Wall clock time and date at job start Sat Apr 11 2020 01:36:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.34229 * 126.28268 * 2 1 4 4 H 0.97003 * 125.74152 * 359.97438 * 3 2 1 5 5 N 1.39933 * 108.52325 * 180.30206 * 3 2 1 6 6 C 1.30530 * 108.89335 * 359.73278 * 5 3 2 7 7 Cl 1.73595 * 126.00316 * 179.97438 * 6 5 3 8 8 C 1.38073 * 126.27945 * 179.85087 * 2 1 3 9 9 C 1.47382 * 126.42067 * 359.96785 * 8 2 1 10 10 O 1.21605 * 119.99540 * 269.71018 * 9 8 2 11 11 N 1.34769 * 120.00291 * 89.71168 * 9 8 2 12 12 C 1.46500 * 119.99931 * 179.97438 * 11 9 8 13 13 H 1.08994 * 109.52540 * 35.07633 * 12 11 9 14 14 C 1.53045 * 109.49979 * 155.16521 * 12 11 9 15 15 C 1.53034 * 109.53817 * 181.31796 * 14 12 11 16 16 C 1.53190 * 109.31105 * 298.62962 * 15 14 12 17 17 H 1.09007 * 109.70476 * 294.77843 * 16 15 14 18 18 C 1.53002 * 109.58753 * 174.42545 * 16 15 14 19 19 N 1.46920 * 108.77737 * 54.63787 * 16 15 14 20 20 C 1.36936 * 120.63115 * 126.40958 * 19 16 15 21 21 H 1.08004 * 120.00194 * 330.16138 * 20 19 16 22 22 C 1.38822 * 119.99855 * 150.15781 * 20 19 16 23 23 N 1.31620 * 119.99894 * 344.49212 * 22 20 19 24 24 Si 1.86801 * 119.99668 * 164.49152 * 22 20 19 25 25 H 1.48506 * 109.46773 * 90.00394 * 24 22 20 26 26 H 1.48501 * 109.46790 * 210.00013 * 24 22 20 27 27 H 1.48498 * 109.47308 * 330.00413 * 24 22 20 28 28 C 1.46925 * 118.74051 * 306.39056 * 19 16 15 29 29 H 1.09008 * 109.46749 * 270.15000 * 1 2 3 30 30 H 1.09002 * 109.46890 * 30.14756 * 1 2 3 31 31 H 1.08995 * 109.47404 * 150.14750 * 1 2 3 32 32 H 0.97002 * 120.00365 * 0.02562 * 11 9 8 33 33 H 1.09006 * 109.45536 * 301.33360 * 14 12 11 34 34 H 1.08998 * 109.45934 * 61.28784 * 14 12 11 35 35 H 1.09004 * 109.49845 * 178.68155 * 15 14 12 36 36 H 1.09000 * 109.50226 * 58.58361 * 15 14 12 37 37 H 1.09000 * 109.47123 * 300.71303 * 18 16 15 38 38 H 1.09007 * 109.47196 * 60.71051 * 18 16 15 39 39 H 1.08998 * 109.47588 * 180.70933 * 18 16 15 40 40 H 0.96997 * 119.99522 * 179.97438 * 23 22 20 41 41 H 1.09003 * 109.58752 * 173.39286 * 28 19 16 42 42 H 1.08993 * 109.58659 * 293.82223 * 28 19 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.3014 1.0820 0.0000 4 1 2.0020 2.0047 -0.0004 5 7 3.6340 0.6552 -0.0070 6 6 3.6598 -0.6498 -0.0054 7 17 5.0841 -1.6423 -0.0128 8 6 2.3240 -1.1131 0.0029 9 6 1.8858 -2.5202 0.0072 10 8 1.7105 -3.0991 1.0622 11 7 1.6792 -3.1653 -1.1579 12 6 1.2441 -4.5642 -1.1535 13 1 0.5769 -4.7355 -0.3089 14 6 0.5066 -4.8739 -2.4583 15 6 0.0231 -6.3257 -2.4407 16 6 1.2317 -7.2610 -2.3348 17 1 1.8424 -7.1756 -3.2337 18 6 0.7508 -8.7048 -2.1769 19 7 2.0266 -6.8755 -1.1609 20 6 2.3515 -7.7998 -0.2042 21 1 1.6926 -8.6341 -0.0134 22 6 3.5278 -7.6645 0.5205 23 7 4.4698 -6.8473 0.0996 24 14 3.7736 -8.6424 2.0931 25 1 4.4132 -9.9436 1.7719 26 1 4.6457 -7.8775 3.0203 27 1 2.4574 -8.8834 2.7370 28 6 2.4667 -5.4796 -1.0331 29 1 -0.3633 0.0027 1.0278 30 1 -0.3633 0.8887 -0.5161 31 1 -0.3634 -0.8912 -0.5115 32 1 1.8194 -2.7036 -1.9994 33 1 -0.3499 -4.2071 -2.5583 34 1 1.1820 -4.7261 -3.3010 35 1 -0.5223 -6.5388 -3.3601 36 1 -0.6328 -6.4805 -1.5839 37 1 0.1362 -8.7871 -1.2804 38 1 0.1613 -8.9889 -3.0488 39 1 1.6119 -9.3672 -2.0891 40 1 5.2915 -6.7525 0.6062 41 1 2.9388 -5.3327 -0.0616 42 1 3.1772 -5.2464 -1.8260 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001071557281.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 01:36:53 Heat of formation + Delta-G solvation = 47.844738 kcal Electronic energy + Delta-G solvation = -26332.228662 eV Core-core repulsion = 22568.214452 eV Total energy + Delta-G solvation = -3764.014209 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 326.125 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -41.60508 -39.11119 -37.43450 -36.72421 -34.28519 -32.87271 -32.74071 -31.62083 -30.33590 -29.74757 -27.70737 -25.92438 -24.90760 -22.69534 -22.10871 -22.01783 -20.42840 -19.70113 -19.10630 -17.90519 -16.41186 -16.34108 -15.78390 -15.27137 -15.22472 -14.87757 -14.35718 -13.92316 -13.74150 -13.48963 -13.36178 -13.32969 -13.20089 -12.65864 -12.57835 -12.33381 -11.93954 -11.83368 -11.69716 -11.39678 -11.06957 -10.84161 -10.73309 -10.63741 -10.45614 -10.35023 -10.20978 -9.92342 -9.77420 -9.53088 -9.38700 -9.38174 -8.83808 -8.46233 -8.34211 -6.52975 -5.66720 -3.11393 1.37504 1.48071 2.12520 2.75753 2.96628 3.46681 3.55077 3.56653 3.70283 4.32105 4.60192 4.61990 4.89873 5.13831 5.19807 5.39675 5.42297 5.50546 5.50854 5.55979 5.63100 5.72347 5.84136 6.02187 6.14901 6.31693 6.35641 6.43677 6.49912 6.55940 6.67423 6.79123 6.79792 7.00747 7.10067 7.13461 7.18087 7.39874 7.82892 7.92741 8.00195 8.57663 8.70132 9.32074 9.96413 10.52001 11.41235 Molecular weight = 326.13amu Principal moments of inertia in cm(-1) A = 0.012962 B = 0.004497 C = 0.003729 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2159.678466 B = 6225.181430 C = 7507.635807 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 C 0.136 3.864 3 N -0.452 5.452 4 H 0.446 0.554 5 N -0.281 5.281 6 C 0.159 3.841 7 Cl 0.033 6.967 8 C -0.261 4.261 9 C 0.591 3.409 10 O -0.519 6.519 11 N -0.710 5.710 12 C 0.116 3.884 13 H 0.083 0.917 14 C -0.116 4.116 15 C -0.126 4.126 16 C 0.165 3.835 17 H 0.024 0.976 18 C -0.136 4.136 19 N -0.583 5.583 20 C -0.254 4.254 21 H 0.069 0.931 22 C 0.008 3.992 23 N -0.897 5.897 24 Si 0.898 3.102 25 H -0.288 1.288 26 H -0.290 1.290 27 H -0.279 1.279 28 C 0.169 3.831 29 H 0.092 0.908 30 H 0.079 0.921 31 H 0.093 0.907 32 H 0.393 0.607 33 H 0.050 0.950 34 H 0.059 0.941 35 H 0.054 0.946 36 H 0.060 0.940 37 H 0.053 0.947 38 H 0.037 0.963 39 H 0.061 0.939 40 H 0.252 0.748 41 H 0.094 0.906 42 H 0.018 0.982 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.760 15.652 -5.584 18.785 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C 0.004 3.996 3 N -0.161 5.161 4 H 0.291 0.709 5 N -0.107 5.107 6 C -0.034 4.034 7 Cl 0.061 6.939 8 C -0.277 4.277 9 C 0.374 3.626 10 O -0.394 6.394 11 N -0.360 5.360 12 C 0.011 3.989 13 H 0.101 0.899 14 C -0.154 4.154 15 C -0.165 4.165 16 C 0.058 3.942 17 H 0.042 0.958 18 C -0.194 4.194 19 N -0.307 5.307 20 C -0.384 4.384 21 H 0.086 0.914 22 C -0.191 4.191 23 N -0.541 5.541 24 Si 0.727 3.273 25 H -0.215 1.215 26 H -0.216 1.216 27 H -0.204 1.204 28 C 0.042 3.958 29 H 0.110 0.890 30 H 0.098 0.902 31 H 0.112 0.888 32 H 0.226 0.774 33 H 0.069 0.931 34 H 0.077 0.923 35 H 0.072 0.928 36 H 0.079 0.921 37 H 0.072 0.928 38 H 0.056 0.944 39 H 0.080 0.920 40 H 0.062 0.938 41 H 0.112 0.888 42 H 0.036 0.964 Dipole moment (debyes) X Y Z Total from point charges -7.869 16.145 -4.727 18.572 hybrid contribution 0.021 -0.375 0.413 0.558 sum -7.848 15.770 -4.314 18.135 Atomic orbital electron populations 1.20599 0.85801 1.04650 1.04562 1.21387 0.94742 0.86053 0.97451 1.45802 1.03164 1.08455 1.58689 0.70856 1.77148 0.96344 1.10885 1.26318 1.22729 0.89540 0.90412 1.00692 1.98475 1.34705 1.64154 1.96541 1.19997 0.91145 0.94912 1.21598 1.17032 0.77362 0.83860 0.84337 1.90843 1.50088 1.67439 1.31036 1.46058 1.68683 1.13673 1.07553 1.22022 0.99681 0.79359 0.97809 0.89932 1.21675 0.98985 0.97380 0.97334 1.22041 0.99357 0.94546 1.00604 1.20482 0.90690 0.92291 0.90712 0.95817 1.21801 1.00788 0.97120 0.99657 1.44016 1.61444 1.04583 1.20616 1.19092 1.01285 1.06138 1.11877 0.91353 1.25072 0.95041 0.99013 0.99957 1.69999 1.06056 1.39824 1.38189 0.86378 0.77733 0.79266 0.83874 1.21545 1.21584 1.20434 1.21070 0.90474 0.81720 1.02548 0.88997 0.90174 0.88840 0.77446 0.93146 0.92275 0.92765 0.92077 0.92831 0.94441 0.91998 0.93758 0.88778 0.96439 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.69 10.25 36.01 0.37 -0.32 16 2 C 0.14 1.47 7.29 -81.60 -0.60 0.87 16 3 N -0.45 -4.39 7.28 33.86 0.25 -4.15 16 4 H 0.45 2.42 8.96 -182.72 -1.64 0.78 16 5 N -0.28 -3.86 12.64 33.17 0.42 -3.44 16 6 C 0.16 2.48 7.89 -16.91 -0.13 2.35 16 7 Cl 0.03 0.56 29.19 -51.86 -1.51 -0.96 16 8 C -0.26 -3.94 5.88 -105.04 -0.62 -4.55 16 9 C 0.59 10.69 7.14 -12.54 -0.09 10.60 16 10 O -0.52 -11.87 16.77 5.27 0.09 -11.78 16 11 N -0.71 -11.65 5.08 -54.78 -0.28 -11.93 16 12 C 0.12 2.23 2.60 -67.80 -0.18 2.05 16 13 H 0.08 1.78 7.58 -51.93 -0.39 1.39 16 14 C -0.12 -1.81 5.35 -26.69 -0.14 -1.96 16 15 C -0.13 -2.10 5.37 -26.62 -0.14 -2.24 16 16 C 0.16 3.36 3.50 -67.60 -0.24 3.12 16 17 H 0.02 0.51 8.14 -51.92 -0.42 0.08 16 18 C -0.14 -2.55 7.95 37.16 0.30 -2.26 16 19 N -0.58 -14.52 2.99 -164.77 -0.49 -15.01 16 20 C -0.25 -6.99 8.57 -15.06 -0.13 -7.12 16 21 H 0.07 1.83 6.24 -52.48 -0.33 1.50 16 22 C 0.01 0.24 4.94 -17.43 -0.09 0.15 16 23 N -0.90 -26.77 11.23 55.49 0.62 -26.15 16 24 Si 0.90 22.63 29.58 -169.99 -5.03 17.61 16 25 H -0.29 -7.16 7.11 56.52 0.40 -6.76 16 26 H -0.29 -7.46 7.11 56.52 0.40 -7.06 16 27 H -0.28 -6.92 7.11 56.52 0.40 -6.52 16 28 C 0.17 4.09 4.86 -3.71 -0.02 4.07 16 29 H 0.09 0.62 8.14 -51.92 -0.42 0.20 16 30 H 0.08 0.31 8.14 -51.93 -0.42 -0.12 16 31 H 0.09 0.72 7.96 -51.93 -0.41 0.31 16 32 H 0.39 5.27 8.59 -40.82 -0.35 4.92 16 33 H 0.05 0.66 8.14 -51.93 -0.42 0.24 16 34 H 0.06 0.89 8.14 -51.93 -0.42 0.47 16 35 H 0.05 0.76 8.14 -51.93 -0.42 0.34 16 36 H 0.06 1.06 8.14 -51.93 -0.42 0.64 16 37 H 0.05 1.02 7.44 -51.93 -0.39 0.63 16 38 H 0.04 0.57 8.14 -51.92 -0.42 0.15 16 39 H 0.06 1.26 7.63 -51.93 -0.40 0.86 16 40 H 0.25 7.39 8.31 -40.82 -0.34 7.05 16 41 H 0.09 2.71 6.15 -51.93 -0.32 2.39 16 42 H 0.02 0.45 8.14 -51.93 -0.42 0.02 16 LS Contribution 359.80 15.07 5.42 5.42 Total: -1.00 -34.70 359.80 -9.38 -44.08 By element: Atomic # 1 Polarization: 8.69 SS G_CDS: -7.16 Total: 1.53 kcal Atomic # 6 Polarization: 6.48 SS G_CDS: -1.70 Total: 4.78 kcal Atomic # 7 Polarization: -61.19 SS G_CDS: 0.52 Total: -60.67 kcal Atomic # 8 Polarization: -11.87 SS G_CDS: 0.09 Total: -11.78 kcal Atomic # 14 Polarization: 22.63 SS G_CDS: -5.03 Total: 17.61 kcal Atomic # 17 Polarization: 0.56 SS G_CDS: -1.51 Total: -0.96 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -34.70 -9.38 -44.08 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001071557281.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 91.920 kcal (2) G-P(sol) polarization free energy of solvation -34.696 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 57.225 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.380 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.076 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.845 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds