Wall clock time and date at job start Fri Apr 10 2020 23:07:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.47208 * 179.97438 * 2 1 4 4 N 1.46496 * 109.47234 * 99.66256 * 3 2 1 5 5 C 1.36787 * 120.00333 * 272.69403 * 4 3 2 6 6 H 1.08000 * 120.00443 * 192.72135 * 5 4 3 7 7 C 1.39097 * 119.99974 * 12.71948 * 5 4 3 8 8 N 1.31341 * 119.99878 * 17.73365 * 7 5 4 9 9 Si 1.86799 * 120.00001 * 197.73550 * 7 5 4 10 10 H 1.48504 * 109.46997 * 89.99719 * 9 7 5 11 11 H 1.48494 * 109.46986 * 209.99741 * 9 7 5 12 12 H 1.48501 * 109.47096 * 330.00148 * 9 7 5 13 13 C 1.34782 * 119.99766 * 92.68652 * 4 3 2 14 14 O 1.21654 * 119.99663 * 185.02801 * 13 4 3 15 15 C 1.47301 * 119.99933 * 5.03673 * 13 4 3 16 16 C 1.39029 * 120.69717 * 304.62526 * 15 13 4 17 17 C 1.38747 * 120.47235 * 180.02562 * 16 15 13 18 18 C 1.36242 * 121.89703 * 359.97438 * 17 16 15 19 19 Cl 1.73595 * 119.63564 * 180.27951 * 18 17 16 20 20 C 1.40792 * 120.72539 * 0.02562 * 18 17 16 21 21 N 1.33648 * 121.11927 * 180.02562 * 20 18 17 22 22 C 1.31093 * 121.31525 * 179.97438 * 21 20 18 23 23 C 1.39310 * 121.76193 * 0.02562 * 22 21 20 24 24 C 1.36761 * 119.83385 * 359.97438 * 23 22 21 25 25 C 1.40289 * 118.09773 * 0.02562 * 24 23 22 26 26 H 1.09000 * 109.46857 * 339.66116 * 3 2 1 27 27 H 1.08993 * 109.46807 * 219.66335 * 3 2 1 28 28 H 0.96993 * 120.00230 * 180.02562 * 8 7 5 29 29 H 1.07991 * 119.76166 * 0.02562 * 16 15 13 30 30 H 1.07992 * 119.05056 * 180.02562 * 17 16 15 31 31 H 1.08001 * 119.11977 * 179.97438 * 22 21 20 32 32 H 1.07994 * 120.08042 * 180.02562 * 23 22 21 33 33 H 1.07998 * 120.95064 * 179.97438 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6081 0.0007 0.0000 4 7 3.0963 0.2327 -1.3616 5 6 3.2723 -0.8223 -2.2142 6 1 3.8191 -0.6867 -3.1356 7 6 2.7471 -2.0700 -1.8945 8 7 1.8074 -2.1729 -0.9827 9 14 3.3783 -3.5993 -2.7619 10 1 4.5232 -4.1624 -2.0020 11 1 2.2915 -4.6083 -2.8397 12 1 3.8220 -3.2428 -4.1335 13 6 3.3720 1.4858 -1.7742 14 8 3.6894 1.6893 -2.9308 15 6 3.2891 2.6089 -0.8246 16 6 2.1207 2.8499 -0.1107 17 6 2.0476 3.9094 0.7822 18 6 3.1018 4.7458 0.9946 19 17 2.9482 6.0490 2.1311 20 6 4.3163 4.5617 0.3065 21 7 5.3556 5.3771 0.5092 22 6 6.4882 5.2089 -0.1290 23 6 6.6661 4.1767 -1.0475 24 6 5.6413 3.3072 -1.3007 25 6 4.4321 3.4931 -0.6142 26 1 2.9718 -0.9628 0.3572 27 1 2.9710 0.7919 0.6559 28 1 1.4413 -3.0429 -0.7595 29 1 1.2640 2.2079 -0.2521 30 1 1.1289 4.0753 1.3250 31 1 7.3050 5.8892 0.0618 32 1 7.6111 4.0631 -1.5578 33 1 5.7593 2.5009 -2.0095 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000337800509.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 23:07:32 Heat of formation + Delta-G solvation = 64.429838 kcal Electronic energy + Delta-G solvation = -23141.457744 eV Core-core repulsion = 19580.146022 eV Total energy + Delta-G solvation = -3561.311722 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 315.052 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -40.77424 -39.00589 -37.09600 -36.04664 -35.96974 -34.44751 -33.04306 -32.11078 -30.57886 -29.85415 -27.62744 -25.52597 -24.23349 -23.55793 -22.64415 -19.70636 -18.39905 -18.15737 -17.16907 -17.00337 -16.37983 -16.14800 -15.05576 -14.85705 -14.59738 -14.44918 -14.18054 -13.71716 -13.52960 -13.22496 -13.05443 -12.70334 -12.41903 -12.26082 -12.12461 -11.72651 -11.46556 -11.38158 -11.29833 -11.17730 -10.76923 -10.61918 -10.53150 -10.48278 -10.16683 -9.64913 -9.49386 -8.87291 -8.82969 -8.34821 -7.99469 -6.72860 -4.20513 0.24619 0.81342 1.84294 2.17477 2.75262 2.99634 3.09874 3.14261 3.42006 3.56937 3.89518 3.97882 4.07914 4.17255 4.45205 4.69265 4.72862 4.80245 4.96380 5.02002 5.08221 5.28295 5.35491 5.36840 5.57381 5.79562 5.93581 5.94918 6.12926 6.16806 6.36876 6.40239 6.50365 6.72406 7.23799 7.60574 7.86451 8.03616 8.68256 8.74613 8.92601 9.45351 10.30126 Molecular weight = 315.05amu Principal moments of inertia in cm(-1) A = 0.017989 B = 0.004683 C = 0.003891 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1556.175434 B = 5977.427459 C = 7194.573844 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.472 5.472 2 C 0.254 3.746 3 C 0.216 3.784 4 N -0.422 5.422 5 C -0.309 4.309 6 H 0.116 0.884 7 C 0.033 3.967 8 N -0.872 5.872 9 Si 0.938 3.062 10 H -0.273 1.273 11 H -0.283 1.283 12 H -0.266 1.266 13 C 0.478 3.522 14 O -0.565 6.565 15 C -0.057 4.057 16 C -0.101 4.101 17 C -0.082 4.082 18 C -0.017 4.017 19 Cl -0.055 7.055 20 C 0.134 3.866 21 N -0.469 5.469 22 C 0.131 3.869 23 C -0.180 4.180 24 C -0.034 4.034 25 C -0.068 4.068 26 H 0.129 0.871 27 H 0.085 0.915 28 H 0.279 0.721 29 H 0.140 0.860 30 H 0.141 0.859 31 H 0.160 0.840 32 H 0.139 0.861 33 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.535 8.791 5.890 12.991 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.153 5.153 2 C -0.063 4.063 3 C 0.089 3.911 4 N -0.140 5.140 5 C -0.436 4.436 6 H 0.133 0.867 7 C -0.171 4.171 8 N -0.511 5.511 9 Si 0.763 3.237 10 H -0.198 1.198 11 H -0.208 1.208 12 H -0.191 1.191 13 C 0.268 3.732 14 O -0.449 6.449 15 C -0.062 4.062 16 C -0.120 4.120 17 C -0.103 4.103 18 C -0.045 4.045 19 Cl -0.026 7.026 20 C 0.012 3.988 21 N -0.177 5.177 22 C -0.040 4.040 23 C -0.200 4.200 24 C -0.059 4.059 25 C -0.071 4.071 26 H 0.146 0.854 27 H 0.102 0.898 28 H 0.091 0.909 29 H 0.158 0.842 30 H 0.159 0.841 31 H 0.177 0.823 32 H 0.157 0.843 33 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 5.701 9.465 6.118 12.630 hybrid contribution 0.522 -1.525 -0.849 1.822 sum 6.223 7.940 5.269 11.381 Atomic orbital electron populations 1.80921 1.13265 1.12640 1.08441 1.28851 0.95026 0.89867 0.92557 1.18896 0.82285 1.04295 0.85646 1.43599 1.54525 1.05360 1.10496 1.19875 1.33350 0.85855 1.04535 0.86682 1.25398 0.94499 0.99984 0.97257 1.69625 1.22770 1.26250 1.32440 0.85723 0.78429 0.79712 0.79800 1.19848 1.20810 1.19079 1.17584 0.86461 0.81827 0.87365 1.90694 1.53478 1.83029 1.17748 1.21433 0.93021 0.96132 0.95621 1.21494 0.97960 0.97508 0.95067 1.20629 0.97959 0.93603 0.98088 1.20400 0.93918 0.93689 0.96451 1.98351 1.97725 1.47777 1.58712 1.18303 0.92779 0.92482 0.95282 1.68067 0.99609 1.26003 1.24009 1.22943 0.94549 0.95335 0.91191 1.21965 1.00557 0.96877 1.00581 1.21639 0.90718 0.98081 0.95494 1.19488 0.94588 0.95496 0.97575 0.85372 0.89769 0.90949 0.84242 0.84110 0.82327 0.84285 0.83019 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -10.70 18.51 42.15 0.78 -9.92 16 2 C 0.25 5.39 10.53 -20.76 -0.22 5.17 16 3 C 0.22 4.16 4.76 -6.83 -0.03 4.13 16 4 N -0.42 -9.34 2.58 -119.21 -0.31 -9.64 16 5 C -0.31 -7.44 9.40 -15.02 -0.14 -7.58 16 6 H 0.12 2.89 7.33 -52.49 -0.38 2.51 16 7 C 0.03 0.76 5.04 -17.44 -0.09 0.68 16 8 N -0.87 -20.54 8.66 55.50 0.48 -20.06 16 9 Si 0.94 18.48 29.59 -169.99 -5.03 13.45 16 10 H -0.27 -5.22 7.11 56.52 0.40 -4.82 16 11 H -0.28 -5.68 7.11 56.52 0.40 -5.28 16 12 H -0.27 -5.33 7.11 56.52 0.40 -4.92 16 13 C 0.48 10.42 6.47 -12.57 -0.08 10.34 16 14 O -0.57 -14.00 15.63 5.23 0.08 -13.91 16 15 C -0.06 -1.05 4.84 -102.80 -0.50 -1.55 16 16 C -0.10 -1.66 7.76 -39.10 -0.30 -1.97 16 17 C -0.08 -1.18 9.62 -40.11 -0.39 -1.56 16 18 C -0.02 -0.25 6.32 -39.33 -0.25 -0.50 16 19 Cl -0.05 -0.74 28.46 -51.86 -1.48 -2.21 16 20 C 0.13 2.14 6.60 -84.86 -0.56 1.58 16 21 N -0.47 -6.92 9.79 -10.98 -0.11 -7.03 16 22 C 0.13 1.55 11.14 -17.47 -0.19 1.36 16 23 C -0.18 -2.13 10.04 -39.72 -0.40 -2.53 16 24 C -0.03 -0.51 9.40 -39.35 -0.37 -0.88 16 25 C -0.07 -1.15 5.90 -104.75 -0.62 -1.77 16 26 H 0.13 2.49 6.57 -51.93 -0.34 2.15 16 27 H 0.08 1.35 5.91 -51.93 -0.31 1.04 16 28 H 0.28 6.39 8.31 -40.82 -0.34 6.05 16 29 H 0.14 2.45 5.34 -52.49 -0.28 2.17 16 30 H 0.14 1.66 8.06 -52.49 -0.42 1.24 16 31 H 0.16 1.27 8.06 -52.49 -0.42 0.85 16 32 H 0.14 1.19 8.06 -52.49 -0.42 0.76 16 33 H 0.15 2.46 6.73 -52.49 -0.35 2.10 16 LS Contribution 306.74 15.07 4.62 4.62 Total: -1.00 -28.76 306.74 -7.16 -35.92 By element: Atomic # 1 Polarization: 5.93 SS G_CDS: -2.07 Total: 3.86 kcal Atomic # 6 Polarization: 9.06 SS G_CDS: -4.14 Total: 4.92 kcal Atomic # 7 Polarization: -47.50 SS G_CDS: 0.85 Total: -46.66 kcal Atomic # 8 Polarization: -14.00 SS G_CDS: 0.08 Total: -13.91 kcal Atomic # 14 Polarization: 18.48 SS G_CDS: -5.03 Total: 13.45 kcal Atomic # 17 Polarization: -0.74 SS G_CDS: -1.48 Total: -2.21 kcal Total LS contribution 4.62 Total: 4.62 kcal Total: -28.76 -7.16 -35.92 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000337800509.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.348 kcal (2) G-P(sol) polarization free energy of solvation -28.756 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 71.593 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.163 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.918 kcal (6) G-S(sol) free energy of system = (1) + (5) 64.430 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds