Wall clock time and date at job start Fri Apr 10 2020 23:14:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.38260 * 119.44625 * 2 1 4 4 C 1.38555 * 119.28797 * 179.97438 * 3 2 1 5 5 Cl 1.73603 * 120.87348 * 180.02562 * 4 3 2 6 6 C 1.40206 * 118.25011 * 359.72698 * 4 3 2 7 7 C 1.47741 * 120.57141 * 180.28374 * 6 4 3 8 8 O 1.21574 * 120.00178 * 0.25355 * 7 6 4 9 9 N 1.34779 * 119.99603 * 180.24450 * 7 6 4 10 10 C 1.39861 * 119.99931 * 174.88906 * 9 7 6 11 11 C 1.39315 * 119.94675 * 325.55116 * 10 9 7 12 12 C 1.38488 * 120.42206 * 179.71877 * 11 10 9 13 13 C 1.37682 * 120.32689 * 0.55237 * 12 11 10 14 14 C 1.40748 * 119.88752 * 359.72511 * 13 12 11 15 15 C 1.41412 * 120.21015 * 180.02562 * 14 13 12 16 16 H 1.08000 * 119.99848 * 25.13338 * 15 14 13 17 17 C 1.39925 * 120.00146 * 205.12974 * 15 14 13 18 18 N 1.30838 * 119.99944 * 16.80270 * 17 15 14 19 19 Si 1.86794 * 120.00198 * 196.79835 * 17 15 14 20 20 H 1.48500 * 109.47052 * 0.02562 * 19 17 15 21 21 H 1.48509 * 109.47241 * 120.00178 * 19 17 15 22 22 H 1.48505 * 109.47520 * 239.99923 * 19 17 15 23 23 C 1.38252 * 119.95185 * 145.82123 * 10 9 7 24 24 C 1.39527 * 118.85029 * 0.53025 * 6 4 3 25 25 N 1.31677 * 120.57755 * 359.45975 * 24 6 4 26 26 H 1.08997 * 109.47348 * 270.02636 * 1 2 3 27 27 H 1.09002 * 109.46834 * 30.02554 * 1 2 3 28 28 H 1.08998 * 109.47173 * 150.02457 * 1 2 3 29 29 H 1.07994 * 120.35678 * 359.95188 * 3 2 1 30 30 H 0.96997 * 120.00242 * 354.90051 * 9 7 6 31 31 H 1.07994 * 119.78678 * 359.97438 * 11 10 9 32 32 H 1.07996 * 119.83436 * 180.25733 * 12 11 10 33 33 H 1.07997 * 120.05986 * 179.74267 * 13 12 11 34 34 H 0.96998 * 119.99701 * 179.97438 * 18 17 15 35 35 H 1.08007 * 120.16111 * 359.97438 * 23 10 9 36 36 H 1.08004 * 119.70864 * 179.73245 * 24 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1866 1.2040 0.0000 4 6 3.5722 1.2002 0.0005 5 17 4.4671 2.6877 0.0012 6 6 4.2324 -0.0367 0.0070 7 6 5.7084 -0.1006 0.0141 8 8 6.3612 0.9250 0.0192 9 7 6.3311 -1.2959 0.0153 10 6 7.7246 -1.3585 -0.0859 11 6 8.4085 -0.4230 -0.8591 12 6 9.7887 -0.4723 -0.9615 13 6 10.4996 -1.4542 -0.3086 14 6 9.8218 -2.4096 0.4716 15 6 10.5452 -3.4207 1.1454 16 1 11.5790 -3.2583 1.4124 17 6 9.9217 -4.6315 1.4663 18 7 8.8042 -4.9687 0.8752 19 14 10.6846 -5.7666 2.7386 20 1 11.9371 -5.1594 3.2560 21 1 9.7313 -5.9653 3.8599 22 1 10.9915 -7.0775 2.1119 23 6 8.4209 -2.3520 0.5771 24 6 3.4713 -1.2061 0.0012 25 7 2.1558 -1.1492 0.0006 26 1 -0.3634 0.0005 1.0276 27 1 -0.3633 0.8898 -0.5142 28 1 -0.3633 -0.8902 -0.5134 29 1 1.6434 2.1374 -0.0008 30 1 5.8128 -2.1127 0.0861 31 1 7.8592 0.3480 -1.3787 32 1 10.3096 0.2602 -1.5602 33 1 11.5755 -1.4910 -0.3948 34 1 8.3722 -5.8082 1.0974 35 1 7.8913 -3.0802 1.1737 36 1 3.9656 -2.1664 0.0016 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000313445163.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 23:14:55 Heat of formation + Delta-G solvation = 18.800758 kcal Electronic energy + Delta-G solvation = -22592.784239 eV Core-core repulsion = 19067.608324 eV Total energy + Delta-G solvation = -3525.175915 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 316.072 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -40.85544 -39.30501 -37.22188 -36.70299 -34.39006 -33.57596 -33.01498 -32.37635 -29.61239 -29.13764 -27.61722 -25.26679 -24.16069 -23.25313 -21.45410 -21.11259 -19.79199 -18.04491 -17.61857 -16.95515 -16.31929 -15.66488 -15.23814 -15.04625 -14.81284 -14.69631 -14.26653 -14.01797 -13.70382 -13.20809 -12.87843 -12.82280 -12.66883 -12.55448 -12.36410 -12.09471 -11.66374 -11.35721 -11.23618 -11.12640 -10.75553 -10.60621 -10.12099 -9.94196 -9.76047 -9.65280 -9.42306 -9.32553 -9.19311 -8.95088 -7.40221 -7.05097 -6.72011 -4.38886 0.33715 0.74250 1.85214 2.57348 2.82153 3.06739 3.08794 3.12365 3.22313 3.43749 3.69413 3.85546 3.92447 4.27249 4.52519 4.61752 4.67427 4.94867 4.97106 5.21516 5.23893 5.41331 5.55362 5.64960 5.66399 6.14003 6.25378 6.60914 6.63701 6.84271 7.01538 7.03932 7.22706 7.52942 7.56733 7.63359 7.90110 8.00643 8.09673 8.27720 8.48851 8.67596 8.86941 8.92806 10.17059 Molecular weight = 316.07amu Principal moments of inertia in cm(-1) A = 0.017224 B = 0.003464 C = 0.002992 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1625.226490 B = 8080.137914 C = 9356.633140 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.106 4.106 2 C 0.156 3.844 3 C -0.176 4.176 4 C 0.057 3.943 5 Cl -0.012 7.012 6 C -0.182 4.182 7 C 0.549 3.451 8 O -0.497 6.497 9 N -0.656 5.656 10 C 0.145 3.855 11 C -0.224 4.224 12 C -0.086 4.086 13 C -0.226 4.226 14 C 0.120 3.880 15 C -0.462 4.462 16 H 0.079 0.921 17 C 0.077 3.923 18 N -0.799 5.799 19 Si 0.907 3.093 20 H -0.261 1.261 21 H -0.273 1.273 22 H -0.275 1.275 23 C -0.179 4.179 24 C 0.154 3.846 25 N -0.484 5.484 26 H 0.084 0.916 27 H 0.079 0.921 28 H 0.083 0.917 29 H 0.150 0.850 30 H 0.400 0.600 31 H 0.102 0.898 32 H 0.092 0.908 33 H 0.094 0.906 34 H 0.279 0.721 35 H 0.123 0.877 36 H 0.170 0.830 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -16.003 6.727 -0.929 17.384 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C 0.019 3.981 3 C -0.197 4.197 4 C 0.021 3.979 5 Cl 0.018 6.982 6 C -0.188 4.188 7 C 0.334 3.666 8 O -0.372 6.372 9 N -0.300 5.300 10 C 0.053 3.947 11 C -0.245 4.245 12 C -0.104 4.104 13 C -0.246 4.246 14 C 0.117 3.883 15 C -0.492 4.492 16 H 0.097 0.903 17 C -0.140 4.140 18 N -0.425 5.425 19 Si 0.731 3.269 20 H -0.184 1.184 21 H -0.198 1.198 22 H -0.200 1.200 23 C -0.201 4.201 24 C -0.005 4.005 25 N -0.194 5.194 26 H 0.103 0.897 27 H 0.098 0.902 28 H 0.102 0.898 29 H 0.168 0.832 30 H 0.236 0.764 31 H 0.120 0.880 32 H 0.110 0.890 33 H 0.112 0.888 34 H 0.089 0.911 35 H 0.141 0.859 36 H 0.187 0.813 Dipole moment (debyes) X Y Z Total from point charges -16.120 6.657 -0.956 17.467 hybrid contribution 0.607 -0.183 0.571 0.854 sum -15.513 6.473 -0.384 16.814 Atomic orbital electron populations 1.20792 0.87805 1.04062 1.03669 1.21507 0.97529 0.87457 0.91580 1.21901 0.92067 1.00647 1.05094 1.21434 0.92277 0.88795 0.95372 1.98448 1.74684 1.29584 1.95509 1.21034 0.96014 0.93635 1.08116 1.17816 0.85893 0.84549 0.78355 1.90873 1.65951 1.33145 1.47248 1.43345 1.07217 1.07677 1.71746 1.17551 0.79759 0.98501 0.98851 1.20292 0.94028 1.03039 1.07176 1.20415 0.93427 0.97467 0.99131 1.21056 0.98108 1.00739 1.04718 1.17365 0.91141 0.90949 0.88857 1.19568 0.98806 0.97967 1.32852 0.90308 1.25872 0.94482 0.98544 0.95130 1.69817 1.16376 1.21830 1.34492 0.86285 0.80292 0.79544 0.80740 1.18432 1.19784 1.20032 1.21072 0.94842 1.00290 1.03848 1.23088 0.89023 0.97430 0.90934 1.67548 1.09506 1.28914 1.13444 0.89715 0.90217 0.89816 0.83210 0.76439 0.88040 0.88995 0.88819 0.91068 0.85919 0.81275 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.67 10.16 36.00 0.37 -0.30 16 2 C 0.16 1.59 6.78 -82.53 -0.56 1.03 16 3 C -0.18 -1.82 9.54 -39.46 -0.38 -2.19 16 4 C 0.06 0.76 6.40 -38.73 -0.25 0.52 16 5 Cl -0.01 -0.17 26.25 -51.86 -1.36 -1.53 16 6 C -0.18 -2.66 5.89 -104.79 -0.62 -3.28 16 7 C 0.55 10.00 7.50 -12.38 -0.09 9.91 16 8 O -0.50 -10.49 11.89 5.30 0.06 -10.42 16 9 N -0.66 -12.29 5.28 -10.79 -0.06 -12.35 16 10 C 0.14 3.34 6.25 -83.79 -0.52 2.82 16 11 C -0.22 -5.28 8.66 -39.09 -0.34 -5.62 16 12 C -0.09 -1.99 10.02 -39.69 -0.40 -2.39 16 13 C -0.23 -5.59 9.79 -38.84 -0.38 -5.97 16 14 C 0.12 3.16 5.57 -106.85 -0.59 2.56 16 15 C -0.46 -12.06 9.05 -37.74 -0.34 -12.40 16 16 H 0.08 1.99 7.90 -52.49 -0.41 1.58 16 17 C 0.08 1.87 5.16 -17.34 -0.09 1.78 16 18 N -0.80 -19.78 10.94 55.55 0.61 -19.17 16 19 Si 0.91 18.34 29.59 -169.99 -5.03 13.31 16 20 H -0.26 -5.27 7.11 56.52 0.40 -4.86 16 21 H -0.27 -5.43 7.11 56.52 0.40 -5.03 16 22 H -0.27 -5.47 7.11 56.52 0.40 -5.07 16 23 C -0.18 -4.50 8.60 -38.68 -0.33 -4.83 16 24 C 0.15 1.95 10.71 -17.14 -0.18 1.76 16 25 N -0.48 -5.87 10.25 -9.15 -0.09 -5.96 16 26 H 0.08 0.45 8.14 -51.93 -0.42 0.03 16 27 H 0.08 0.34 8.07 -51.93 -0.42 -0.08 16 28 H 0.08 0.53 8.14 -51.93 -0.42 0.10 16 29 H 0.15 1.10 8.06 -52.49 -0.42 0.68 16 30 H 0.40 6.27 6.90 -40.82 -0.28 5.98 16 31 H 0.10 2.36 6.47 -52.49 -0.34 2.02 16 32 H 0.09 1.88 8.06 -52.49 -0.42 1.46 16 33 H 0.09 2.17 8.06 -52.49 -0.42 1.74 16 34 H 0.28 6.25 8.30 -40.82 -0.34 5.91 16 35 H 0.12 3.11 6.17 -52.48 -0.32 2.78 16 36 H 0.17 1.80 6.44 -52.48 -0.34 1.46 16 LS Contribution 326.31 15.07 4.92 4.92 Total: -1.00 -30.07 326.31 -9.03 -39.10 By element: Atomic # 1 Polarization: 12.08 SS G_CDS: -3.36 Total: 8.71 kcal Atomic # 6 Polarization: -11.89 SS G_CDS: -4.71 Total: -16.60 kcal Atomic # 7 Polarization: -37.94 SS G_CDS: 0.46 Total: -37.49 kcal Atomic # 8 Polarization: -10.49 SS G_CDS: 0.06 Total: -10.42 kcal Atomic # 14 Polarization: 18.34 SS G_CDS: -5.03 Total: 13.31 kcal Atomic # 17 Polarization: -0.17 SS G_CDS: -1.36 Total: -1.53 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -30.07 -9.03 -39.10 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000313445163.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.904 kcal (2) G-P(sol) polarization free energy of solvation -30.073 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.830 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.030 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.103 kcal (6) G-S(sol) free energy of system = (1) + (5) 18.801 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds