Wall clock time and date at job start Fri Apr 10 2020 23:06:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 N 1.46496 * 109.47234 * 2 1 4 4 C 1.46500 * 119.99999 * 274.91814 * 3 2 1 5 5 C 1.50704 * 109.46869 * 263.61050 * 4 3 2 6 6 H 1.07999 * 119.99903 * 359.97438 * 5 4 3 7 7 C 1.37872 * 119.99731 * 180.02562 * 5 4 3 8 8 N 1.31516 * 120.00554 * 0.02562 * 7 5 4 9 9 Si 1.86803 * 119.99990 * 180.02562 * 7 5 4 10 10 H 1.48500 * 109.46768 * 359.97438 * 9 7 5 11 11 H 1.48496 * 109.47292 * 119.99808 * 9 7 5 12 12 H 1.48500 * 109.47035 * 239.99908 * 9 7 5 13 13 C 1.34783 * 120.00237 * 94.91019 * 3 2 1 14 14 O 1.21573 * 119.99634 * 4.31276 * 13 3 2 15 15 C 1.47673 * 120.00470 * 184.30197 * 13 3 2 16 16 N 1.31815 * 126.45895 * 354.52906 * 15 13 3 17 17 N 1.28475 * 110.13125 * 180.23520 * 16 15 13 18 18 C 1.46491 * 124.93539 * 179.75235 * 17 16 15 19 19 C 1.35614 * 110.12806 * 359.74335 * 17 16 15 20 20 C 1.35439 * 107.13842 * 0.02562 * 19 17 16 21 21 Br 1.89102 * 127.23942 * 179.97438 * 20 19 17 22 22 H 1.08995 * 109.46978 * 179.97438 * 1 2 3 23 23 H 1.09001 * 109.47119 * 300.00022 * 1 2 3 24 24 H 1.09001 * 109.46806 * 60.00204 * 1 2 3 25 25 H 1.08994 * 109.47244 * 239.99608 * 2 1 3 26 26 H 1.09001 * 109.46806 * 119.99796 * 2 1 3 27 27 H 1.08998 * 109.47365 * 23.61280 * 4 3 2 28 28 H 1.09000 * 109.47168 * 143.61514 * 4 3 2 29 29 H 0.96997 * 120.00437 * 180.02562 * 8 7 5 30 30 H 1.09007 * 109.47201 * 269.99473 * 18 17 16 31 31 H 1.09001 * 109.47967 * 29.99194 * 18 17 16 32 32 H 1.09002 * 109.47519 * 149.99566 * 18 17 16 33 33 H 1.08000 * 126.43102 * 180.02562 * 19 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0184 1.3812 0.0000 4 6 2.1600 2.1080 -1.2641 5 6 3.5870 2.0151 -1.7397 6 1 4.3156 1.4696 -1.1584 7 6 3.9626 2.6274 -2.9165 8 7 3.0757 3.2930 -3.6238 9 14 5.7312 2.5117 -3.5066 10 1 6.5248 1.7135 -2.5380 11 1 5.7670 1.8541 -4.8375 12 1 6.3078 3.8760 -3.6129 13 6 2.3373 1.9833 1.1629 14 8 2.2947 1.3563 2.2037 15 6 2.7385 3.4044 1.1730 16 7 2.9252 4.1731 0.1186 17 7 3.2739 5.3532 0.4879 18 6 3.5683 6.4639 -0.4208 19 6 3.3297 5.4213 1.8412 20 6 2.9921 4.1988 2.3166 21 35 2.8879 3.6639 4.1274 22 1 -0.3633 -1.0276 -0.0005 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 0.5138 -0.8900 25 1 1.8934 -0.5139 -0.8899 26 1 1.8933 -0.5138 0.8900 27 1 1.4986 1.6697 -2.0114 28 1 1.8948 3.1544 -1.1132 29 1 3.3399 3.7235 -4.4519 30 1 4.6288 6.4560 -0.6727 31 1 2.9780 6.3553 -1.3307 32 1 3.3172 7.4070 0.0647 33 1 3.5938 6.2877 2.4294 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000292683319.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 23:06:06 Heat of formation + Delta-G solvation = 62.064977 kcal Electronic energy + Delta-G solvation = -19218.990718 eV Core-core repulsion = 16135.839843 eV Total energy + Delta-G solvation = -3083.150876 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 315.032 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -42.15815 -38.66213 -35.10016 -33.27127 -32.60757 -31.52140 -30.23822 -29.05621 -27.11377 -26.68467 -23.37033 -22.94757 -21.09444 -20.83801 -18.53910 -16.88279 -16.34148 -15.98997 -15.72196 -15.25456 -14.36425 -14.12471 -13.57787 -13.48052 -13.01145 -12.74627 -12.63161 -12.33831 -12.17102 -11.86321 -11.59349 -11.49153 -10.92301 -10.86363 -10.72454 -10.42236 -10.12612 -9.98680 -9.70798 -9.50963 -8.93642 -8.79735 -8.37605 -8.33600 -7.56444 -6.03401 -4.04633 2.00089 2.19864 2.30840 3.02786 3.23449 3.32512 3.39083 4.00005 4.15893 4.43529 4.80465 4.95000 5.28976 5.30908 5.35931 5.59402 5.67868 5.75879 5.81744 5.89074 5.97022 6.33063 6.40486 6.56826 6.71857 6.92819 7.00591 7.52190 7.78532 7.90213 8.26675 8.34037 8.46388 8.97286 9.12518 9.57950 11.04258 Molecular weight = 315.03amu Principal moments of inertia in cm(-1) A = 0.014503 B = 0.006599 C = 0.005140 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1930.235352 B = 4241.860641 C = 5446.204213 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C 0.114 3.886 3 N -0.584 5.584 4 C 0.229 3.771 5 C -0.507 4.507 6 H 0.053 0.947 7 C 0.068 3.932 8 N -0.893 5.893 9 Si 0.885 3.115 10 H -0.275 1.275 11 H -0.284 1.284 12 H -0.286 1.286 13 C 0.595 3.405 14 O -0.552 6.552 15 C 0.011 3.989 16 N -0.174 5.174 17 N -0.289 5.289 18 C 0.091 3.909 19 C -0.001 4.001 20 C -0.162 4.162 21 Br -0.007 7.007 22 H 0.057 0.943 23 H 0.052 0.948 24 H 0.056 0.944 25 H 0.075 0.925 26 H 0.076 0.924 27 H 0.030 0.970 28 H 0.069 0.931 29 H 0.259 0.741 30 H 0.083 0.917 31 H 0.104 0.896 32 H 0.089 0.911 33 H 0.181 0.819 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.535 6.515 9.862 11.919 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.221 4.221 2 C -0.009 4.009 3 N -0.315 5.315 4 C 0.109 3.891 5 C -0.546 4.546 6 H 0.072 0.928 7 C -0.133 4.133 8 N -0.533 5.533 9 Si 0.713 3.287 10 H -0.199 1.199 11 H -0.210 1.210 12 H -0.212 1.212 13 C 0.381 3.619 14 O -0.431 6.431 15 C -0.151 4.151 16 N -0.008 5.008 17 N -0.077 5.077 18 C -0.049 4.049 19 C -0.146 4.146 20 C -0.253 4.253 21 Br 0.076 6.924 22 H 0.076 0.924 23 H 0.071 0.929 24 H 0.075 0.925 25 H 0.094 0.906 26 H 0.094 0.906 27 H 0.048 0.952 28 H 0.086 0.914 29 H 0.068 0.932 30 H 0.101 0.899 31 H 0.122 0.878 32 H 0.107 0.893 33 H 0.198 0.802 Dipole moment (debyes) X Y Z Total from point charges -1.625 6.197 9.594 11.536 hybrid contribution 1.251 0.325 -0.225 1.311 sum -0.375 6.522 9.370 11.422 Atomic orbital electron populations 1.22118 0.96787 1.01210 1.02011 1.21279 0.93419 0.83559 1.02686 1.48153 1.61745 1.13381 1.08185 1.19823 0.97060 0.93628 0.78617 1.21387 0.94802 1.32238 1.06166 0.92838 1.24766 0.96795 0.95265 0.96467 1.69944 1.33309 1.34899 1.15100 0.86653 0.85686 0.77668 0.78681 1.19943 1.21030 1.21226 1.16843 0.77420 0.83776 0.83883 1.90726 1.55713 1.64482 1.32131 1.21872 1.08707 0.96287 0.88264 1.74714 1.12285 0.90197 1.23640 1.45942 1.47088 1.09805 1.04840 1.22134 1.03658 0.84896 0.94211 1.22650 1.07487 0.99219 0.85207 1.21814 1.15446 0.95570 0.92475 1.96539 1.97854 1.92069 1.05920 0.92360 0.92869 0.92512 0.90632 0.90577 0.95181 0.91364 0.93163 0.89857 0.87757 0.89268 0.80167 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.68 10.24 37.16 0.38 -2.30 16 2 C 0.11 2.19 6.18 -4.04 -0.02 2.17 16 3 N -0.58 -13.26 2.47 -176.24 -0.44 -13.70 16 4 C 0.23 5.69 4.79 -5.19 -0.02 5.66 16 5 C -0.51 -13.60 8.49 -34.44 -0.29 -13.90 16 6 H 0.05 1.51 7.81 -52.49 -0.41 1.10 16 7 C 0.07 1.82 5.46 -17.82 -0.10 1.73 16 8 N -0.89 -24.34 13.29 55.43 0.74 -23.60 16 9 Si 0.88 20.95 29.54 -169.99 -5.02 15.93 16 10 H -0.27 -6.63 7.11 56.52 0.40 -6.22 16 11 H -0.28 -6.69 7.11 56.52 0.40 -6.29 16 12 H -0.29 -6.63 7.11 56.52 0.40 -6.23 16 13 C 0.59 13.79 7.62 -12.40 -0.09 13.70 16 14 O -0.55 -13.10 15.11 5.30 0.08 -13.02 16 15 C 0.01 0.24 6.81 -82.77 -0.56 -0.32 16 16 N -0.17 -3.74 7.83 33.42 0.26 -3.48 16 17 N -0.29 -4.87 3.71 -67.96 -0.25 -5.12 16 18 C 0.09 1.11 11.32 59.84 0.68 1.79 16 19 C 0.00 -0.01 11.48 -16.88 -0.19 -0.20 16 20 C -0.16 -3.00 6.68 -39.33 -0.26 -3.27 16 21 Br -0.01 -0.12 32.72 -68.01 -2.23 -2.35 16 22 H 0.06 0.79 8.14 -51.93 -0.42 0.37 16 23 H 0.05 0.90 8.14 -51.93 -0.42 0.48 16 24 H 0.06 0.95 8.14 -51.93 -0.42 0.53 16 25 H 0.08 1.42 8.11 -51.93 -0.42 1.00 16 26 H 0.08 1.46 7.23 -51.93 -0.38 1.08 16 27 H 0.03 0.78 8.02 -51.93 -0.42 0.36 16 28 H 0.07 1.77 5.31 -51.93 -0.28 1.50 16 29 H 0.26 6.71 8.31 -40.82 -0.34 6.37 16 30 H 0.08 0.95 8.14 -51.93 -0.42 0.53 16 31 H 0.10 1.40 8.14 -51.93 -0.42 0.97 16 32 H 0.09 0.69 8.13 -51.93 -0.42 0.27 16 33 H 0.18 1.89 8.06 -52.49 -0.42 1.47 16 LS Contribution 306.73 15.07 4.62 4.62 Total: -1.00 -31.65 306.73 -6.72 -38.37 By element: Atomic # 1 Polarization: 1.29 SS G_CDS: -3.99 Total: -2.70 kcal Atomic # 6 Polarization: 5.54 SS G_CDS: -0.50 Total: 5.05 kcal Atomic # 7 Polarization: -46.21 SS G_CDS: 0.31 Total: -45.90 kcal Atomic # 8 Polarization: -13.10 SS G_CDS: 0.08 Total: -13.02 kcal Atomic # 14 Polarization: 20.95 SS G_CDS: -5.02 Total: 15.93 kcal Atomic # 35 Polarization: -0.12 SS G_CDS: -2.23 Total: -2.35 kcal Total LS contribution 4.62 Total: 4.62 kcal Total: -31.65 -6.72 -38.37 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000292683319.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.437 kcal (2) G-P(sol) polarization free energy of solvation -31.649 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 68.788 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.723 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.372 kcal (6) G-S(sol) free energy of system = (1) + (5) 62.065 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds