Wall clock time and date at job start Fri Apr 10 2020 23:23:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 N 1.46497 * 109.46914 * 2 1 4 4 N 1.28605 * 124.61778 * 90.02546 * 3 2 1 5 5 C 1.31380 * 108.71798 * 179.97438 * 4 3 2 6 6 C 1.39675 * 105.90155 * 0.02562 * 5 4 3 7 7 C 1.50703 * 127.05227 * 179.97438 * 6 5 4 8 8 N 1.46502 * 109.47002 * 95.00001 * 7 6 5 9 9 C 1.39663 * 119.99806 * 180.02562 * 8 7 6 10 10 C 1.38973 * 120.04649 * 0.02562 * 9 8 7 11 11 C 1.38116 * 120.03003 * 179.97438 * 10 9 8 12 12 C 1.38216 * 120.13578 * 359.74695 * 11 10 9 13 13 C 1.38779 * 120.08401 * 0.51068 * 12 11 10 14 14 O 1.35897 * 120.00949 * 179.76812 * 13 12 11 15 15 C 1.42898 * 117.00481 * 359.71829 * 14 13 12 16 16 C 1.52997 * 109.47319 * 180.02562 * 15 14 13 17 17 C 1.50697 * 109.47466 * 180.02562 * 16 15 14 18 18 H 1.08001 * 119.99890 * 0.02562 * 17 16 15 19 19 C 1.37876 * 120.00428 * 179.97438 * 17 16 15 20 20 N 1.31517 * 120.00362 * 180.02562 * 19 17 16 21 21 Si 1.86804 * 119.99850 * 359.97438 * 19 17 16 22 22 H 1.48504 * 109.47052 * 89.99717 * 21 19 17 23 23 H 1.48495 * 109.47307 * 209.99656 * 21 19 17 24 24 H 1.48500 * 109.47143 * 330.00164 * 21 19 17 25 25 C 1.38609 * 119.96517 * 359.48769 * 13 12 11 26 26 N 1.28602 * 124.62111 * 270.26666 * 3 2 1 27 27 H 1.09002 * 109.47204 * 179.97438 * 1 2 3 28 28 H 1.08998 * 109.47339 * 299.99740 * 1 2 3 29 29 H 1.08999 * 109.46950 * 60.00080 * 1 2 3 30 30 H 1.09005 * 109.47352 * 239.99840 * 2 1 3 31 31 H 1.08999 * 109.46950 * 119.99920 * 2 1 3 32 32 H 1.07995 * 127.04692 * 180.02562 * 5 4 3 33 33 H 1.09001 * 109.46841 * 335.00122 * 7 6 5 34 34 H 1.09000 * 109.46773 * 214.99766 * 7 6 5 35 35 H 0.97001 * 119.99801 * 359.97438 * 8 7 6 36 36 H 1.07996 * 119.98339 * 359.95966 * 10 9 8 37 37 H 1.08007 * 119.92769 * 180.02562 * 11 10 9 38 38 H 1.07991 * 119.95689 * 180.26971 * 12 11 10 39 39 H 1.09002 * 109.47259 * 300.00417 * 15 14 13 40 40 H 1.09001 * 109.47074 * 60.00439 * 15 14 13 41 41 H 1.09002 * 109.47153 * 300.00307 * 16 15 14 42 42 H 1.08998 * 109.47533 * 59.99936 * 16 15 14 43 43 H 0.96994 * 119.99814 * 180.02562 * 20 19 17 44 44 H 1.08007 * 120.06150 * 180.27477 * 25 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 7 2.2622 2.0699 1.0584 5 6 2.6837 3.2610 0.6984 6 6 2.6829 3.2614 -0.6983 7 6 3.0833 4.3955 -1.6063 8 7 4.4861 4.2360 -1.9975 9 6 5.0863 5.1723 -2.8423 10 6 4.3539 6.2559 -3.3120 11 6 4.9479 7.1819 -4.1470 12 6 6.2727 7.0367 -4.5134 13 6 7.0074 5.9537 -4.0517 14 8 8.3085 5.8098 -4.4167 15 6 8.8536 6.8074 -5.2827 16 6 10.3176 6.4785 -5.5817 17 6 10.8926 7.5308 -6.4943 18 1 10.2757 8.3523 -6.8275 19 6 12.2066 7.4456 -6.9032 20 7 12.7085 8.3642 -7.6994 21 14 13.2743 6.0259 -6.3253 22 1 13.1618 4.8989 -7.2859 23 1 14.6890 6.4703 -6.2472 24 1 12.8207 5.5796 -4.9835 25 6 6.4152 5.0221 -3.2135 26 7 2.2572 2.0717 -1.0583 27 1 -0.3634 -1.0277 -0.0005 28 1 -0.3634 0.5138 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 1.8934 -0.5139 -0.8900 31 1 1.8933 -0.5138 0.8900 32 1 2.9718 4.0734 1.3492 33 1 2.9579 5.3426 -1.0816 34 1 2.4547 4.3873 -2.4967 35 1 4.9983 3.4805 -1.6691 36 1 3.3197 6.3738 -3.0241 37 1 4.3772 8.0237 -4.5107 38 1 6.7355 7.7648 -5.1629 39 1 8.2885 6.8277 -6.2145 40 1 8.7913 7.7820 -4.7986 41 1 10.8829 6.4579 -4.6499 42 1 10.3796 5.5040 -6.0658 43 1 13.6328 8.3039 -7.9873 44 1 6.9869 4.1810 -2.8497 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000838867621.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 23:23:04 Heat of formation + Delta-G solvation = 92.974313 kcal Electronic energy + Delta-G solvation = -24253.828656 eV Core-core repulsion = 20595.118924 eV Total energy + Delta-G solvation = -3658.709733 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 316.164 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -44.02094 -39.78132 -37.89904 -35.93434 -34.79952 -33.29001 -32.88353 -31.42003 -31.00561 -29.73052 -28.66088 -26.64532 -25.08349 -24.55127 -22.82078 -22.33940 -21.62027 -20.92261 -20.25398 -18.12818 -17.89705 -16.96521 -16.70773 -16.43331 -15.66695 -15.51905 -15.36420 -15.31780 -14.75801 -14.53292 -14.49181 -14.08217 -13.66139 -13.40100 -13.29733 -12.90133 -12.86386 -12.74452 -12.44440 -12.04226 -11.99332 -11.66246 -11.57106 -11.31217 -11.21911 -10.84045 -10.72196 -10.66652 -10.13126 -10.06233 -9.85718 -9.73978 -9.72467 -9.30668 -8.59649 -7.98033 -7.36093 -6.10817 -4.11351 1.32677 1.70562 1.79829 1.85224 1.87145 3.30668 3.34210 3.37880 3.43700 3.59232 3.99342 4.10645 4.17098 4.21254 4.39284 4.41657 4.49342 4.68716 4.91541 5.00453 5.07885 5.11527 5.23268 5.23434 5.34546 5.37508 5.53421 5.57023 5.65695 5.71058 5.76886 5.99893 6.02150 6.08900 6.23463 6.37002 6.49270 6.60935 6.74089 6.85516 7.10829 7.27694 7.35096 7.60637 7.67250 7.87823 8.02806 8.42072 8.90400 9.49722 11.01732 Molecular weight = 316.16amu Principal moments of inertia in cm(-1) A = 0.024957 B = 0.001873 C = 0.001783 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1121.659553 B =14944.706762 C =15696.739246 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C 0.135 3.865 3 N -0.153 5.153 4 N -0.290 5.290 5 C -0.009 4.009 6 C -0.018 4.018 7 C 0.222 3.778 8 N -0.744 5.744 9 C 0.248 3.752 10 C -0.242 4.242 11 C -0.036 4.036 12 C -0.262 4.262 13 C 0.187 3.813 14 O -0.321 6.321 15 C 0.074 3.926 16 C -0.010 4.010 17 C -0.526 4.526 18 H 0.075 0.925 19 C 0.072 3.928 20 N -0.898 5.898 21 Si 0.880 3.120 22 H -0.275 1.275 23 H -0.286 1.286 24 H -0.263 1.263 25 C -0.236 4.236 26 N -0.268 5.268 27 H 0.087 0.913 28 H 0.067 0.933 29 H 0.067 0.933 30 H 0.109 0.891 31 H 0.109 0.891 32 H 0.199 0.801 33 H 0.083 0.917 34 H 0.076 0.924 35 H 0.399 0.601 36 H 0.117 0.883 37 H 0.120 0.880 38 H 0.128 0.872 39 H 0.057 0.943 40 H 0.057 0.943 41 H 0.027 0.973 42 H 0.023 0.977 43 H 0.265 0.735 44 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -26.610 -13.907 17.356 34.681 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C 0.015 3.985 3 N -0.054 5.054 4 N -0.130 5.130 5 C -0.192 4.192 6 C -0.181 4.181 7 C 0.096 3.904 8 N -0.376 5.376 9 C 0.146 3.854 10 C -0.265 4.265 11 C -0.054 4.054 12 C -0.282 4.282 13 C 0.139 3.861 14 O -0.233 6.233 15 C -0.001 4.001 16 C -0.047 4.047 17 C -0.564 4.564 18 H 0.093 0.907 19 C -0.130 4.130 20 N -0.536 5.536 21 Si 0.707 3.293 22 H -0.201 1.201 23 H -0.212 1.212 24 H -0.188 1.188 25 C -0.259 4.259 26 N -0.111 5.111 27 H 0.105 0.895 28 H 0.086 0.914 29 H 0.087 0.913 30 H 0.128 0.872 31 H 0.127 0.873 32 H 0.216 0.784 33 H 0.101 0.899 34 H 0.094 0.906 35 H 0.234 0.766 36 H 0.135 0.865 37 H 0.138 0.862 38 H 0.146 0.854 39 H 0.075 0.925 40 H 0.076 0.924 41 H 0.045 0.955 42 H 0.041 0.959 43 H 0.075 0.925 44 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges -26.968 -15.278 17.353 35.522 hybrid contribution 1.075 0.092 0.248 1.107 sum -25.892 -15.186 17.602 34.797 Atomic orbital electron populations 1.22185 0.93001 1.04030 1.03692 1.22030 0.96128 0.74351 1.05962 1.48226 1.44642 1.13338 0.99224 1.74092 1.17297 1.05531 1.16117 1.24735 1.04045 0.95826 0.94589 1.23123 1.06247 0.94430 0.94254 1.19305 0.83114 0.92311 0.95701 1.44473 1.10717 1.28605 1.53807 1.17290 0.90693 0.88565 0.88855 1.20401 1.00237 0.98053 1.07798 1.20635 0.93761 0.96942 0.94101 1.21175 0.96217 1.01472 1.09377 1.18763 0.83868 0.92332 0.91160 1.86092 1.22095 1.51190 1.63969 1.23061 0.96630 0.89270 0.91090 1.19588 0.89341 0.98125 0.97647 1.20857 0.97153 1.09583 1.28783 0.90703 1.24930 0.97683 0.96032 0.94361 1.69894 1.15115 1.34352 1.34278 0.86763 0.79600 0.82763 0.80176 1.20091 1.21205 1.18752 1.19631 0.94175 1.03726 1.08375 1.74054 1.16169 1.05085 1.15831 0.89459 0.91412 0.91343 0.87248 0.87268 0.78374 0.89907 0.90593 0.76616 0.86495 0.86188 0.85438 0.92472 0.92425 0.95457 0.95893 0.92489 0.85883 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.59 10.24 37.16 0.38 -0.21 16 2 C 0.13 0.61 7.26 -4.04 -0.03 0.58 16 3 N -0.15 -1.30 3.95 -10.62 -0.04 -1.34 16 4 N -0.29 -2.69 12.05 30.67 0.37 -2.32 16 5 C -0.01 -0.07 12.16 -17.21 -0.21 -0.28 16 6 C -0.02 -0.16 6.72 -82.25 -0.55 -0.71 16 7 C 0.22 1.79 5.50 -5.19 -0.03 1.76 16 8 N -0.74 -7.54 5.72 -59.82 -0.34 -7.88 16 9 C 0.25 3.17 6.65 -83.81 -0.56 2.62 16 10 C -0.24 -2.93 9.31 -39.35 -0.37 -3.30 16 11 C -0.04 -0.47 10.03 -39.63 -0.40 -0.86 16 12 C -0.26 -4.15 9.04 -39.39 -0.36 -4.51 16 13 C 0.19 3.26 6.68 -39.24 -0.26 3.00 16 14 O -0.32 -6.47 10.13 -19.42 -0.20 -6.66 16 15 C 0.07 1.55 4.68 37.16 0.17 1.73 16 16 C -0.01 -0.24 4.41 -27.89 -0.12 -0.36 16 17 C -0.53 -14.98 9.66 -34.44 -0.33 -15.32 16 18 H 0.07 2.25 7.99 -52.49 -0.42 1.83 16 19 C 0.07 2.10 5.47 -17.82 -0.10 2.00 16 20 N -0.90 -27.47 13.96 55.43 0.77 -26.69 16 21 Si 0.88 21.80 27.47 -169.99 -4.67 17.13 16 22 H -0.28 -6.69 7.11 56.52 0.40 -6.29 16 23 H -0.29 -6.97 7.11 56.52 0.40 -6.57 16 24 H -0.26 -6.34 6.54 56.52 0.37 -5.97 16 25 C -0.24 -3.59 9.83 -39.24 -0.39 -3.97 16 26 N -0.27 -2.65 12.05 33.72 0.41 -2.24 16 27 H 0.09 0.11 8.14 -51.93 -0.42 -0.31 16 28 H 0.07 0.29 8.14 -51.93 -0.42 -0.13 16 29 H 0.07 0.32 8.14 -51.93 -0.42 -0.11 16 30 H 0.11 0.37 8.14 -51.93 -0.42 -0.05 16 31 H 0.11 0.32 8.14 -51.93 -0.42 -0.10 16 32 H 0.20 1.03 8.06 -52.49 -0.42 0.60 16 33 H 0.08 0.53 7.95 -51.93 -0.41 0.12 16 34 H 0.08 0.63 7.95 -51.93 -0.41 0.21 16 35 H 0.40 3.96 8.47 -40.82 -0.35 3.61 16 36 H 0.12 1.12 6.73 -52.49 -0.35 0.76 16 37 H 0.12 1.27 8.06 -52.48 -0.42 0.84 16 38 H 0.13 2.02 6.29 -52.49 -0.33 1.69 16 39 H 0.06 1.17 7.67 -51.93 -0.40 0.77 16 40 H 0.06 1.17 7.65 -51.93 -0.40 0.78 16 41 H 0.03 0.68 7.20 -51.93 -0.37 0.30 16 42 H 0.02 0.56 7.57 -51.93 -0.39 0.17 16 43 H 0.27 7.57 8.31 -40.82 -0.34 7.23 16 44 H 0.12 1.78 8.06 -52.48 -0.42 1.36 16 LS Contribution 372.38 15.07 5.61 5.61 Total: -1.00 -33.86 372.38 -7.62 -41.48 By element: Atomic # 1 Polarization: 7.14 SS G_CDS: -6.39 Total: 0.75 kcal Atomic # 6 Polarization: -14.69 SS G_CDS: -3.14 Total: -17.84 kcal Atomic # 7 Polarization: -41.63 SS G_CDS: 1.17 Total: -40.47 kcal Atomic # 8 Polarization: -6.47 SS G_CDS: -0.20 Total: -6.66 kcal Atomic # 14 Polarization: 21.80 SS G_CDS: -4.67 Total: 17.13 kcal Total LS contribution 5.61 Total: 5.61 kcal Total: -33.86 -7.62 -41.48 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000838867621.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 134.454 kcal (2) G-P(sol) polarization free energy of solvation -33.861 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 100.593 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.619 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.480 kcal (6) G-S(sol) free energy of system = (1) + (5) 92.974 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds