 10 15 15 H 1.07999 * 120.00289 * 0.02562 * 14 13 12 16 16 C 1.38804 * 120.00419 * 180.02562 * 14 13 12 17 17 N 1.31633 * 119.99315 * 359.97438 * 16 14 13 18 18 Si 1.86797 * 120.00179 * 179.97438 * 16 14 13 19 19 H 1.48499 * 109.46931 * 90.00170 * 18 16 14 20 20 H 1.48498 * 109.46938 * 209.99930 * 18 16 14 21 21 H 1.48493 * 109.47266 * 329.99876 * 18 16 14 22 22 C 1.39317 * 120.17299 * 0.27322 * 8 6 5 23 23 F 1.35100 * 119.95764 * 179.70459 * 22 8 6 24 24 C 1.37795 * 120.08793 * 359.44866 * 22 8 6 25 25 H 1.09002 * 109.46719 * 239.99891 * 1 2 3 26 26 H 1.09002 * 109.46741 * 359.97438 * 1 2 3 27 27 H 1.09000 * 109.47007 * 119.99474 * 1 2 3 28 28 H 1.07996 * 120.03925 * 359.97438 * 5 4 2 29 29 H 0.96995 * 120.00260 * 271.65514 * 9 8 6 30 30 H 1.08998 * 109.47202 * 299.72607 * 12 10 9 31 31 H 1.08999 * 109.47013 * 59.72480 * 12 10 9 32 32 H 0.97004 * 119.99500 * 179.97438 * 17 16 14 33 33 H 1.07997 * 120.04418 * 180.25295 * 24 22 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1136 1.0505 0.0000 4 6 2.2413 -1.2717 -0.0006 5 6 3.6417 -1.2739 -0.0011 6 6 4.3271 -2.4693 -0.0011 7 9 5.6780 -2.4724 -0.0011 8 6 3.6286 -3.6748 0.0000 9 7 4.3262 -4.8831 -0.0006 10 6 4.6351 -5.4834 1.1660 11 8 4.3856 -4.9315 2.2167 12 6 5.2963 -6.8376 1.1646 13 16 5.5879 -7.3684 2.8702 14 6 6.3466 -8.9317 2.5787 15 1 6.4976 -9.2785 1.5671 16 6 6.7503 -9.7177 3.6492 17 7 6.5667 -9.2948 4.8821 18 14 7.5540 -11.3753 3.3401 19 1 9.0249 -11.2003 3.2349 20 1 7.2440 -12.2932 4.4655 21 1 7.0320 -11.9502 2.0744 22 6 2.2354 -3.6768 -0.0047 23 9 1.5625 -4.8483 -0.0097 24 6 1.5428 -2.4856 0.0011 25 1 -0.3633 -0.5139 0.8900 26 1 -0.3633 1.0277 0.0005 27 1 -0.3633 -0.5138 -0.8900 28 1 4.1838 -0.3398 -0.0015 29 1 4.5887 -5.2912 -0.8404 30 1 4.6481 -7.5579 0.6656 31 1 6.2473 -6.7770 0.6354 32 1 6.8485 -9.8442 5.6303 33 1 0.4629 -2.4880 0.0016 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000272181038.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 23:04:49 Heat of formation + Delta-G solvation = -131.982420 kcal Electronic energy + Delta-G solvation = -22691.039619 eV Core-core repulsion = 18672.565342 eV Total energy + Delta-G solvation = -4018.474277 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 315.053 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -49.28062 -49.24187 -40.51882 -39.67466 -38.04177 -34.90914 -32.47057 -31.90446 -30.84756 -29.93690 -28.43426 -25.55514 -24.35043 -23.26109 -21.07102 -20.55482 -18.55687 -18.04536 -17.82560 -17.51332 -16.70745 -16.22511 -16.14100 -16.00214 -15.55447 -15.34390 -15.12454 -15.01649 -14.89274 -14.83950 -14.20762 -13.50599 -13.09701 -13.03648 -12.88593 -12.74027 -12.61201 -12.50252 -12.15928 -12.02072 -11.09821 -11.06753 -10.81336 -10.37168 -9.89730 -9.83631 -9.59326 -9.30525 -9.23009 -9.10301 -8.31805 -6.56620 -6.25859 -3.97544 -0.14783 0.54398 1.72036 2.70004 2.76515 2.97094 3.19216 3.20357 3.24915 3.28340 3.50435 3.61531 3.87526 4.15635 4.31183 4.46737 4.54844 4.78217 4.84311 4.92872 5.06852 5.09630 5.11682 5.34141 5.40582 5.53007 5.55101 5.62138 5.76743 5.98149 6.03888 6.50545 6.96423 7.25359 7.55807 8.28915 8.31223 9.19485 10.81612 Molecular weight = 315.05amu Principal moments of inertia in cm(-1) A = 0.031353 B = 0.002752 C = 0.002684 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 892.829644 B =10170.597455 C =10431.591617 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C 0.400 3.600 3 O -0.446 6.446 4 C -0.117 4.117 5 C -0.103 4.103 6 C 0.129 3.871 7 F -0.116 7.116 8 C 0.109 3.891 9 N -0.695 5.695 10 C 0.539 3.461 11 O -0.497 6.497 12 C -0.151 4.151 13 S -0.056 6.056 14 C -0.536 4.536 15 H 0.074 0.926 16 C 0.074 3.926 17 N -0.867 5.867 18 Si 0.920 3.080 19 H -0.276 1.276 20 H -0.282 1.282 21 H -0.272 1.272 22 C 0.127 3.873 23 F -0.116 7.116 24 C -0.114 4.114 25 H 0.099 0.901 26 H 0.089 0.911 27 H 0.097 0.903 28 H 0.157 0.843 29 H 0.415 0.585 30 H 0.096 0.904 31 H 0.095 0.905 32 H 0.269 0.731 33 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.933 15.324 -14.851 24.450 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.258 4.258 2 C 0.277 3.723 3 O -0.321 6.321 4 C -0.118 4.118 5 C -0.123 4.123 6 C 0.108 3.892 7 F -0.094 7.094 8 C 0.014 3.986 9 N -0.351 5.351 10 C 0.327 3.673 11 O -0.368 6.368 12 C -0.301 4.301 13 S 0.170 5.830 14 C -0.685 4.685 15 H 0.092 0.908 16 C -0.136 4.136 17 N -0.502 5.502 18 Si 0.747 3.253 19 H -0.202 1.202 20 H -0.207 1.207 21 H -0.197 1.197 22 C 0.106 3.894 23 F -0.095 7.095 24 C -0.134 4.134 25 H 0.117 0.883 26 H 0.108 0.892 27 H 0.116 0.884 28 H 0.175 0.825 29 H 0.253 0.747 30 H 0.114 0.886 31 H 0.114 0.886 32 H 0.079 0.921 33 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -11.972 16.664 -12.865 24.218 hybrid contribution 1.089 -2.311 -1.761 3.103 sum -10.882 14.353 -14.626 23.202 Atomic orbital electron populations 1.22275 0.92767 1.05715 1.05031 1.22331 0.91952 0.86820 0.71158 1.90592 1.72182 1.33893 1.35437 1.20159 0.93199 0.94810 1.03651 1.21363 0.93853 0.97817 0.99270 1.17534 0.77899 0.92695 1.01095 1.91581 1.27415 1.97150 1.93269 1.17674 0.89590 0.86796 1.04555 1.43353 1.59891 1.21211 1.10596 1.20643 0.77297 0.86935 0.82412 1.90741 1.50861 1.64700 1.30499 1.23518 1.02900 0.94442 1.09267 1.85448 1.78755 1.22287 0.96492 1.22849 1.46029 1.03970 0.95605 0.90783 1.25006 0.95450 0.98723 0.94405 1.70017 1.44378 1.37714 0.98114 0.86139 0.79411 0.81705 0.78084 1.20226 1.20717 1.19658 1.17509 0.88419 0.82175 1.01326 1.91586 1.79378 1.45161 1.93332 1.21357 1.01573 0.89566 1.00905 0.88281 0.89227 0.88405 0.82524 0.74681 0.88554 0.88635 0.92106 0.82541 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -0.81 8.92 36.01 0.32 -0.49 16 2 C 0.40 3.17 7.22 -30.83 -0.22 2.95 16 3 O -0.45 -5.03 17.07 5.54 0.09 -4.93 16 4 C -0.12 -1.02 5.87 -105.06 -0.62 -1.64 16 5 C -0.10 -1.07 9.56 -39.07 -0.37 -1.44 16 6 C 0.13 1.60 7.29 -39.34 -0.29 1.31 16 7 F -0.12 -1.61 17.06 2.25 0.04 -1.57 16 8 C 0.11 1.41 5.29 -83.55 -0.44 0.97 16 9 N -0.69 -9.60 4.87 -9.75 -0.05 -9.65 16 10 C 0.54 10.06 7.81 -10.99 -0.09 9.97 16 11 O -0.50 -11.30 15.84 5.56 0.09 -11.21 16 12 C -0.15 -2.97 6.16 36.00 0.22 -2.75 16 13 S -0.06 -1.51 20.57 -107.50 -2.21 -3.72 16 14 C -0.54 -15.08 9.50 30.94 0.29 -14.79 16 15 H 0.07 1.96 7.80 -52.49 -0.41 1.55 16 16 C 0.07 2.08 5.49 -17.43 -0.10 1.99 16 17 N -0.87 -25.97 13.22 55.49 0.73 -25.23 16 18 Si 0.92 21.21 29.55 -169.99 -5.02 16.19 16 19 H -0.28 -6.25 7.11 56.52 0.40 -5.85 16 20 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 21 H -0.27 -6.07 7.11 56.52 0.40 -5.67 16 22 C 0.13 1.44 7.29 -39.34 -0.29 1.15 16 23 F -0.12 -1.46 17.06 2.25 0.04 -1.42 16 24 C -0.11 -0.93 9.43 -39.07 -0.37 -1.30 16 25 H 0.10 0.28 8.08 -51.93 -0.42 -0.14 16 26 H 0.09 0.36 8.12 -51.93 -0.42 -0.07 16 27 H 0.10 0.20 8.08 -51.93 -0.42 -0.22 16 28 H 0.16 1.49 7.64 -52.49 -0.40 1.09 16 29 H 0.41 4.26 8.83 -40.82 -0.36 3.90 16 30 H 0.10 1.73 8.14 -51.92 -0.42 1.31 16 31 H 0.10 1.71 8.14 -51.92 -0.42 1.29 16 32 H 0.27 7.48 8.31 -40.82 -0.34 7.14 16 33 H 0.16 0.72 7.03 -52.49 -0.37 0.36 16 LS Contribution 326.58 15.07 4.92 4.92 Total: -1.00 -35.91 326.58 -6.09 -42.00 By element: Atomic # 1 Polarization: 1.47 SS G_CDS: -2.78 Total: -1.31 kcal Atomic # 6 Polarization: -2.12 SS G_CDS: -1.94 Total: -4.06 kcal Atomic # 7 Polarization: -35.57 SS G_CDS: 0.69 Total: -34.89 kcal Atomic # 8 Polarization: -16.33 SS G_CDS: 0.18 Total: -16.14 kcal Atomic # 9 Polarization: -3.06 SS G_CDS: 0.08 Total: -2.99 kcal Atomic # 14 Polarization: 21.21 SS G_CDS: -5.02 Total: 16.19 kcal Atomic # 16 Polarization: -1.51 SS G_CDS: -2.21 Total: -3.72 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -35.91 -6.09 -42.00 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000272181038.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.980 kcal (2) G-P(sol) polarization free energy of solvation -35.912 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.892 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.090 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.002 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.982 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds