Wall clock time and date at job start Sat Apr 11 2020 01:38:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 N 1.46502 * 109.46611 * 2 1 4 4 N 1.28432 * 125.18805 * 275.29890 * 3 2 1 5 5 C 1.30837 * 110.98101 * 180.26318 * 4 3 2 6 6 C 1.39808 * 107.87631 * 359.73369 * 5 4 3 7 7 Cl 1.73603 * 127.33549 * 180.02562 * 6 5 4 8 8 C 1.36750 * 125.18830 * 95.10733 * 3 2 1 9 9 C 1.47037 * 126.90293 * 0.02562 * 8 3 2 10 10 O 1.21639 * 119.99891 * 266.96166 * 9 8 3 11 11 N 1.34773 * 120.00062 * 86.96420 * 9 8 3 12 12 C 1.46500 * 119.99989 * 174.79781 * 11 9 8 13 13 C 1.53043 * 109.45819 * 275.06626 * 12 11 9 14 14 C 1.53192 * 109.31319 * 178.61562 * 13 12 11 15 15 N 1.46932 * 108.77596 * 54.63468 * 14 13 12 16 16 C 1.36933 * 120.62963 * 126.41597 * 15 14 13 17 17 H 1.07994 * 120.00179 * 327.79175 * 16 15 14 18 18 C 1.38814 * 119.99751 * 147.79720 * 16 15 14 19 19 N 1.31623 * 119.99582 * 167.74553 * 18 16 15 20 20 Si 1.86797 * 119.99999 * 347.74090 * 18 16 15 21 21 H 1.48503 * 109.47231 * 85.85098 * 20 18 16 22 22 H 1.48500 * 109.46780 * 205.84684 * 20 18 16 23 23 H 1.48500 * 109.47335 * 325.84648 * 20 18 16 24 24 C 1.46929 * 118.73474 * 306.39224 * 15 14 13 25 25 C 1.53038 * 109.45860 * 155.00043 * 12 11 9 26 26 H 1.08996 * 109.47266 * 299.99985 * 1 2 3 27 27 H 1.09002 * 109.47200 * 60.00601 * 1 2 3 28 28 H 1.09001 * 109.46977 * 179.97438 * 1 2 3 29 29 H 1.08996 * 109.47266 * 240.00015 * 2 1 3 30 30 H 1.09002 * 109.47200 * 119.99399 * 2 1 3 31 31 H 1.08003 * 126.06004 * 179.75788 * 5 4 3 32 32 H 0.97003 * 119.99852 * 354.79730 * 11 9 8 33 33 H 1.08991 * 109.44871 * 35.02983 * 12 11 9 34 34 H 1.09008 * 109.49755 * 298.56617 * 13 12 11 35 35 H 1.08993 * 109.49678 * 58.66437 * 13 12 11 36 36 H 1.09006 * 109.58257 * 294.84862 * 14 13 12 37 37 H 1.08992 * 109.70538 * 174.49262 * 14 13 12 38 38 H 0.97003 * 119.99375 * 180.02562 * 19 18 16 39 39 H 1.08998 * 109.58940 * 293.81857 * 24 15 14 40 40 H 1.09000 * 109.69732 * 173.46490 * 24 15 14 41 41 H 1.09004 * 109.49917 * 301.33266 * 25 12 11 42 42 H 1.08996 * 109.50256 * 61.43532 * 25 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0182 1.3813 0.0000 4 7 2.1735 2.1114 -1.0451 5 6 2.6294 3.2955 -0.7259 6 6 2.7787 3.3376 0.6635 7 17 3.3483 4.6687 1.6213 8 6 2.3747 2.0911 1.1132 9 6 2.3419 1.6231 2.5067 10 8 1.3595 1.8280 3.1941 11 7 3.4004 0.9673 3.0224 12 6 3.4153 0.6015 4.4409 13 6 3.9292 1.7831 5.2667 14 6 3.9108 1.4091 6.7522 15 7 4.6736 0.1669 6.9366 16 6 5.6937 0.1035 7.8478 17 1 6.2902 0.9801 8.0525 18 6 5.9613 -1.0878 8.5082 19 7 7.0758 -1.2235 9.1951 20 14 4.7395 -2.4982 8.4222 21 1 4.9978 -3.3032 7.2014 22 1 4.8909 -3.3581 9.6234 23 1 3.3584 -1.9545 8.3737 24 6 4.3204 -1.0059 6.1251 25 6 4.3343 -0.6048 4.6466 26 1 -0.3633 0.5138 0.8899 27 1 -0.3634 0.5137 -0.8901 28 1 -0.3633 -1.0277 -0.0005 29 1 1.8934 -0.5138 -0.8899 30 1 1.8934 -0.5137 0.8901 31 1 2.8507 4.0982 -1.4138 32 1 4.1523 0.7375 2.4542 33 1 2.4049 0.3471 4.7607 34 1 4.9488 2.0223 4.9643 35 1 3.2877 2.6487 5.1015 36 1 2.8817 1.2579 7.0781 37 1 4.3659 2.2077 7.3378 38 1 7.2629 -2.0561 9.6563 39 1 3.3248 -1.3541 6.3999 40 1 5.0456 -1.8018 6.2946 41 1 3.9811 -1.4389 4.0401 42 1 5.3500 -0.3432 4.3502 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000598683323.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 01:38:38 Heat of formation + Delta-G solvation = 61.077849 kcal Electronic energy + Delta-G solvation = -25917.355126 eV Core-core repulsion = 22153.914747 eV Total energy + Delta-G solvation = -3763.440379 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 326.125 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -42.94564 -39.82148 -37.69949 -36.82198 -34.94685 -34.73738 -32.39746 -31.26669 -30.51565 -30.18085 -29.86373 -25.43313 -24.53784 -23.42439 -22.89615 -22.02085 -21.57101 -20.26087 -19.67534 -18.39721 -16.99065 -16.65993 -16.37752 -15.93828 -15.65424 -15.17148 -14.71824 -14.56534 -14.22452 -14.15658 -13.94929 -13.73636 -13.29685 -13.13348 -12.99837 -12.59154 -12.44476 -12.13276 -12.10670 -11.95340 -11.86623 -11.78858 -11.09444 -10.94132 -10.77560 -10.62639 -10.44365 -10.33685 -10.11098 -9.77545 -9.62541 -9.54544 -9.05281 -9.03872 -8.68323 -6.97520 -5.97463 -3.41931 1.16690 1.47991 2.08184 2.15839 2.50113 2.99889 3.24130 3.43386 3.45742 4.03576 4.28286 4.42622 4.47083 4.56291 4.67216 4.87131 4.91213 4.99703 5.07660 5.14079 5.22842 5.29641 5.33973 5.54779 5.63200 5.74053 5.83324 5.91910 5.95647 6.06913 6.21449 6.24209 6.30605 6.48586 6.53104 6.57517 6.63162 6.84876 7.29098 7.56290 7.91540 7.96672 8.31206 8.89493 9.66673 10.05184 11.18662 Molecular weight = 326.13amu Principal moments of inertia in cm(-1) A = 0.018942 B = 0.003321 C = 0.002987 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1477.847752 B = 8429.141168 C = 9372.742654 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C 0.115 3.885 3 N -0.263 5.263 4 N -0.271 5.271 5 C 0.023 3.977 6 C -0.116 4.116 7 Cl -0.017 7.017 8 C -0.008 4.008 9 C 0.588 3.412 10 O -0.512 6.512 11 N -0.707 5.707 12 C 0.149 3.851 13 C -0.142 4.142 14 C 0.151 3.849 15 N -0.607 5.607 16 C -0.261 4.261 17 H 0.086 0.914 18 C 0.023 3.977 19 N -0.914 5.914 20 Si 0.894 3.106 21 H -0.287 1.287 22 H -0.304 1.304 23 H -0.270 1.270 24 C 0.124 3.876 25 C -0.140 4.140 26 H 0.069 0.931 27 H 0.070 0.930 28 H 0.085 0.915 29 H 0.109 0.891 30 H 0.101 0.899 31 H 0.195 0.805 32 H 0.400 0.600 33 H 0.088 0.912 34 H 0.066 0.934 35 H 0.060 0.940 36 H 0.026 0.974 37 H 0.068 0.932 38 H 0.263 0.737 39 H 0.029 0.971 40 H 0.080 0.920 41 H 0.059 0.941 42 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.054 4.302 -21.771 24.364 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C -0.004 4.004 3 N -0.052 5.052 4 N -0.101 5.101 5 C -0.156 4.156 6 C -0.154 4.154 7 Cl 0.012 6.988 8 C -0.139 4.139 9 C 0.370 3.630 10 O -0.386 6.386 11 N -0.357 5.357 12 C 0.047 3.953 13 C -0.183 4.183 14 C 0.025 3.975 15 N -0.331 5.331 16 C -0.390 4.390 17 H 0.103 0.897 18 C -0.176 4.176 19 N -0.557 5.557 20 Si 0.725 3.275 21 H -0.215 1.215 22 H -0.232 1.232 23 H -0.195 1.195 24 C -0.003 4.003 25 C -0.180 4.180 26 H 0.088 0.912 27 H 0.089 0.911 28 H 0.103 0.897 29 H 0.127 0.873 30 H 0.119 0.881 31 H 0.212 0.788 32 H 0.235 0.765 33 H 0.106 0.894 34 H 0.084 0.916 35 H 0.079 0.921 36 H 0.044 0.956 37 H 0.086 0.914 38 H 0.073 0.927 39 H 0.047 0.953 40 H 0.097 0.903 41 H 0.078 0.922 42 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -10.992 3.644 -21.927 24.797 hybrid contribution 0.132 -0.268 0.360 0.468 sum -10.860 3.376 -21.567 24.382 Atomic orbital electron populations 1.22188 0.92867 1.03956 1.03986 1.22135 0.96712 0.75969 1.05596 1.45771 1.45390 1.12288 1.01753 1.73215 1.19194 1.04229 1.13501 1.23523 1.03559 0.95706 0.92763 1.21270 1.10755 0.90646 0.92715 1.98375 1.87141 1.42791 1.70497 1.21392 1.08822 0.93687 0.89966 1.16861 0.83712 0.78498 0.83954 1.90876 1.32474 1.54888 1.60336 1.46312 1.20121 1.56911 1.12352 1.21145 1.00923 0.95567 0.77713 1.22408 1.01151 0.96748 0.97949 1.20907 0.94859 0.89547 0.92192 1.44372 1.38031 1.07854 1.42841 1.18932 1.06180 0.99060 1.14784 0.89682 1.25410 0.97095 0.98328 0.96719 1.69763 1.23758 1.26493 1.35648 0.86875 0.82830 0.82225 0.75588 1.21480 1.23225 1.19536 1.21430 0.98933 0.91703 0.88185 1.22356 0.99568 0.95932 1.00118 0.91165 0.91142 0.89673 0.87327 0.88074 0.78834 0.76538 0.89428 0.91554 0.92127 0.95603 0.91373 0.92680 0.95324 0.90255 0.92233 0.90972 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.20 10.24 37.16 0.38 -0.82 16 2 C 0.12 0.84 6.91 -4.04 -0.03 0.81 16 3 N -0.26 -2.73 3.35 -57.11 -0.19 -2.92 16 4 N -0.27 -2.90 11.89 30.61 0.36 -2.53 16 5 C 0.02 0.23 12.04 -17.39 -0.21 0.02 16 6 C -0.12 -1.36 6.89 -38.88 -0.27 -1.62 16 7 Cl -0.02 -0.19 29.24 -51.86 -1.52 -1.71 16 8 C -0.01 -0.10 6.72 -82.00 -0.55 -0.65 16 9 C 0.59 8.06 6.88 -12.70 -0.09 7.98 16 10 O -0.51 -8.80 16.74 5.24 0.09 -8.71 16 11 N -0.71 -8.81 5.07 -54.97 -0.28 -9.09 16 12 C 0.15 2.25 2.46 -67.89 -0.17 2.08 16 13 C -0.14 -2.35 5.65 -26.61 -0.15 -2.50 16 14 C 0.15 2.96 6.52 -3.71 -0.02 2.94 16 15 N -0.61 -13.93 2.74 -172.31 -0.47 -14.41 16 16 C -0.26 -7.14 10.06 -15.06 -0.15 -7.29 16 17 H 0.09 2.50 8.06 -52.49 -0.42 2.08 16 18 C 0.02 0.66 5.35 -17.43 -0.09 0.57 16 19 N -0.91 -27.63 13.97 55.49 0.78 -26.86 16 20 Si 0.89 21.95 24.24 -169.99 -4.12 17.83 16 21 H -0.29 -6.64 6.41 56.52 0.36 -6.28 16 22 H -0.30 -7.65 7.11 56.52 0.40 -7.25 16 23 H -0.27 -6.54 6.58 56.52 0.37 -6.17 16 24 C 0.12 2.53 4.15 -3.71 -0.02 2.51 16 25 C -0.14 -2.19 5.55 -26.61 -0.15 -2.34 16 26 H 0.07 0.64 8.14 -51.93 -0.42 0.22 16 27 H 0.07 0.51 8.14 -51.93 -0.42 0.08 16 28 H 0.08 0.41 8.14 -51.93 -0.42 -0.01 16 29 H 0.11 0.57 8.14 -51.93 -0.42 0.15 16 30 H 0.10 0.68 7.65 -51.93 -0.40 0.28 16 31 H 0.19 1.31 8.06 -52.48 -0.42 0.89 16 32 H 0.40 4.12 8.59 -40.82 -0.35 3.77 16 33 H 0.09 1.44 7.51 -51.93 -0.39 1.05 16 34 H 0.07 1.11 8.14 -51.92 -0.42 0.69 16 35 H 0.06 0.98 8.14 -51.93 -0.42 0.56 16 36 H 0.03 0.50 8.14 -51.93 -0.42 0.08 16 37 H 0.07 1.34 7.93 -51.93 -0.41 0.93 16 38 H 0.26 7.57 8.31 -40.82 -0.34 7.23 16 39 H 0.03 0.59 6.91 -51.93 -0.36 0.23 16 40 H 0.08 1.77 4.39 -51.93 -0.23 1.54 16 41 H 0.06 0.78 8.14 -51.93 -0.42 0.36 16 42 H 0.07 1.14 8.14 -51.93 -0.42 0.72 16 LS Contribution 357.42 15.07 5.39 5.39 Total: -1.00 -32.71 357.42 -7.47 -40.18 By element: Atomic # 1 Polarization: 7.14 SS G_CDS: -5.99 Total: 1.15 kcal Atomic # 6 Polarization: 3.20 SS G_CDS: -1.51 Total: 1.69 kcal Atomic # 7 Polarization: -56.01 SS G_CDS: 0.20 Total: -55.81 kcal Atomic # 8 Polarization: -8.80 SS G_CDS: 0.09 Total: -8.71 kcal Atomic # 14 Polarization: 21.95 SS G_CDS: -4.12 Total: 17.83 kcal Atomic # 17 Polarization: -0.19 SS G_CDS: -1.52 Total: -1.71 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -32.71 -7.47 -40.18 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000598683323.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 101.259 kcal (2) G-P(sol) polarization free energy of solvation -32.713 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 68.546 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.469 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.182 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.078 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds