Wall clock time and date at job start Fri Apr 10 2020 23:14:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13595 * 1 3 3 C 1.43206 * 179.97438 * 2 1 4 4 C 1.39382 * 120.08773 * 109.27226 * 3 2 1 5 5 C 1.39309 * 119.70891 * 179.77034 * 4 3 2 6 6 C 1.47781 * 120.05428 * 180.25126 * 5 4 3 7 7 O 1.21589 * 120.00079 * 0.27027 * 6 5 4 8 8 N 1.34776 * 120.00047 * 180.27358 * 6 5 4 9 9 C 1.40533 * 119.99692 * 180.02562 * 8 6 5 10 10 C 1.40655 * 126.08892 * 359.68784 * 9 8 6 11 11 N 1.30906 * 108.39035 * 179.87951 * 10 9 8 12 12 N 1.40069 * 108.40898 * 0.38317 * 11 10 9 13 13 C 1.37321 * 126.06782 * 179.72013 * 12 11 10 14 14 H 1.07993 * 119.99864 * 180.02562 * 13 12 11 15 15 C 1.38986 * 119.99969 * 0.04256 * 13 12 11 16 16 N 1.31301 * 119.99895 * 359.97438 * 15 13 12 17 17 Si 1.86794 * 120.00256 * 180.02562 * 15 13 12 18 18 H 1.48498 * 109.47297 * 59.99323 * 17 15 13 19 19 H 1.48492 * 109.47530 * 179.97438 * 17 15 13 20 20 H 1.48508 * 109.46832 * 300.00036 * 17 15 13 21 21 C 1.35706 * 126.08135 * 180.02562 * 9 8 6 22 22 C 1.39764 * 119.89151 * 0.52286 * 5 4 3 23 23 C 1.37967 * 120.17687 * 359.44952 * 22 5 4 24 24 C 1.38276 * 120.29485 * 0.30134 * 23 22 5 25 25 Cl 1.73595 * 119.94858 * 179.97438 * 24 23 22 26 26 H 1.07992 * 120.14282 * 0.02562 * 4 3 2 27 27 H 0.96997 * 119.99979 * 359.97438 * 8 6 5 28 28 H 1.08000 * 125.80744 * 0.04120 * 10 9 8 29 29 H 0.97002 * 119.99899 * 179.97438 * 16 15 13 30 30 H 1.07994 * 126.24488 * 359.93857 * 21 9 8 31 31 H 1.08002 * 119.91376 * 179.73133 * 22 5 4 32 32 H 1.07999 * 119.85121 * 180.27368 * 23 22 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2666 0.3990 -1.1384 5 6 4.6596 0.4012 -1.1281 6 6 5.4080 0.8274 -2.3291 7 8 4.8079 1.1813 -3.3256 8 7 6.7557 0.8238 -2.3198 9 6 7.4673 1.2297 -3.4617 10 6 6.9066 1.6561 -4.6791 11 7 7.8812 1.9532 -5.5010 12 7 9.0978 1.7209 -4.8469 13 6 10.3501 1.9084 -5.3782 14 1 11.2263 1.6969 -4.7833 15 6 10.4900 2.3709 -6.6813 16 7 9.4247 2.6280 -7.4046 17 14 12.1934 2.6254 -7.4043 18 1 12.9307 1.3364 -7.4000 19 1 12.0704 3.1201 -8.7990 20 1 12.9335 3.6216 -6.5887 21 6 8.8177 1.2738 -3.5881 22 6 5.3483 -0.0058 0.0179 23 6 4.6523 -0.3988 1.1424 24 6 3.2695 -0.3989 1.1423 25 17 2.4028 -0.8957 2.5619 26 1 2.7303 0.7086 -2.0232 27 1 7.2345 0.5418 -1.5247 28 1 5.8515 1.7288 -4.8978 29 1 9.5224 2.9511 -8.3140 30 1 9.5390 1.0049 -2.8307 31 1 6.4283 -0.0084 0.0248 32 1 5.1898 -0.7081 2.0266 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001411695863.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 23:14:26 Heat of formation + Delta-G solvation = 104.119112 kcal Electronic energy + Delta-G solvation = -21578.438598 eV Core-core repulsion = 17953.422021 eV Total energy + Delta-G solvation = -3625.016577 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 316.047 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -40.56992 -39.64278 -38.40696 -36.96499 -36.65866 -34.47051 -33.33531 -31.91598 -31.50612 -30.27290 -27.87139 -25.22175 -24.55574 -23.78321 -21.45519 -20.88808 -19.65883 -19.11406 -17.60122 -17.10298 -16.60192 -16.29284 -15.51287 -15.04635 -15.04294 -14.68293 -14.43290 -14.26219 -13.78603 -13.54412 -13.30603 -13.18445 -13.10036 -13.01640 -12.55243 -12.12985 -11.88463 -11.73432 -11.52873 -11.41019 -11.29095 -11.03939 -10.60474 -10.30732 -9.58892 -9.48463 -9.29250 -9.22038 -8.89214 -8.14360 -6.80599 -6.62191 -4.29866 0.02780 0.51088 1.47042 2.23390 2.30777 2.88653 3.00659 3.03681 3.05485 3.22767 3.41385 3.49048 3.71220 3.80739 4.19689 4.35869 4.46962 4.53149 4.72584 4.76865 4.91795 4.95969 5.30630 5.49188 5.55378 5.72681 6.02598 6.15927 6.35923 6.77989 6.86378 6.98129 7.12000 7.14918 7.77837 8.01112 8.17280 8.49947 8.69219 9.29279 9.58388 10.33473 Molecular weight = 316.05amu Principal moments of inertia in cm(-1) A = 0.040246 B = 0.002341 C = 0.002214 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 695.555021 B =11959.374034 C =12645.078601 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.396 5.396 2 C 0.252 3.748 3 C -0.024 4.024 4 C -0.004 4.004 5 C -0.109 4.109 6 C 0.536 3.464 7 O -0.526 6.526 8 N -0.610 5.610 9 C -0.065 4.065 10 C -0.028 4.028 11 N -0.261 5.261 12 N -0.139 5.139 13 C -0.322 4.322 14 H 0.117 0.883 15 C 0.046 3.954 16 N -0.768 5.768 17 Si 0.935 3.065 18 H -0.266 1.266 19 H -0.276 1.276 20 H -0.266 1.266 21 C -0.083 4.083 22 C -0.051 4.051 23 C -0.113 4.113 24 C 0.017 3.983 25 Cl -0.049 7.049 26 H 0.158 0.842 27 H 0.397 0.603 28 H 0.177 0.823 29 H 0.276 0.724 30 H 0.147 0.853 31 H 0.146 0.854 32 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.547 -6.125 17.242 18.854 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.071 5.071 2 C -0.063 4.063 3 C -0.028 4.028 4 C -0.026 4.026 5 C -0.113 4.113 6 C 0.322 3.678 7 O -0.404 6.404 8 N -0.252 5.252 9 C -0.170 4.170 10 C -0.204 4.204 11 N -0.092 5.092 12 N 0.094 4.906 13 C -0.455 4.455 14 H 0.135 0.865 15 C -0.172 4.172 16 N -0.394 5.394 17 Si 0.759 3.241 18 H -0.191 1.191 19 H -0.201 1.201 20 H -0.191 1.191 21 C -0.234 4.234 22 C -0.071 4.071 23 C -0.131 4.131 24 C -0.013 4.013 25 Cl -0.020 7.020 26 H 0.176 0.824 27 H 0.231 0.769 28 H 0.194 0.806 29 H 0.087 0.913 30 H 0.164 0.836 31 H 0.164 0.836 32 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -6.571 -5.407 15.229 17.445 hybrid contribution 1.228 -0.428 1.205 1.773 sum -5.343 -5.835 16.433 18.239 Atomic orbital electron populations 1.81240 1.11618 1.07633 1.06586 1.25254 0.92238 0.94430 0.94427 1.15674 0.85031 1.07505 0.94623 1.21324 0.92991 0.91825 0.96438 1.20101 0.93696 1.02375 0.95094 1.17776 0.82053 0.80783 0.87155 1.90716 1.68249 1.48014 1.33411 1.42354 1.05024 1.63086 1.14696 1.17210 0.89973 1.20263 0.89598 1.24146 0.99874 1.05414 0.90962 1.78290 0.87305 1.24820 1.18750 1.44573 1.05599 1.34476 1.05978 1.19852 0.80734 1.46499 0.98385 0.86545 1.25658 0.99760 0.95525 0.96209 1.70203 1.28928 1.31476 1.08774 0.85881 0.80332 0.79387 0.78495 1.19113 1.20102 1.19109 1.21254 0.94039 1.16421 0.91679 1.21588 1.00932 0.93511 0.91055 1.20949 0.90970 1.01268 0.99957 1.21145 0.92787 0.99405 0.87931 1.98419 1.76497 1.89188 1.37879 0.82416 0.76903 0.80605 0.91288 0.83572 0.83608 0.83113 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.40 -5.20 18.54 41.84 0.78 -4.43 16 2 C 0.25 2.83 14.36 -22.47 -0.32 2.51 16 3 C -0.02 -0.23 5.73 -106.93 -0.61 -0.84 16 4 C 0.00 -0.04 9.30 -38.76 -0.36 -0.40 16 5 C -0.11 -1.15 5.87 -105.03 -0.62 -1.77 16 6 C 0.54 8.23 7.74 -12.36 -0.10 8.13 16 7 O -0.53 -10.23 13.48 5.29 0.07 -10.16 16 8 N -0.61 -9.44 5.41 -10.87 -0.06 -9.49 16 9 C -0.06 -1.38 6.90 -83.86 -0.58 -1.96 16 10 C -0.03 -0.71 10.85 -17.03 -0.18 -0.90 16 11 N -0.26 -7.30 10.40 30.80 0.32 -6.98 16 12 N -0.14 -3.65 3.74 -11.41 -0.04 -3.69 16 13 C -0.32 -8.17 10.25 -14.82 -0.15 -8.33 16 14 H 0.12 2.60 7.83 -52.49 -0.41 2.19 16 15 C 0.05 1.15 5.50 -17.50 -0.10 1.05 16 16 N -0.77 -20.84 11.81 55.50 0.66 -20.19 16 17 Si 0.94 18.24 29.55 -169.99 -5.02 13.22 16 18 H -0.27 -5.04 7.11 56.52 0.40 -4.64 16 19 H -0.28 -5.36 7.11 56.52 0.40 -4.96 16 20 H -0.27 -5.04 7.11 56.52 0.40 -4.63 16 21 C -0.08 -1.81 11.49 -16.38 -0.19 -2.00 16 22 C -0.05 -0.36 9.53 -39.11 -0.37 -0.74 16 23 C -0.11 -0.70 9.80 -39.67 -0.39 -1.09 16 24 C 0.02 0.14 6.35 -38.96 -0.25 -0.11 16 25 Cl -0.05 -0.40 28.01 -51.86 -1.45 -1.85 16 26 H 0.16 1.69 7.64 -52.49 -0.40 1.29 16 27 H 0.40 4.31 6.84 -40.82 -0.28 4.03 16 28 H 0.18 4.34 5.92 -52.49 -0.31 4.03 16 29 H 0.28 6.89 8.31 -40.82 -0.34 6.55 16 30 H 0.15 2.59 8.06 -52.49 -0.42 2.17 16 31 H 0.15 0.66 6.39 -52.49 -0.34 0.33 16 32 H 0.15 0.54 8.06 -52.49 -0.42 0.11 16 LS Contribution 314.97 15.07 4.75 4.75 Total: -1.00 -32.85 314.97 -5.94 -38.79 By element: Atomic # 1 Polarization: 8.18 SS G_CDS: -1.72 Total: 6.47 kcal Atomic # 6 Polarization: -2.21 SS G_CDS: -4.22 Total: -6.43 kcal Atomic # 7 Polarization: -46.44 SS G_CDS: 1.65 Total: -44.79 kcal Atomic # 8 Polarization: -10.23 SS G_CDS: 0.07 Total: -10.16 kcal Atomic # 14 Polarization: 18.24 SS G_CDS: -5.02 Total: 13.22 kcal Atomic # 17 Polarization: -0.40 SS G_CDS: -1.45 Total: -1.85 kcal Total LS contribution 4.75 Total: 4.75 kcal Total: -32.85 -5.94 -38.79 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001411695863.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 142.913 kcal (2) G-P(sol) polarization free energy of solvation -32.852 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 110.061 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.942 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.794 kcal (6) G-S(sol) free energy of system = (1) + (5) 104.119 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds