Wall clock time and date at job start Sat Apr 11 2020 01:23:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17401 * 1 3 3 C 1.47197 * 179.97438 * 2 1 4 4 N 1.46501 * 109.47426 * 261.48521 * 3 2 1 5 5 C 1.37096 * 120.00221 * 264.71601 * 4 3 2 6 6 H 1.07993 * 120.00228 * 144.30668 * 5 4 3 7 7 C 1.38952 * 119.99719 * 324.30722 * 5 4 3 8 8 N 1.31412 * 119.99647 * 157.75017 * 7 5 4 9 9 Si 1.86799 * 120.00365 * 337.75449 * 7 5 4 10 10 H 1.48496 * 109.47179 * 92.14291 * 9 7 5 11 11 H 1.48492 * 109.47037 * 212.14657 * 9 7 5 12 12 H 1.48501 * 109.47011 * 332.14458 * 9 7 5 13 13 C 1.34774 * 119.99685 * 84.71341 * 4 3 2 14 14 O 1.21296 * 120.00209 * 5.05950 * 13 4 3 15 15 C 1.50700 * 119.99819 * 185.05736 * 13 4 3 16 16 H 1.09005 * 109.47014 * 51.46743 * 15 13 4 17 17 C 1.52995 * 109.47194 * 291.45891 * 15 13 4 18 18 O 1.42907 * 109.47137 * 171.45992 * 15 13 4 19 19 C 1.35968 * 116.99980 * 207.58109 * 18 15 13 20 20 C 1.38677 * 120.03720 * 354.33518 * 19 18 15 21 21 C 1.38155 * 119.98193 * 180.23266 * 20 19 18 22 22 C 1.38467 * 120.05416 * 359.48963 * 21 20 19 23 23 F 1.35095 * 119.96696 * 180.23192 * 22 21 20 24 24 C 1.38433 * 120.06063 * 0.51083 * 22 21 20 25 25 C 1.38256 * 120.02483 * 359.74543 * 24 22 21 26 26 Cl 1.73600 * 120.02966 * 179.97438 * 25 24 22 27 27 H 4.40645 * 5.51507 * 179.97438 * 4 1 2 28 28 H 1.09004 * 109.47185 * 141.48893 * 3 2 1 29 29 H 1.08994 * 109.47175 * 21.48989 * 3 2 1 30 30 H 0.97001 * 119.99947 * 179.97438 * 8 7 5 31 31 H 1.09004 * 109.47101 * 177.54949 * 17 15 13 32 32 H 1.08995 * 109.47507 * 297.55362 * 17 15 13 33 33 H 1.09002 * 109.47137 * 57.56257 * 17 15 13 34 34 H 1.08002 * 120.00866 * 359.95521 * 20 19 18 35 35 H 1.08005 * 119.96948 * 179.74760 * 21 20 19 36 36 H 1.08010 * 119.98822 * 179.76704 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1343 0.2054 1.3660 5 6 3.4654 1.4650 1.7941 6 1 3.2699 1.7571 2.8152 7 6 4.0524 2.3659 0.9140 8 7 3.9765 3.6569 1.1476 9 14 4.9493 1.7421 -0.6011 10 1 4.0067 1.6883 -1.7473 11 1 6.0709 2.6597 -0.9252 12 1 5.4834 0.3822 -0.3353 13 6 3.2580 -0.8446 2.2018 14 8 3.0534 -1.9695 1.7969 15 6 3.6506 -0.6211 3.6395 16 1 2.9984 0.1323 4.0813 17 6 5.1016 -0.1402 3.7030 18 8 3.5226 -1.8461 4.3642 19 6 3.2667 -1.7513 5.6962 20 6 3.2581 -0.5102 6.3149 21 6 3.0027 -0.4158 7.6694 22 6 2.7450 -1.5584 8.4078 23 9 2.4909 -1.4635 9.7313 24 6 2.7531 -2.7983 7.7923 25 6 3.0135 -2.8967 6.4381 26 17 3.0244 -4.4517 5.6662 27 1 -1.0501 0.0002 0.0000 28 1 3.0090 0.8050 -0.6399 29 1 3.0097 -0.9553 -0.3765 30 1 4.3866 4.2858 0.5334 31 1 5.3720 0.0631 4.7393 32 1 5.7581 -0.9118 3.3009 33 1 5.2086 0.7709 3.1144 34 1 3.4553 0.3818 5.7389 35 1 3.0001 0.5506 8.1518 36 1 2.5556 -3.6892 8.3702 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000281616265.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 01:23:15 Heat of formation + Delta-G solvation = -19.540372 kcal Electronic energy + Delta-G solvation = -24919.764050 eV Core-core repulsion = 20926.667563 eV Total energy + Delta-G solvation = -3993.096487 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 325.067 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -48.94722 -40.43202 -39.03061 -37.23680 -36.30843 -35.30588 -32.95912 -32.10580 -31.41228 -30.86428 -29.20528 -26.96178 -25.33364 -24.01689 -23.12777 -22.10185 -19.39046 -18.79415 -18.34391 -17.47898 -17.35634 -16.40448 -16.13106 -15.79025 -15.52125 -15.22623 -14.87336 -14.55136 -14.35179 -14.31193 -13.66497 -13.46772 -13.30629 -13.06097 -12.90048 -12.51908 -12.40748 -12.24185 -11.71793 -11.58966 -11.31384 -11.15195 -10.98961 -10.90158 -10.76863 -10.58826 -10.34696 -9.92788 -9.55628 -9.35289 -9.13879 -8.75832 -8.18128 -8.05944 -6.71274 -4.31699 0.86681 1.03956 2.10847 2.84028 2.89285 3.05959 3.13394 3.30713 3.33759 3.43716 3.47333 3.91773 4.17753 4.39258 4.58942 4.65980 4.72215 4.91402 5.01099 5.19675 5.30854 5.42067 5.50965 5.54481 5.74578 5.89413 5.95246 5.96522 6.05160 6.15043 6.21927 6.44419 6.50229 6.73196 7.04029 7.37265 7.77518 7.94801 8.17331 8.67280 9.04326 9.36495 10.38147 Molecular weight = 325.07amu Principal moments of inertia in cm(-1) A = 0.015743 B = 0.003902 C = 0.003557 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1778.171178 B = 7173.216922 C = 7869.317260 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.222 4.222 2 C -0.168 4.168 3 C 0.201 3.799 4 N -0.456 5.456 5 C -0.357 4.357 6 H 0.108 0.892 7 C 0.072 3.928 8 N -0.847 5.847 9 Si 0.866 3.134 10 H -0.269 1.269 11 H -0.282 1.282 12 H -0.255 1.255 13 C 0.491 3.509 14 O -0.566 6.566 15 C 0.084 3.916 16 H 0.096 0.904 17 C -0.175 4.175 18 O -0.273 6.273 19 C 0.146 3.854 20 C -0.175 4.175 21 C -0.103 4.103 22 C 0.061 3.939 23 F -0.139 7.139 24 C -0.109 4.109 25 C -0.050 4.050 26 Cl -0.043 7.043 27 H 0.213 0.787 28 H 0.096 0.904 29 H 0.094 0.906 30 H 0.279 0.721 31 H 0.058 0.942 32 H 0.063 0.937 33 H 0.112 0.888 34 H 0.155 0.845 35 H 0.144 0.856 36 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.450 -5.892 9.117 10.864 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C -0.169 4.169 3 C 0.080 3.920 4 N -0.178 5.178 5 C -0.483 4.483 6 H 0.125 0.875 7 C -0.137 4.137 8 N -0.480 5.480 9 Si 0.692 3.308 10 H -0.196 1.196 11 H -0.208 1.208 12 H -0.179 1.179 13 C 0.279 3.721 14 O -0.448 6.448 15 C 0.025 3.975 16 H 0.113 0.887 17 C -0.232 4.232 18 O -0.185 6.185 19 C 0.098 3.902 20 C -0.193 4.193 21 C -0.122 4.122 22 C 0.041 3.959 23 F -0.117 7.117 24 C -0.128 4.128 25 C -0.077 4.077 26 Cl -0.014 7.014 27 H 0.230 0.770 28 H 0.113 0.887 29 H 0.112 0.888 30 H 0.089 0.911 31 H 0.077 0.923 32 H 0.082 0.918 33 H 0.131 0.869 34 H 0.172 0.828 35 H 0.162 0.838 36 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -0.447 -6.547 8.702 10.899 hybrid contribution 0.126 0.205 -0.557 0.606 sum -0.321 -6.341 8.146 10.328 Atomic orbital electron populations 1.24680 0.95644 1.03140 1.00596 1.23639 0.94819 0.98500 0.99937 1.18724 0.84076 1.02607 0.86611 1.43524 1.56967 1.07261 1.10079 1.19037 1.42098 0.86738 1.00476 0.87498 1.25269 0.95705 0.94662 0.98095 1.69756 1.39349 1.01064 1.37879 0.87147 0.80262 0.80562 0.82786 1.19648 1.20818 1.17854 1.19740 0.80695 0.84585 0.87108 1.90622 1.53793 1.22944 1.77393 1.22155 0.99714 0.84270 0.91335 0.88660 1.22347 0.93283 1.04588 1.02989 1.86304 1.83890 1.32959 1.15330 1.18833 0.94245 0.92287 0.84867 1.21300 1.05649 0.97250 0.95135 1.21040 0.99193 0.98234 0.93760 1.17259 1.06540 0.93766 0.78340 1.91493 1.92142 1.96949 1.31148 1.20748 1.01723 0.97722 0.92633 1.19836 1.09230 0.86627 0.92039 1.98388 1.96960 1.24993 1.81009 0.77017 0.88664 0.88773 0.91063 0.92268 0.91769 0.86915 0.82774 0.83842 0.83368 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.22 -4.08 19.25 29.55 0.57 -3.51 16 2 C -0.17 -3.54 13.62 -37.12 -0.51 -4.05 16 3 C 0.20 4.38 4.50 -6.83 -0.03 4.35 16 4 N -0.46 -10.35 2.19 -117.94 -0.26 -10.60 16 5 C -0.36 -8.31 7.17 -14.93 -0.11 -8.42 16 6 H 0.11 2.52 6.80 -52.49 -0.36 2.17 16 7 C 0.07 1.71 5.29 -17.47 -0.09 1.62 16 8 N -0.85 -21.22 13.96 55.50 0.77 -20.44 16 9 Si 0.87 18.37 25.08 -169.99 -4.26 14.10 16 10 H -0.27 -5.54 6.52 56.52 0.37 -5.17 16 11 H -0.28 -5.94 7.11 56.52 0.40 -5.54 16 12 H -0.25 -5.43 7.11 56.52 0.40 -5.02 16 13 C 0.49 11.04 6.99 -10.99 -0.08 10.96 16 14 O -0.57 -14.19 16.16 -14.22 -0.23 -14.42 16 15 C 0.08 1.57 1.84 -27.89 -0.05 1.52 16 16 H 0.10 1.67 5.37 -51.93 -0.28 1.39 16 17 C -0.17 -2.92 9.05 37.16 0.34 -2.58 16 18 O -0.27 -5.08 8.80 -39.40 -0.35 -5.43 16 19 C 0.15 2.28 6.62 -39.21 -0.26 2.02 16 20 C -0.17 -2.32 8.39 -39.45 -0.33 -2.65 16 21 C -0.10 -1.20 10.02 -39.53 -0.40 -1.60 16 22 C 0.06 0.73 7.30 -39.42 -0.29 0.44 16 23 F -0.14 -1.66 17.27 2.25 0.04 -1.62 16 24 C -0.11 -1.32 9.80 -39.50 -0.39 -1.71 16 25 C -0.05 -0.72 6.33 -39.37 -0.25 -0.96 16 26 Cl -0.04 -0.63 28.50 -51.86 -1.48 -2.10 16 27 H 0.21 2.90 7.80 -54.09 -0.42 2.48 16 28 H 0.10 2.05 3.19 -51.93 -0.17 1.89 16 29 H 0.09 1.97 7.52 -51.93 -0.39 1.58 16 30 H 0.28 6.55 8.31 -40.82 -0.34 6.22 16 31 H 0.06 0.82 7.17 -51.93 -0.37 0.45 16 32 H 0.06 1.08 8.14 -51.93 -0.42 0.66 16 33 H 0.11 2.05 5.89 -51.93 -0.31 1.74 16 34 H 0.15 1.94 5.49 -52.49 -0.29 1.65 16 35 H 0.14 1.32 8.06 -52.48 -0.42 0.90 16 36 H 0.15 1.47 8.06 -52.48 -0.42 1.05 16 LS Contribution 330.65 15.07 4.98 4.98 Total: -1.00 -28.01 330.65 -5.67 -33.67 By element: Atomic # 1 Polarization: 9.46 SS G_CDS: -3.02 Total: 6.44 kcal Atomic # 6 Polarization: -2.71 SS G_CDS: -1.87 Total: -4.57 kcal Atomic # 7 Polarization: -31.57 SS G_CDS: 0.52 Total: -31.05 kcal Atomic # 8 Polarization: -19.27 SS G_CDS: -0.58 Total: -19.85 kcal Atomic # 9 Polarization: -1.66 SS G_CDS: 0.04 Total: -1.62 kcal Atomic # 14 Polarization: 18.37 SS G_CDS: -4.26 Total: 14.10 kcal Atomic # 17 Polarization: -0.63 SS G_CDS: -1.48 Total: -2.10 kcal Total LS contribution 4.98 Total: 4.98 kcal Total: -28.01 -5.67 -33.67 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000281616265.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.133 kcal (2) G-P(sol) polarization free energy of solvation -28.007 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.875 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.666 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.673 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.540 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds