Wall clock time and date at job start Sat Apr 11 2020 00:48:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 C 1.53003 * 109.47114 * 2 1 4 4 N 1.46501 * 109.46947 * 120.00095 * 2 1 3 5 5 C 1.46505 * 119.99878 * 299.99969 * 4 2 1 6 6 C 1.50696 * 109.46769 * 270.00163 * 5 4 2 7 7 C 1.38220 * 120.01451 * 105.00738 * 6 5 4 8 8 C 1.38219 * 120.02713 * 179.97438 * 7 6 5 9 9 C 1.38267 * 120.05312 * 0.02562 * 8 7 6 10 10 C 1.38175 * 120.02227 * 0.02562 * 9 8 7 11 11 C 1.38446 * 120.01365 * 284.72053 * 6 5 4 12 12 F 1.35095 * 120.02272 * 0.02562 * 11 6 5 13 13 C 1.34770 * 119.99838 * 120.00180 * 4 2 1 14 14 O 1.21286 * 119.99886 * 180.02562 * 13 4 2 15 15 C 1.50701 * 120.00293 * 359.97438 * 13 4 2 16 16 H 1.09002 * 109.47060 * 40.00174 * 15 13 4 17 17 N 1.46896 * 109.47239 * 160.00327 * 15 13 4 18 18 C 1.52997 * 109.47212 * 280.00118 * 15 13 4 19 19 C 1.52994 * 109.47404 * 174.99684 * 18 15 13 20 20 C 1.50698 * 109.47502 * 179.97438 * 19 18 15 21 21 H 1.08005 * 119.99844 * 0.02562 * 20 19 18 22 22 C 1.37873 * 120.00426 * 180.02562 * 20 19 18 23 23 N 1.31514 * 119.99772 * 0.02562 * 22 20 19 24 24 Si 1.86798 * 120.00342 * 180.02562 * 22 20 19 25 25 H 1.48498 * 109.47135 * 0.02562 * 24 22 20 26 26 H 1.48501 * 109.47472 * 120.00127 * 24 22 20 27 27 H 1.48502 * 109.47317 * 240.00326 * 24 22 20 28 28 H 1.08995 * 109.47064 * 299.99912 * 1 2 3 29 29 H 1.09006 * 109.46614 * 60.00288 * 1 2 3 30 30 H 1.09003 * 109.46739 * 179.97438 * 1 2 3 31 31 H 1.09003 * 109.46736 * 240.00047 * 2 1 3 32 32 H 1.08996 * 109.46664 * 179.97438 * 3 2 1 33 33 H 1.09002 * 109.46797 * 300.00036 * 3 2 1 34 34 H 1.09001 * 109.46980 * 59.99666 * 3 2 1 35 35 H 1.08994 * 109.47012 * 30.00252 * 5 4 2 36 36 H 1.08997 * 109.46634 * 150.00259 * 5 4 2 37 37 H 1.08004 * 119.98745 * 359.97438 * 7 6 5 38 38 H 1.08007 * 119.97361 * 179.97438 * 8 7 6 39 39 H 1.07998 * 119.99138 * 179.97438 * 9 8 7 40 40 H 1.08002 * 120.00840 * 179.97438 * 10 9 8 41 41 H 1.00907 * 110.99811 * 296.04225 * 17 15 13 42 42 H 1.00900 * 111.00550 * 59.99964 * 17 15 13 43 43 H 1.09000 * 109.47325 * 294.99852 * 18 15 13 44 44 H 1.09008 * 109.47017 * 54.99761 * 18 15 13 45 45 H 1.09000 * 109.47476 * 300.00087 * 19 18 15 46 46 H 1.09008 * 109.46970 * 60.00049 * 19 18 15 47 47 H 0.97002 * 119.99862 * 180.02562 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 7 2.0184 -0.6906 1.1962 5 6 1.6644 -0.1901 2.5268 6 6 2.7031 0.8018 2.9830 7 6 2.4186 2.1544 2.9739 8 6 3.3710 3.0643 3.3927 9 6 4.6094 2.6230 3.8208 10 6 4.8965 1.2714 3.8297 11 6 3.9407 0.3583 3.4169 12 9 4.2181 -0.9638 3.4312 13 6 2.7932 -1.7864 1.0725 14 8 3.1971 -2.3584 2.0628 15 6 3.1569 -2.3016 -0.2962 16 1 3.3710 -1.4607 -0.9559 17 7 4.3444 -3.1605 -0.1966 18 6 1.9887 -3.1104 -0.8637 19 6 2.3078 -3.5280 -2.3005 20 6 1.1575 -4.3252 -2.8593 21 1 0.2857 -4.5147 -2.2506 22 6 1.2179 -4.8127 -4.1475 23 7 2.2797 -4.5824 -4.8886 24 14 -0.2083 -5.8003 -4.8404 25 1 -1.2745 -5.9172 -3.8134 26 1 -0.7503 -5.1126 -6.0398 27 1 0.2658 -7.1558 -5.2189 28 1 -0.3633 0.5138 0.8899 29 1 -0.3633 0.5138 -0.8901 30 1 -0.3633 -1.0277 -0.0005 31 1 1.8933 -0.5138 -0.8900 32 1 3.1300 1.4424 0.0005 33 1 1.6767 1.9563 -0.8900 34 1 1.6767 1.9564 0.8900 35 1 0.6904 0.2973 2.4843 36 1 1.6238 -1.0226 3.2291 37 1 1.4517 2.5004 2.6394 38 1 3.1478 4.1211 3.3849 39 1 5.3529 3.3349 4.1474 40 1 5.8641 0.9269 4.1637 41 1 5.1466 -2.6336 0.1149 42 1 4.1713 -3.9480 0.4100 43 1 1.8319 -3.9997 -0.2532 44 1 1.0857 -2.4998 -0.8549 45 1 2.4646 -2.6388 -2.9111 46 1 3.2108 -4.1386 -2.3094 47 1 2.3220 -4.9251 -5.7951 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000424092865.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 00:48:53 Heat of formation + Delta-G solvation = -61.562839 kcal Electronic energy + Delta-G solvation = -28594.057984 eV Core-core repulsion = 24690.959526 eV Total energy + Delta-G solvation = -3903.098458 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 322.180 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -48.68895 -40.37830 -39.01973 -36.65807 -35.28088 -32.92399 -32.60367 -31.30209 -30.46474 -30.05904 -27.53144 -27.14972 -25.65246 -23.43699 -22.99738 -22.02917 -21.53596 -20.20709 -18.64149 -17.69159 -17.41261 -16.37240 -16.31079 -16.11095 -15.87931 -15.44887 -15.21122 -14.71326 -14.50787 -14.31202 -14.16520 -13.97282 -13.59729 -13.43643 -13.27482 -12.88288 -12.73074 -12.47038 -12.28428 -12.12968 -11.95834 -11.88435 -11.61266 -11.54450 -11.32496 -11.20458 -10.89976 -10.84005 -10.58128 -10.45487 -9.96450 -9.75474 -9.34717 -9.18684 -8.96823 -8.87564 -8.61649 -8.30759 -8.13314 -5.92669 -3.94584 0.90337 0.98699 2.86878 3.02207 3.34242 3.41999 3.45718 3.49441 4.18710 4.43593 4.50184 4.52230 4.68405 4.72380 4.78297 4.92858 5.05061 5.05304 5.11276 5.21355 5.29029 5.43006 5.47457 5.53982 5.59231 5.60130 5.69427 5.74988 5.85424 5.88484 5.92996 5.95578 6.05500 6.08170 6.13717 6.20843 6.48956 6.58639 6.69890 6.72161 7.11523 7.41219 7.59165 7.77775 7.85518 7.97987 8.15072 8.39778 8.50160 9.13648 9.68532 11.18238 Molecular weight = 322.18amu Principal moments of inertia in cm(-1) A = 0.021644 B = 0.003232 C = 0.003022 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1293.363369 B = 8661.375138 C = 9262.828873 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C 0.123 3.877 3 C -0.167 4.167 4 N -0.603 5.603 5 C 0.152 3.848 6 C -0.138 4.138 7 C -0.079 4.079 8 C -0.139 4.139 9 C -0.090 4.090 10 C -0.164 4.164 11 C 0.117 3.883 12 F -0.110 7.110 13 C 0.479 3.521 14 O -0.532 6.532 15 C 0.078 3.922 16 H 0.095 0.905 17 N -0.807 5.807 18 C -0.096 4.096 19 C 0.032 3.968 20 C -0.520 4.520 21 H 0.052 0.948 22 C 0.058 3.942 23 N -0.892 5.892 24 Si 0.887 3.113 25 H -0.274 1.274 26 H -0.285 1.285 27 H -0.285 1.285 28 H 0.054 0.946 29 H 0.071 0.929 30 H 0.066 0.934 31 H 0.106 0.894 32 H 0.056 0.944 33 H 0.067 0.933 34 H 0.063 0.937 35 H 0.088 0.912 36 H 0.091 0.909 37 H 0.131 0.869 38 H 0.127 0.873 39 H 0.129 0.871 40 H 0.132 0.868 41 H 0.333 0.667 42 H 0.347 0.653 43 H 0.052 0.948 44 H 0.055 0.945 45 H 0.012 0.988 46 H 0.034 0.966 47 H 0.258 0.742 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.935 18.554 16.645 24.943 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.221 4.221 2 C 0.019 3.981 3 C -0.225 4.225 4 N -0.337 5.337 5 C 0.029 3.971 6 C -0.140 4.140 7 C -0.098 4.098 8 C -0.157 4.157 9 C -0.109 4.109 10 C -0.183 4.183 11 C 0.097 3.903 12 F -0.088 7.088 13 C 0.266 3.734 14 O -0.408 6.408 15 C -0.037 4.037 16 H 0.113 0.887 17 N -0.334 5.334 18 C -0.135 4.135 19 C -0.005 4.005 20 C -0.558 4.558 21 H 0.070 0.930 22 C -0.143 4.143 23 N -0.532 5.532 24 Si 0.716 3.284 25 H -0.199 1.199 26 H -0.211 1.211 27 H -0.211 1.211 28 H 0.073 0.927 29 H 0.090 0.910 30 H 0.085 0.915 31 H 0.124 0.876 32 H 0.075 0.925 33 H 0.086 0.914 34 H 0.082 0.918 35 H 0.106 0.894 36 H 0.110 0.890 37 H 0.149 0.851 38 H 0.145 0.855 39 H 0.147 0.853 40 H 0.150 0.850 41 H 0.144 0.856 42 H 0.161 0.839 43 H 0.071 0.929 44 H 0.073 0.927 45 H 0.030 0.970 46 H 0.053 0.947 47 H 0.068 0.932 Dipole moment (debyes) X Y Z Total from point charges 1.148 17.989 16.191 24.230 hybrid contribution -0.695 -0.332 0.571 0.959 sum 0.452 17.657 16.762 24.350 Atomic orbital electron populations 1.22172 0.94640 1.03182 1.02092 1.21357 0.94821 0.93468 0.88406 1.22353 1.01609 0.95948 1.02568 1.48219 1.51664 1.28285 1.05508 1.20151 0.95070 0.96134 0.85702 1.20395 0.95443 0.95702 1.02446 1.20936 0.99681 0.91380 0.97801 1.21137 0.93854 0.99845 1.00892 1.20996 0.96994 0.94652 0.98228 1.21210 0.99729 0.93473 1.03865 1.17762 0.93995 0.79064 0.99476 1.91724 1.93698 1.29959 1.93456 1.22763 0.77165 0.79367 0.94109 1.90694 1.53040 1.57212 1.39852 1.21846 0.94237 0.97064 0.90565 0.88744 1.59030 1.04153 1.11592 1.58650 1.21696 0.93158 0.97727 1.00882 1.19009 0.97470 0.96501 0.87538 1.21308 1.02985 1.33431 0.98115 0.92972 1.24988 0.95737 0.96399 0.97212 1.69987 1.28057 1.46086 1.09027 0.86613 0.82807 0.80059 0.78955 1.19865 1.21127 1.21078 0.92709 0.91042 0.91471 0.87593 0.92535 0.91391 0.91836 0.89417 0.89039 0.85115 0.85517 0.85335 0.85031 0.85584 0.83887 0.92917 0.92672 0.96994 0.94716 0.93186 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -1.70 9.09 37.16 0.34 -1.37 16 2 C 0.12 1.44 2.49 -67.92 -0.17 1.27 16 3 C -0.17 -1.61 8.48 37.16 0.32 -1.30 16 4 N -0.60 -8.03 2.39 -167.46 -0.40 -8.43 16 5 C 0.15 1.79 4.87 -5.19 -0.03 1.77 16 6 C -0.14 -1.54 4.76 -104.55 -0.50 -2.03 16 7 C -0.08 -0.68 7.67 -39.59 -0.30 -0.98 16 8 C -0.14 -1.07 10.04 -39.58 -0.40 -1.46 16 9 C -0.09 -0.74 10.04 -39.59 -0.40 -1.14 16 10 C -0.16 -1.70 10.03 -39.52 -0.40 -2.10 16 11 C 0.12 1.50 7.20 -39.42 -0.28 1.22 16 12 F -0.11 -1.77 13.07 2.25 0.03 -1.74 16 13 C 0.48 7.88 6.68 -10.99 -0.07 7.80 16 14 O -0.53 -9.96 12.42 5.55 0.07 -9.89 16 15 C 0.08 1.37 2.29 -68.87 -0.16 1.21 16 16 H 0.09 1.60 6.62 -51.93 -0.34 1.26 16 17 N -0.81 -14.29 8.44 -5.66 -0.05 -14.34 16 18 C -0.10 -1.97 4.47 -26.74 -0.12 -2.09 16 19 C 0.03 0.82 4.86 -27.89 -0.14 0.68 16 20 C -0.52 -14.67 9.11 -34.44 -0.31 -14.98 16 21 H 0.05 1.44 7.74 -52.48 -0.41 1.03 16 22 C 0.06 1.66 5.46 -17.82 -0.10 1.56 16 23 N -0.89 -26.90 13.29 55.43 0.74 -26.16 16 24 Si 0.89 21.74 29.54 -169.99 -5.02 16.72 16 25 H -0.27 -6.57 7.11 56.52 0.40 -6.17 16 26 H -0.29 -6.87 7.11 56.52 0.40 -6.47 16 27 H -0.28 -6.95 7.11 56.52 0.40 -6.55 16 28 H 0.05 0.47 6.66 -51.93 -0.35 0.13 16 29 H 0.07 0.68 8.14 -51.93 -0.42 0.25 16 30 H 0.07 0.82 7.54 -51.93 -0.39 0.43 16 31 H 0.11 1.44 4.85 -51.93 -0.25 1.19 16 32 H 0.06 0.61 8.14 -51.93 -0.42 0.19 16 33 H 0.07 0.58 8.14 -51.93 -0.42 0.16 16 34 H 0.06 0.53 4.40 -51.93 -0.23 0.30 16 35 H 0.09 0.81 6.24 -51.93 -0.32 0.48 16 36 H 0.09 1.25 7.35 -51.93 -0.38 0.87 16 37 H 0.13 0.84 7.01 -52.48 -0.37 0.47 16 38 H 0.13 0.66 8.06 -52.48 -0.42 0.24 16 39 H 0.13 0.73 8.06 -52.49 -0.42 0.31 16 40 H 0.13 1.20 8.06 -52.49 -0.42 0.78 16 41 H 0.33 5.28 9.06 -39.29 -0.36 4.92 16 42 H 0.35 6.24 8.58 -39.29 -0.34 5.91 16 43 H 0.05 1.13 8.14 -51.93 -0.42 0.71 16 44 H 0.05 1.06 6.38 -51.92 -0.33 0.73 16 45 H 0.01 0.32 8.14 -51.93 -0.42 -0.11 16 46 H 0.03 0.97 7.75 -51.92 -0.40 0.57 16 47 H 0.26 7.35 8.31 -40.82 -0.34 7.01 16 LS Contribution 371.40 15.07 5.60 5.60 Total: -1.00 -32.80 371.40 -8.74 -41.54 By element: Atomic # 1 Polarization: 15.63 SS G_CDS: -6.99 Total: 8.64 kcal Atomic # 6 Polarization: -9.21 SS G_CDS: -2.72 Total: -11.93 kcal Atomic # 7 Polarization: -49.22 SS G_CDS: 0.29 Total: -48.93 kcal Atomic # 8 Polarization: -9.96 SS G_CDS: 0.07 Total: -9.89 kcal Atomic # 9 Polarization: -1.77 SS G_CDS: 0.03 Total: -1.74 kcal Atomic # 14 Polarization: 21.74 SS G_CDS: -5.02 Total: 16.72 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -32.80 -8.74 -41.54 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000424092865.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.022 kcal (2) G-P(sol) polarization free energy of solvation -32.802 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.824 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.738 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.541 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.563 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds