Wall clock time and date at job start Sat Apr 11 2020 01:37:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.31927 * 119.01989 * 2 1 4 4 C 1.32138 * 121.05702 * 179.97438 * 3 2 1 5 5 C 1.38993 * 119.12430 * 359.74624 * 4 3 2 6 6 Cl 1.73599 * 120.89004 * 180.25518 * 5 4 3 7 7 C 1.39636 * 118.22421 * 0.51531 * 5 4 3 8 8 C 1.48374 * 120.56085 * 179.76391 * 7 5 4 9 9 O 1.21489 * 119.99832 * 359.71972 * 8 7 5 10 10 N 1.34779 * 119.99597 * 179.71841 * 8 7 5 11 11 C 1.46496 * 119.99550 * 180.02562 * 10 8 7 12 12 H 1.09004 * 109.47509 * 324.99724 * 11 10 8 13 13 C 1.52999 * 109.47410 * 85.00095 * 11 10 8 14 14 C 1.52998 * 109.47164 * 205.00192 * 11 10 8 15 15 C 1.52998 * 109.47384 * 64.99625 * 14 11 10 16 16 H 1.09003 * 109.47082 * 305.00221 * 15 14 11 17 17 C 1.52995 * 109.47443 * 185.00170 * 15 14 11 18 18 N 1.46498 * 109.47009 * 65.00045 * 15 14 11 19 19 C 1.36935 * 120.00239 * 204.99963 * 18 15 14 20 20 H 1.08004 * 120.00069 * 0.02562 * 19 18 15 21 21 C 1.38811 * 120.00368 * 180.02562 * 19 18 15 22 22 N 1.31624 * 119.99540 * 359.72375 * 21 19 18 23 23 Si 1.86800 * 120.00451 * 180.02562 * 21 19 18 24 24 H 1.48501 * 109.47364 * 179.72253 * 23 21 19 25 25 H 1.48508 * 109.46883 * 299.72375 * 23 21 19 26 26 H 1.48497 * 109.46870 * 59.72186 * 23 21 19 27 27 N 1.31523 * 119.01459 * 180.02562 * 2 1 3 28 28 H 1.08998 * 109.47153 * 269.97934 * 1 2 3 29 29 H 1.09002 * 109.46923 * 29.97852 * 1 2 3 30 30 H 1.09002 * 109.47326 * 149.97950 * 1 2 3 31 31 H 1.07999 * 120.43621 * 180.02562 * 4 3 2 32 32 H 0.96994 * 120.00258 * 359.97438 * 10 8 7 33 33 H 1.09003 * 109.47191 * 299.99550 * 13 11 10 34 34 H 1.08996 * 109.47126 * 60.00048 * 13 11 10 35 35 H 1.09004 * 109.47346 * 179.97438 * 13 11 10 36 36 H 1.08997 * 109.46877 * 305.00014 * 14 11 10 37 37 H 1.08999 * 109.47306 * 185.00166 * 14 11 10 38 38 H 1.09004 * 109.47411 * 179.97438 * 17 15 14 39 39 H 1.08996 * 109.47329 * 300.00343 * 17 15 14 40 40 H 1.09003 * 109.46933 * 60.00266 * 17 15 14 41 41 H 0.97004 * 119.99747 * 25.00702 * 18 15 14 42 42 H 0.97000 * 120.00481 * 0.27542 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1470 1.1536 0.0000 4 6 3.4676 1.2006 0.0005 5 6 4.1868 0.0112 0.0064 6 17 5.9228 0.0195 0.0140 7 6 3.4757 -1.1905 0.0005 8 6 4.1911 -2.4904 0.0012 9 8 5.4058 -2.5152 0.0017 10 7 3.4934 -3.6435 0.0012 11 6 4.1997 -4.9269 0.0024 12 1 5.1129 -4.8397 -0.5865 13 6 4.5547 -5.3125 1.4398 14 6 3.3008 -6.0044 -0.6075 15 6 3.0476 -5.6830 -2.0817 16 1 2.6397 -4.6760 -2.1692 17 6 2.0501 -6.6892 -2.6591 18 7 4.3086 -5.7652 -2.8229 19 6 4.4675 -5.0575 -3.9844 20 1 3.6634 -4.4384 -4.3539 21 6 5.6621 -5.1358 -4.6870 22 7 6.6441 -5.8861 -4.2339 23 14 5.8792 -4.1698 -6.2711 24 1 7.2365 -4.4178 -6.8201 25 1 4.8587 -4.6034 -7.2590 26 1 5.7148 -2.7204 -5.9933 27 7 2.1450 -1.1502 -0.0005 28 1 -0.3633 -0.0004 1.0276 29 1 -0.3633 0.8902 -0.5135 30 1 -0.3634 -0.8898 -0.5142 31 1 3.9812 2.1506 0.0009 32 1 2.5237 -3.6236 0.0012 33 1 5.1952 -4.5449 1.8743 34 1 3.6416 -5.3998 2.0286 35 1 5.0798 -6.2677 1.4407 36 1 2.3512 -6.0304 -0.0731 37 1 3.7903 -6.9749 -0.5260 38 1 1.8694 -6.4599 -3.7093 39 1 2.4579 -7.6962 -2.5716 40 1 1.1119 -6.6279 -2.1076 41 1 5.0309 -6.3211 -2.4910 42 1 6.5316 -6.3874 -3.4112 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001135618233.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 01:37:59 Heat of formation + Delta-G solvation = 17.722788 kcal Electronic energy + Delta-G solvation = -25957.087865 eV Core-core repulsion = 22191.767470 eV Total energy + Delta-G solvation = -3765.320395 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 326.125 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -41.54772 -39.47146 -37.08217 -36.70147 -34.68926 -34.27041 -33.26228 -32.29128 -30.63940 -28.66420 -28.29297 -26.43038 -25.96125 -23.59336 -23.34458 -21.60443 -20.57075 -19.87501 -18.64794 -17.87662 -17.31600 -16.31225 -15.99755 -15.82501 -15.37750 -14.86661 -14.53917 -14.21941 -13.84168 -13.75169 -13.54998 -13.27903 -13.17955 -12.95509 -12.73722 -12.18521 -12.12078 -11.99374 -11.74658 -11.70461 -11.65210 -11.41936 -11.18974 -10.99911 -10.72855 -10.48625 -10.46014 -10.26224 -10.09064 -9.92032 -9.38794 -9.30001 -9.10321 -8.85766 -8.79347 -6.96051 -6.02085 -3.01337 0.13889 0.44829 1.81988 2.71981 2.96713 3.50043 3.51557 3.54612 3.58967 3.63635 3.75794 4.20184 4.39720 4.68301 4.72962 5.00363 5.09103 5.21382 5.31129 5.37336 5.42488 5.47623 5.59962 5.67566 5.81025 5.86361 5.89918 5.93716 6.06060 6.22384 6.26663 6.32934 6.37008 6.48216 6.57345 6.71615 6.85478 7.02378 7.49732 7.69028 7.86948 8.29401 8.83221 9.30288 10.16366 10.31092 11.46329 Molecular weight = 326.13amu Principal moments of inertia in cm(-1) A = 0.009958 B = 0.004502 C = 0.004054 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2811.065461 B = 6218.236347 C = 6904.568031 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 C 0.315 3.685 3 N -0.495 5.495 4 C 0.166 3.834 5 C -0.110 4.110 6 Cl 0.005 6.995 7 C 0.154 3.846 8 C 0.563 3.437 9 O -0.495 6.495 10 N -0.690 5.690 11 C 0.144 3.856 12 H 0.105 0.895 13 C -0.161 4.161 14 C -0.132 4.132 15 C 0.176 3.824 16 H 0.047 0.953 17 C -0.164 4.164 18 N -0.731 5.731 19 C -0.325 4.325 20 H 0.060 0.940 21 C -0.043 4.043 22 N -0.943 5.943 23 Si 1.075 2.925 24 H -0.285 1.285 25 H -0.296 1.296 26 H -0.297 1.297 27 N -0.481 5.481 28 H 0.089 0.911 29 H 0.089 0.911 30 H 0.091 0.909 31 H 0.184 0.816 32 H 0.405 0.595 33 H 0.057 0.943 34 H 0.052 0.948 35 H 0.066 0.934 36 H 0.064 0.936 37 H 0.076 0.924 38 H 0.052 0.948 39 H 0.044 0.956 40 H 0.035 0.965 41 H 0.366 0.634 42 H 0.254 0.746 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.685 10.851 13.766 21.066 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.048 3.952 3 N -0.210 5.210 4 C -0.003 4.003 5 C -0.142 4.142 6 Cl 0.034 6.966 7 C 0.005 3.995 8 C 0.344 3.656 9 O -0.368 6.368 10 N -0.342 5.342 11 C 0.040 3.960 12 H 0.123 0.877 13 C -0.219 4.219 14 C -0.171 4.171 15 C 0.066 3.934 16 H 0.065 0.935 17 C -0.224 4.224 18 N -0.374 5.374 19 C -0.456 4.456 20 H 0.078 0.922 21 C -0.241 4.241 22 N -0.589 5.589 23 Si 0.906 3.094 24 H -0.210 1.210 25 H -0.224 1.224 26 H -0.225 1.225 27 N -0.198 5.198 28 H 0.108 0.892 29 H 0.108 0.892 30 H 0.110 0.890 31 H 0.201 0.799 32 H 0.240 0.760 33 H 0.076 0.924 34 H 0.071 0.929 35 H 0.085 0.915 36 H 0.083 0.917 37 H 0.094 0.906 38 H 0.071 0.929 39 H 0.063 0.937 40 H 0.054 0.946 41 H 0.199 0.801 42 H 0.066 0.934 Dipole moment (debyes) X Y Z Total from point charges -10.704 11.252 12.421 19.886 hybrid contribution -0.366 -0.424 1.216 1.339 sum -11.071 10.828 13.637 20.634 Atomic orbital electron populations 1.20628 0.84666 1.04832 1.04223 1.23370 0.98612 0.82871 0.90346 1.68300 1.08993 1.30335 1.13389 1.23408 0.89201 0.97422 0.90255 1.22916 0.90289 0.95962 1.05080 1.98457 1.03752 1.98593 1.95811 1.21803 0.89474 0.94579 0.93625 1.17551 0.86804 0.82653 0.78568 1.90911 1.11982 1.86198 1.47674 1.45778 1.10555 1.05043 1.72777 1.21109 0.97452 0.81312 0.96131 0.87735 1.22188 1.01305 1.01886 0.96567 1.22190 0.99096 0.98220 0.97560 1.20164 0.88067 0.96666 0.88481 0.93467 1.22428 0.98229 1.00455 1.01310 1.42397 1.12125 1.56202 1.26718 1.19935 1.01319 1.23581 1.00739 0.92228 1.25637 0.92321 1.01772 1.04350 1.70875 1.33005 1.31364 1.23625 0.83317 0.75826 0.75056 0.75201 1.21002 1.22408 1.22466 1.68326 1.07549 1.30920 1.13043 0.89222 0.89186 0.89014 0.79865 0.75988 0.92374 0.92913 0.91523 0.91722 0.90555 0.92866 0.93664 0.94552 0.80113 0.93432 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.63 10.31 36.01 0.37 -0.26 16 2 C 0.31 3.61 7.64 -157.31 -1.20 2.41 16 3 N -0.50 -5.70 10.31 -10.70 -0.11 -5.81 16 4 C 0.17 1.83 11.14 -17.14 -0.19 1.64 16 5 C -0.11 -1.51 6.40 -38.78 -0.25 -1.76 16 6 Cl 0.00 0.07 26.25 -51.86 -1.36 -1.29 16 7 C 0.15 2.34 6.80 -82.61 -0.56 1.77 16 8 C 0.56 9.76 7.79 -12.09 -0.09 9.66 16 9 O -0.50 -10.02 13.81 5.38 0.07 -9.95 16 10 N -0.69 -10.72 4.44 -54.58 -0.24 -10.96 16 11 C 0.14 2.32 2.52 -67.93 -0.17 2.14 16 12 H 0.10 2.17 7.05 -51.93 -0.37 1.81 16 13 C -0.16 -2.17 9.48 37.16 0.35 -1.81 16 14 C -0.13 -2.01 4.29 -26.73 -0.11 -2.13 16 15 C 0.18 3.40 2.84 -67.93 -0.19 3.21 16 16 H 0.05 0.96 7.56 -51.93 -0.39 0.57 16 17 C -0.16 -2.92 9.49 37.16 0.35 -2.57 16 18 N -0.73 -17.99 4.49 -53.43 -0.24 -18.23 16 19 C -0.32 -9.20 9.93 -15.06 -0.15 -9.35 16 20 H 0.06 1.70 7.83 -52.48 -0.41 1.29 16 21 C -0.04 -1.28 5.50 -17.43 -0.10 -1.37 16 22 N -0.94 -29.66 13.70 55.49 0.76 -28.90 16 23 Si 1.07 26.94 29.92 -169.99 -5.09 21.85 16 24 H -0.28 -7.23 7.11 56.52 0.40 -6.82 16 25 H -0.30 -7.06 7.11 56.52 0.40 -6.66 16 26 H -0.30 -7.24 7.11 56.52 0.40 -6.84 16 27 N -0.48 -6.40 9.59 -7.31 -0.07 -6.47 16 28 H 0.09 0.52 8.14 -51.93 -0.42 0.09 16 29 H 0.09 0.57 8.14 -51.93 -0.42 0.15 16 30 H 0.09 0.63 8.14 -51.93 -0.42 0.21 16 31 H 0.18 1.37 8.06 -52.49 -0.42 0.95 16 32 H 0.40 5.51 7.99 -40.82 -0.33 5.18 16 33 H 0.06 0.84 8.14 -51.93 -0.42 0.42 16 34 H 0.05 0.61 8.14 -51.93 -0.42 0.18 16 35 H 0.07 0.83 8.14 -51.93 -0.42 0.41 16 36 H 0.06 0.81 8.14 -51.93 -0.42 0.39 16 37 H 0.08 1.15 8.14 -51.93 -0.42 0.72 16 38 H 0.05 1.05 8.14 -51.93 -0.42 0.63 16 39 H 0.04 0.80 8.14 -51.93 -0.42 0.38 16 40 H 0.04 0.53 8.14 -51.93 -0.42 0.11 16 41 H 0.37 9.35 6.63 -40.82 -0.27 9.08 16 42 H 0.25 7.86 6.77 -40.82 -0.28 7.58 16 LS Contribution 369.41 15.07 5.57 5.57 Total: -1.00 -34.22 369.41 -8.56 -42.78 By element: Atomic # 1 Polarization: 15.73 SS G_CDS: -5.91 Total: 9.81 kcal Atomic # 6 Polarization: 3.53 SS G_CDS: -1.94 Total: 1.59 kcal Atomic # 7 Polarization: -70.47 SS G_CDS: 0.10 Total: -70.37 kcal Atomic # 8 Polarization: -10.02 SS G_CDS: 0.07 Total: -9.95 kcal Atomic # 14 Polarization: 26.94 SS G_CDS: -5.09 Total: 21.85 kcal Atomic # 17 Polarization: 0.07 SS G_CDS: -1.36 Total: -1.29 kcal Total LS contribution 5.57 Total: 5.57 kcal Total: -34.22 -8.56 -42.78 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001135618233.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.507 kcal (2) G-P(sol) polarization free energy of solvation -34.220 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.287 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.564 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.784 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.723 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds