Wall clock time and date at job start Sat Apr 11 2020 01:13:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.52997 * 109.47019 * 2 1 4 4 C 1.52991 * 109.47338 * 294.46800 * 3 2 1 5 5 C 1.53007 * 109.46916 * 174.46757 * 3 2 1 6 6 N 1.46505 * 109.46851 * 54.47071 * 3 2 1 7 7 C 1.46502 * 119.99508 * 238.34354 * 6 3 2 8 8 C 1.50692 * 109.47191 * 269.99900 * 7 6 3 9 9 H 1.07998 * 120.00433 * 0.02562 * 8 7 6 10 10 C 1.37888 * 119.99741 * 180.02562 * 8 7 6 11 11 N 1.31506 * 119.99913 * 0.02562 * 10 8 7 12 12 Si 1.86805 * 119.99778 * 180.02562 * 10 8 7 13 13 H 1.48503 * 109.47009 * 60.00450 * 12 10 8 14 14 H 1.48498 * 109.46698 * 180.02562 * 12 10 8 15 15 H 1.48494 * 109.47214 * 300.00096 * 12 10 8 16 16 C 1.34771 * 120.00153 * 58.34837 * 6 3 2 17 17 O 1.21559 * 120.00222 * 5.08261 * 16 6 3 18 18 C 1.47780 * 119.99991 * 185.08234 * 16 6 3 19 19 C 1.40097 * 120.54524 * 303.91311 * 18 16 6 20 20 C 1.38254 * 118.30387 * 180.27489 * 19 18 16 21 21 C 1.38553 * 119.29783 * 359.97438 * 20 19 18 22 22 Cl 1.73593 * 119.47942 * 179.97438 * 21 20 19 23 23 N 1.32044 * 121.04463 * 0.02562 * 21 20 19 24 24 C 1.31685 * 121.86078 * 0.02562 * 23 21 20 25 25 C 1.50706 * 119.70968 * 180.02562 * 24 23 21 26 26 H 1.08998 * 109.47356 * 179.97438 * 1 2 3 27 27 H 1.08993 * 109.47315 * 299.99903 * 1 2 3 28 28 H 1.09003 * 109.47156 * 59.99942 * 1 2 3 29 29 H 1.09007 * 109.47227 * 240.00329 * 2 1 3 30 30 H 1.09003 * 109.47156 * 120.00058 * 2 1 3 31 31 H 1.09006 * 109.47486 * 179.97438 * 4 3 2 32 32 H 1.08996 * 109.47411 * 300.00021 * 4 3 2 33 33 H 1.08996 * 109.47211 * 60.00445 * 4 3 2 34 34 H 1.09002 * 109.47169 * 306.46342 * 5 3 2 35 35 H 1.08991 * 109.47284 * 66.46619 * 5 3 2 36 36 H 1.09002 * 109.46903 * 186.46842 * 5 3 2 37 37 H 1.08995 * 109.47024 * 30.00869 * 7 6 3 38 38 H 1.09006 * 109.46698 * 150.00192 * 7 6 3 39 39 H 0.97004 * 120.00135 * 179.97438 * 11 10 8 40 40 H 1.08000 * 120.84509 * 0.25391 * 19 18 16 41 41 H 1.08002 * 120.34635 * 180.02562 * 20 19 18 42 42 H 1.09004 * 109.46908 * 273.43490 * 25 24 23 43 43 H 1.09002 * 109.47011 * 33.43413 * 25 24 23 44 44 H 1.08994 * 109.47196 * 153.43448 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 1.6467 2.1225 -1.3129 5 6 3.5637 1.4447 0.1391 6 7 1.4459 2.1704 1.1241 7 6 0.6511 3.3762 0.8778 8 6 1.5516 4.5843 0.8987 9 1 2.6101 4.4659 1.0771 10 6 1.0240 5.8410 0.6900 11 7 -0.2650 5.9853 0.4733 12 14 2.1404 7.3386 0.7152 13 1 3.1740 7.2033 -0.3425 14 1 1.3344 8.5609 0.4669 15 1 2.7999 7.4421 2.0416 16 6 1.6307 1.7308 2.3847 17 8 2.3649 0.7857 2.5973 18 6 0.9406 2.3978 3.5084 19 6 1.0949 3.7737 3.7228 20 6 0.4326 4.3489 4.7914 21 6 -0.3555 3.5541 5.6080 22 17 -1.1887 4.2713 6.9515 23 7 -0.4821 2.2595 5.3811 24 6 0.1296 1.6667 4.3769 25 6 -0.0495 0.1857 4.1626 26 1 -0.3634 -1.0276 -0.0005 27 1 -0.3633 0.5138 0.8899 28 1 -0.3633 0.5139 -0.8900 29 1 1.8933 -0.5138 -0.8901 30 1 1.8933 -0.5139 0.8900 31 1 2.0096 3.1503 -1.3127 32 1 2.0886 1.5809 -2.1492 33 1 0.5612 2.1210 -1.4119 34 1 3.8495 0.8613 1.0144 35 1 4.0105 1.0049 -0.7524 36 1 3.9164 2.4696 0.2545 37 1 0.1676 3.3000 -0.0960 38 1 -0.1082 3.4755 1.6536 39 1 -0.6363 6.8695 0.3268 40 1 1.7157 4.3696 3.0702 41 1 0.5280 5.4068 4.9870 42 1 0.6796 -0.3590 4.7624 43 1 -1.0564 -0.1055 4.4618 44 1 0.0986 -0.0494 3.1086 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000189932527.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 01:13:04 Heat of formation + Delta-G solvation = -15.471226 kcal Electronic energy + Delta-G solvation = -27167.661197 eV Core-core repulsion = 23531.753223 eV Total energy + Delta-G solvation = -3635.907974 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 324.135 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -40.56958 -39.17097 -36.60555 -36.22548 -34.09967 -32.66242 -32.29056 -31.46988 -29.94648 -27.89891 -27.46634 -26.42152 -24.13901 -23.27171 -22.56766 -22.04400 -20.63904 -18.04216 -16.99252 -16.70872 -16.34668 -16.10531 -15.54209 -14.73886 -14.68072 -14.43094 -14.20135 -13.83765 -13.42731 -12.95761 -12.90048 -12.70228 -12.67694 -12.44014 -12.07300 -12.01168 -11.92435 -11.78426 -11.57405 -11.28968 -11.23038 -11.14389 -11.12371 -11.10799 -10.77805 -10.65744 -10.40082 -10.29454 -10.14995 -9.81503 -9.49637 -9.39675 -8.90256 -8.69276 -8.45888 -7.77611 -6.31691 -4.39696 1.03141 1.55496 1.99029 3.12869 3.19202 3.20718 3.25433 3.68587 4.00236 4.20419 4.56801 4.97415 5.01323 5.10801 5.24256 5.30067 5.40685 5.46599 5.60857 5.70923 5.73064 5.84937 5.92335 5.93563 5.99895 6.13009 6.14721 6.20517 6.23900 6.37554 6.41003 6.44129 6.51532 6.56380 6.63037 6.76286 6.82150 6.85536 6.92574 7.15162 7.48709 7.62536 7.92281 7.95126 8.23258 8.65134 8.87089 9.26468 10.73583 Molecular weight = 324.13amu Principal moments of inertia in cm(-1) A = 0.009386 B = 0.006725 C = 0.004402 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2982.467629 B = 4162.574254 C = 6359.591454 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.134 4.134 3 C 0.180 3.820 4 C -0.151 4.151 5 C -0.158 4.158 6 N -0.574 5.574 7 C 0.229 3.771 8 C -0.543 4.543 9 H 0.063 0.937 10 C 0.071 3.929 11 N -0.879 5.879 12 Si 0.889 3.111 13 H -0.275 1.275 14 H -0.285 1.285 15 H -0.273 1.273 16 C 0.568 3.432 17 O -0.555 6.555 18 C -0.165 4.165 19 C -0.005 4.005 20 C -0.166 4.166 21 C 0.187 3.813 22 Cl -0.045 7.045 23 N -0.492 5.492 24 C 0.179 3.821 25 C -0.098 4.098 26 H 0.046 0.954 27 H 0.053 0.947 28 H 0.054 0.946 29 H 0.062 0.938 30 H 0.079 0.921 31 H 0.080 0.920 32 H 0.053 0.947 33 H 0.062 0.938 34 H 0.072 0.928 35 H 0.051 0.949 36 H 0.058 0.942 37 H 0.047 0.953 38 H 0.035 0.965 39 H 0.268 0.732 40 H 0.180 0.820 41 H 0.144 0.856 42 H 0.083 0.917 43 H 0.074 0.926 44 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.630 -6.108 2.533 6.642 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.172 4.172 3 C 0.096 3.904 4 C -0.208 4.208 5 C -0.216 4.216 6 N -0.304 5.304 7 C 0.109 3.891 8 C -0.581 4.581 9 H 0.081 0.919 10 C -0.134 4.134 11 N -0.516 5.516 12 Si 0.716 3.284 13 H -0.200 1.200 14 H -0.210 1.210 15 H -0.199 1.199 16 C 0.355 3.645 17 O -0.436 6.436 18 C -0.170 4.170 19 C -0.030 4.030 20 C -0.187 4.187 21 C 0.023 3.977 22 Cl -0.016 7.016 23 N -0.204 5.204 24 C 0.041 3.959 25 C -0.156 4.156 26 H 0.065 0.935 27 H 0.072 0.928 28 H 0.073 0.927 29 H 0.080 0.920 30 H 0.098 0.902 31 H 0.099 0.901 32 H 0.072 0.928 33 H 0.081 0.919 34 H 0.091 0.909 35 H 0.070 0.930 36 H 0.077 0.923 37 H 0.065 0.935 38 H 0.052 0.948 39 H 0.078 0.922 40 H 0.197 0.803 41 H 0.162 0.838 42 H 0.102 0.898 43 H 0.093 0.907 44 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 0.234 -6.867 3.223 7.589 hybrid contribution 0.768 1.851 -0.432 2.050 sum 1.001 -5.015 2.791 5.826 Atomic orbital electron populations 1.21747 0.96025 1.00530 1.02141 1.21939 0.96068 0.96533 1.02643 1.20224 0.92850 0.90802 0.86534 1.22129 1.01918 1.02244 0.94482 1.22195 0.94807 1.02601 1.02021 1.48289 1.50549 1.27615 1.03959 1.19596 0.90838 0.80051 0.98618 1.21404 0.94893 0.90975 1.50839 0.91872 1.24929 0.94975 0.98871 0.94587 1.69902 1.11188 1.24099 1.46407 0.86697 0.80678 0.82028 0.79037 1.19992 1.21040 1.19875 1.17813 0.81170 0.82815 0.82687 1.90654 1.38793 1.29521 1.84657 1.20879 1.02003 0.95174 0.98907 1.22649 0.94199 0.93205 0.92969 1.21766 0.99316 1.01507 0.96138 1.21693 0.94612 0.90366 0.91010 1.98374 1.77554 1.81061 1.44643 1.66717 1.23422 1.10100 1.20145 1.21056 0.90374 0.96487 0.87984 1.20731 1.02900 0.88665 1.03274 0.93528 0.92773 0.92726 0.91976 0.90215 0.90104 0.92838 0.91948 0.90911 0.93010 0.92274 0.93543 0.94754 0.92244 0.80322 0.83776 0.89825 0.90678 0.90331 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.15 9.45 37.16 0.35 -1.80 16 2 C -0.13 -2.02 4.64 -26.73 -0.12 -2.15 16 3 C 0.18 3.04 0.73 -131.82 -0.10 2.95 16 4 C -0.15 -2.45 6.98 37.15 0.26 -2.19 16 5 C -0.16 -2.61 8.32 37.16 0.31 -2.30 16 6 N -0.57 -10.93 1.50 -161.31 -0.24 -11.17 16 7 C 0.23 4.92 4.07 -5.20 -0.02 4.89 16 8 C -0.54 -12.41 5.86 -34.44 -0.20 -12.61 16 9 H 0.06 1.47 7.78 -52.49 -0.41 1.06 16 10 C 0.07 1.70 5.46 -17.82 -0.10 1.60 16 11 N -0.88 -22.29 13.29 55.43 0.74 -21.55 16 12 Si 0.89 18.86 29.54 -169.99 -5.02 13.84 16 13 H -0.27 -5.87 7.11 56.52 0.40 -5.47 16 14 H -0.28 -6.14 7.11 56.52 0.40 -5.74 16 15 H -0.27 -5.71 7.11 56.52 0.40 -5.31 16 16 C 0.57 11.05 5.09 -12.36 -0.06 10.98 16 17 O -0.56 -11.20 12.51 5.31 0.07 -11.13 16 18 C -0.16 -3.15 4.65 -104.82 -0.49 -3.63 16 19 C 0.00 -0.09 7.94 -38.88 -0.31 -0.40 16 20 C -0.17 -2.89 9.86 -39.46 -0.39 -3.28 16 21 C 0.19 3.25 7.27 -17.34 -0.13 3.12 16 22 Cl -0.04 -0.66 29.10 -51.86 -1.51 -2.17 16 23 N -0.49 -8.91 10.24 -6.28 -0.06 -8.98 16 24 C 0.18 3.23 6.82 -82.17 -0.56 2.67 16 25 C -0.10 -1.50 9.45 36.01 0.34 -1.16 16 26 H 0.05 0.59 8.14 -51.93 -0.42 0.17 16 27 H 0.05 0.88 6.92 -51.93 -0.36 0.52 16 28 H 0.05 0.78 6.58 -51.93 -0.34 0.44 16 29 H 0.06 0.82 8.14 -51.93 -0.42 0.40 16 30 H 0.08 1.32 6.39 -51.93 -0.33 0.99 16 31 H 0.08 1.49 7.13 -51.93 -0.37 1.12 16 32 H 0.05 0.73 8.14 -51.93 -0.42 0.31 16 33 H 0.06 1.04 5.39 -51.93 -0.28 0.76 16 34 H 0.07 1.29 6.33 -51.93 -0.33 0.96 16 35 H 0.05 0.73 8.14 -51.93 -0.42 0.30 16 36 H 0.06 1.05 8.14 -51.93 -0.42 0.62 16 37 H 0.05 1.05 5.74 -51.93 -0.30 0.76 16 38 H 0.03 0.81 6.12 -51.93 -0.32 0.49 16 39 H 0.27 6.58 8.31 -40.82 -0.34 6.24 16 40 H 0.18 3.63 5.24 -52.49 -0.28 3.35 16 41 H 0.14 2.21 8.06 -52.49 -0.42 1.79 16 42 H 0.08 1.20 8.14 -51.93 -0.42 0.78 16 43 H 0.07 1.02 8.14 -51.93 -0.42 0.60 16 44 H 0.08 1.22 6.45 -51.93 -0.34 0.89 16 LS Contribution 357.51 15.07 5.39 5.39 Total: -1.00 -25.03 357.51 -8.02 -33.06 By element: Atomic # 1 Polarization: 12.18 SS G_CDS: -6.16 Total: 6.02 kcal Atomic # 6 Polarization: -2.08 SS G_CDS: -1.22 Total: -3.30 kcal Atomic # 7 Polarization: -42.13 SS G_CDS: 0.43 Total: -41.70 kcal Atomic # 8 Polarization: -11.20 SS G_CDS: 0.07 Total: -11.13 kcal Atomic # 14 Polarization: 18.86 SS G_CDS: -5.02 Total: 13.84 kcal Atomic # 17 Polarization: -0.66 SS G_CDS: -1.51 Total: -2.17 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -25.03 -8.02 -33.06 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000189932527.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.586 kcal (2) G-P(sol) polarization free energy of solvation -25.032 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.447 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.024 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.057 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.471 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds