Wall clock time and date at job start Fri Apr 10 2020 23:15:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.38385 * 120.44177 * 2 1 4 4 C 1.38896 * 118.48681 * 180.27628 * 3 2 1 5 5 Cl 1.73595 * 120.36023 * 179.70651 * 4 3 2 6 6 C 1.38230 * 119.28473 * 359.73248 * 4 3 2 7 7 N 1.31903 * 120.82913 * 359.97438 * 6 4 3 8 8 C 1.32381 * 121.65026 * 359.97438 * 7 6 4 9 9 N 1.39370 * 119.68605 * 180.02562 * 8 7 6 10 10 C 1.34780 * 119.99660 * 0.02562 * 9 8 7 11 11 O 1.21547 * 120.00301 * 359.97438 * 10 9 8 12 12 C 1.47849 * 119.99812 * 179.72322 * 10 9 8 13 13 C 1.39942 * 120.02473 * 0.02562 * 12 10 9 14 14 C 1.38324 * 120.35383 * 179.69355 * 13 12 10 15 15 C 1.37756 * 120.41048 * 0.60581 * 14 13 12 16 16 C 1.40750 * 120.04997 * 359.67246 * 15 14 13 17 17 C 1.41439 * 120.17987 * 180.02562 * 16 15 14 18 18 H 1.07996 * 120.00325 * 334.92793 * 17 16 15 19 19 C 1.39937 * 119.99828 * 154.93340 * 17 16 15 20 20 N 1.30830 * 119.99945 * 342.58029 * 19 17 16 21 21 Si 1.86796 * 120.00011 * 162.58276 * 19 17 16 22 22 H 1.48496 * 109.47174 * 359.97438 * 21 19 17 23 23 H 1.48501 * 109.47467 * 119.99632 * 21 19 17 24 24 H 1.48500 * 109.47368 * 239.99744 * 21 19 17 25 25 C 1.39011 * 120.02721 * 180.27131 * 12 10 9 26 26 H 1.08996 * 109.47748 * 270.25393 * 1 2 3 27 27 H 1.08999 * 109.47043 * 30.25649 * 1 2 3 28 28 H 1.09003 * 109.47217 * 150.25278 * 1 2 3 29 29 H 1.07996 * 120.76193 * 0.02562 * 3 2 1 30 30 H 1.08004 * 119.58477 * 180.02562 * 6 4 3 31 31 H 0.96999 * 120.00227 * 180.02562 * 9 8 7 32 32 H 1.07995 * 119.82250 * 0.02562 * 13 12 10 33 33 H 1.07994 * 119.79376 * 180.28226 * 14 13 12 34 34 H 1.08003 * 119.97559 * 179.69894 * 15 14 13 35 35 H 0.97005 * 119.99572 * 180.02562 * 20 19 17 36 36 H 1.08002 * 120.20553 * 359.97438 * 25 12 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2081 1.1931 0.0000 4 6 3.5963 1.1457 -0.0059 5 17 4.5242 2.6128 -0.0138 6 6 4.2309 -0.0823 -0.0059 7 7 3.5350 -1.2028 0.0001 8 6 2.2113 -1.1984 0.0068 9 7 1.5170 -2.4069 0.0136 10 6 2.1935 -3.5726 0.0137 11 8 3.4090 -3.5700 0.0075 12 6 1.4571 -4.8546 0.0270 13 6 0.0578 -4.8583 0.0390 14 6 -0.6381 -6.0537 0.0451 15 6 0.0378 -7.2540 0.0521 16 6 1.4452 -7.2704 0.0461 17 6 2.1420 -8.5012 0.0527 18 1 1.6727 -9.3853 0.4580 19 6 3.4398 -8.5733 -0.4659 20 7 3.8838 -7.6260 -1.2515 21 14 4.5381 -10.0219 -0.0364 22 1 3.8053 -10.9491 0.8628 23 1 4.9221 -10.7377 -1.2795 24 1 5.7601 -9.5305 0.6495 25 6 2.1543 -6.0573 0.0329 26 1 -0.3634 0.0046 1.0276 27 1 -0.3633 0.8877 -0.5178 28 1 -0.3634 -0.8923 -0.5099 29 1 1.6879 2.1395 0.0004 30 1 5.3101 -0.1248 -0.0100 31 1 0.5471 -2.4090 0.0181 32 1 -0.4818 -3.9227 0.0380 33 1 -1.7180 -6.0460 0.0496 34 1 -0.5126 -8.1832 0.0617 35 1 4.7833 -7.6762 -1.6112 36 1 3.2343 -6.0593 0.0273 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000335784288.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 23:15:29 Heat of formation + Delta-G solvation = 20.156269 kcal Electronic energy + Delta-G solvation = -22602.667243 eV Core-core repulsion = 19077.550108 eV Total energy + Delta-G solvation = -3525.117136 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 316.072 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -40.88211 -38.96420 -37.14933 -36.64083 -34.80710 -33.78725 -33.58985 -30.96115 -29.78368 -29.49215 -27.45553 -25.44832 -24.34866 -22.56139 -21.89019 -21.03019 -19.78917 -18.36242 -17.65670 -16.54474 -16.23819 -15.71913 -15.26641 -15.13614 -14.70673 -14.44268 -13.96561 -13.91210 -13.36751 -13.20413 -13.14972 -12.96890 -12.80780 -12.58508 -12.20009 -12.14776 -11.71369 -11.30087 -11.23994 -11.14566 -10.82453 -10.56092 -10.32228 -10.18040 -9.78847 -9.72445 -9.69130 -9.28284 -8.81509 -8.09616 -7.72082 -7.60946 -6.86410 -4.48431 0.86984 1.10047 1.97288 2.11745 2.73917 3.05233 3.09041 3.09963 3.11053 3.50404 3.87528 3.93773 4.34479 4.56962 4.59547 4.67146 4.71074 5.03917 5.33399 5.35711 5.49876 5.51634 5.67335 5.80085 5.85368 5.96872 6.13483 6.17773 6.60958 6.71716 6.90326 6.91449 7.13101 7.28098 7.34385 7.60903 7.71623 7.86872 8.06027 8.13029 8.42136 8.71231 8.74255 8.76992 10.08320 Molecular weight = 316.07amu Principal moments of inertia in cm(-1) A = 0.018965 B = 0.003155 C = 0.002728 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1476.044530 B = 8873.666865 C =10261.857323 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.108 4.108 2 C -0.173 4.173 3 C -0.039 4.039 4 C -0.131 4.131 5 Cl -0.068 7.068 6 C 0.148 3.852 7 N -0.458 5.458 8 C 0.381 3.619 9 N -0.659 5.659 10 C 0.552 3.448 11 O -0.471 6.471 12 C -0.128 4.128 13 C -0.223 4.223 14 C -0.094 4.094 15 C -0.211 4.211 16 C 0.099 3.901 17 C -0.457 4.457 18 H 0.083 0.917 19 C 0.073 3.927 20 N -0.781 5.781 21 Si 0.911 3.089 22 H -0.259 1.259 23 H -0.273 1.273 24 H -0.270 1.270 25 C -0.088 4.088 26 H 0.076 0.924 27 H 0.075 0.925 28 H 0.068 0.932 29 H 0.144 0.856 30 H 0.165 0.835 31 H 0.417 0.583 32 H 0.088 0.912 33 H 0.095 0.905 34 H 0.097 0.903 35 H 0.285 0.715 36 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.221 15.446 1.675 16.100 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C -0.179 4.179 3 C -0.066 4.066 4 C -0.161 4.161 5 Cl -0.039 7.039 6 C -0.012 4.012 7 N -0.172 5.172 8 C 0.148 3.852 9 N -0.307 5.307 10 C 0.342 3.658 11 O -0.341 6.341 12 C -0.131 4.131 13 C -0.243 4.243 14 C -0.112 4.112 15 C -0.231 4.231 16 C 0.097 3.903 17 C -0.486 4.486 18 H 0.101 0.899 19 C -0.147 4.147 20 N -0.405 5.405 21 Si 0.735 3.265 22 H -0.183 1.183 23 H -0.199 1.199 24 H -0.195 1.195 25 C -0.108 4.108 26 H 0.095 0.905 27 H 0.094 0.906 28 H 0.087 0.913 29 H 0.162 0.838 30 H 0.182 0.818 31 H 0.257 0.743 32 H 0.106 0.894 33 H 0.113 0.887 34 H 0.115 0.885 35 H 0.097 0.903 36 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -2.637 14.656 1.515 14.969 hybrid contribution -0.339 0.419 0.013 0.539 sum -2.977 15.075 1.528 15.442 Atomic orbital electron populations 1.20683 0.89533 1.03387 1.02958 1.20260 0.97593 0.91426 1.08623 1.21089 0.91666 0.98276 0.95544 1.21914 0.92889 0.88794 1.12551 1.98351 1.73294 1.35011 1.97277 1.22743 1.00703 0.84935 0.92858 1.67995 1.05689 1.28606 1.14891 1.18558 0.88698 0.85775 0.92168 1.44011 1.10878 1.03484 1.72322 1.19175 0.87694 0.83417 0.75539 1.90821 1.13145 1.86472 1.43660 1.19367 0.93368 0.91306 1.09096 1.20290 0.92243 0.96333 1.15458 1.20425 0.97408 0.92825 1.00565 1.21118 0.94369 0.96036 1.11547 1.17605 0.91032 0.92977 0.88713 1.19640 0.98193 0.95838 1.34892 0.89902 1.25988 0.98415 0.97635 0.92671 1.69785 1.18049 1.31843 1.20828 0.86212 0.79941 0.81001 0.79361 1.18305 1.19858 1.19482 1.21643 1.00671 0.89594 0.98874 0.90493 0.90603 0.91294 0.83786 0.81777 0.74313 0.89432 0.88723 0.88458 0.90339 0.84728 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.90 9.58 36.00 0.35 -0.56 16 2 C -0.17 -2.07 5.91 -104.28 -0.62 -2.69 16 3 C -0.04 -0.43 9.66 -39.28 -0.38 -0.80 16 4 C -0.13 -1.57 6.34 -39.34 -0.25 -1.82 16 5 Cl -0.07 -0.70 28.99 -51.86 -1.50 -2.20 16 6 C 0.15 2.12 10.98 -17.52 -0.19 1.92 16 7 N -0.46 -8.27 7.87 -12.34 -0.10 -8.36 16 8 C 0.38 6.14 7.41 -154.72 -1.15 4.99 16 9 N -0.66 -11.14 5.25 -12.28 -0.06 -11.21 16 10 C 0.55 12.01 7.74 -12.33 -0.10 11.92 16 11 O -0.47 -11.83 14.57 5.32 0.08 -11.76 16 12 C -0.13 -2.93 5.87 -105.04 -0.62 -3.55 16 13 C -0.22 -4.46 9.55 -38.91 -0.37 -4.83 16 14 C -0.09 -1.91 10.01 -39.73 -0.40 -2.31 16 15 C -0.21 -4.83 9.78 -38.81 -0.38 -5.21 16 16 C 0.10 2.56 5.57 -106.87 -0.59 1.96 16 17 C -0.46 -11.73 9.05 -37.73 -0.34 -12.07 16 18 H 0.08 2.02 7.90 -52.49 -0.41 1.60 16 19 C 0.07 1.80 5.14 -17.34 -0.09 1.71 16 20 N -0.78 -20.36 10.97 55.55 0.61 -19.75 16 21 Si 0.91 18.48 29.59 -169.99 -5.03 13.45 16 22 H -0.26 -5.15 7.11 56.52 0.40 -4.75 16 23 H -0.27 -5.44 7.11 56.52 0.40 -5.04 16 24 H -0.27 -5.47 7.11 56.52 0.40 -5.07 16 25 C -0.09 -2.28 8.23 -38.44 -0.32 -2.60 16 26 H 0.08 0.56 8.14 -51.93 -0.42 0.14 16 27 H 0.08 0.49 8.10 -51.93 -0.42 0.07 16 28 H 0.07 0.56 6.57 -51.93 -0.34 0.22 16 29 H 0.14 1.13 8.06 -52.49 -0.42 0.71 16 30 H 0.17 2.04 8.06 -52.48 -0.42 1.62 16 31 H 0.42 5.67 4.70 -40.82 -0.19 5.48 16 32 H 0.09 1.39 6.38 -52.49 -0.33 1.06 16 33 H 0.09 1.61 8.06 -52.49 -0.42 1.19 16 34 H 0.10 2.07 8.06 -52.48 -0.42 1.65 16 35 H 0.29 6.84 8.30 -40.82 -0.34 6.50 16 36 H 0.14 3.81 5.76 -52.49 -0.30 3.50 16 LS Contribution 327.45 15.07 4.93 4.93 Total: -1.00 -30.18 327.45 -9.77 -39.95 By element: Atomic # 1 Polarization: 12.13 SS G_CDS: -3.25 Total: 8.87 kcal Atomic # 6 Polarization: -8.49 SS G_CDS: -5.44 Total: -13.93 kcal Atomic # 7 Polarization: -39.77 SS G_CDS: 0.45 Total: -39.32 kcal Atomic # 8 Polarization: -11.83 SS G_CDS: 0.08 Total: -11.76 kcal Atomic # 14 Polarization: 18.48 SS G_CDS: -5.03 Total: 13.45 kcal Atomic # 17 Polarization: -0.70 SS G_CDS: -1.50 Total: -2.20 kcal Total LS contribution 4.93 Total: 4.93 kcal Total: -30.18 -9.77 -39.95 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000335784288.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.108 kcal (2) G-P(sol) polarization free energy of solvation -30.183 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.926 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.769 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.952 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.156 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds