Wall clock time and date at job start Sat Apr 11 2020 02:26:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 H 1.09003 * 109.46934 * 2 1 4 4 N 1.46496 * 109.47105 * 119.99944 * 2 1 3 5 5 C 1.34782 * 119.99998 * 275.00157 * 4 2 1 6 6 O 1.21557 * 120.00018 * 359.97438 * 5 4 2 7 7 C 1.47776 * 119.99985 * 180.02562 * 5 4 2 8 8 C 1.39629 * 120.14751 * 359.97398 * 7 5 4 9 9 C 1.37903 * 119.89200 * 180.02562 * 8 7 5 10 10 C 1.38407 * 120.19471 * 359.97438 * 9 8 7 11 11 C 1.38372 * 120.30182 * 359.97438 * 10 9 8 12 12 Cl 1.73603 * 119.94759 * 180.02562 * 11 10 9 13 13 C 1.38275 * 120.10783 * 0.02562 * 11 10 9 14 14 Cl 1.73603 * 120.10060 * 179.70350 * 13 11 10 15 15 C 1.50696 * 109.47208 * 240.00008 * 2 1 3 16 16 O 1.21296 * 120.00217 * 240.00033 * 15 2 1 17 17 N 1.34778 * 119.99827 * 59.99608 * 15 2 1 18 18 C 1.37104 * 119.99864 * 179.97438 * 17 15 2 19 19 H 1.07997 * 119.99933 * 0.02562 * 18 17 15 20 20 C 1.38944 * 119.99848 * 180.02562 * 18 17 15 21 21 N 1.31414 * 119.99938 * 179.97438 * 20 18 17 22 22 Si 1.86801 * 120.00424 * 0.02562 * 20 18 17 23 23 H 1.48506 * 109.47111 * 89.99735 * 22 20 18 24 24 H 1.48498 * 109.47554 * 209.99866 * 22 20 18 25 25 H 1.48503 * 109.46771 * 329.99912 * 22 20 18 26 26 H 1.09003 * 109.46934 * 180.02562 * 1 2 3 27 27 H 1.08995 * 109.46815 * 299.99882 * 1 2 3 28 28 H 1.08994 * 109.47009 * 59.99957 * 1 2 3 29 29 H 0.97001 * 120.00423 * 95.00101 * 4 2 1 30 30 H 1.08005 * 120.05962 * 0.04233 * 8 7 5 31 31 H 1.07999 * 119.90325 * 179.97438 * 9 8 7 32 32 H 1.07996 * 119.84944 * 180.02562 * 10 9 8 33 33 H 0.96997 * 120.00068 * 0.02562 * 17 15 2 34 34 H 0.97004 * 120.00296 * 180.02562 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 7 2.0184 -0.6906 1.1961 5 6 2.1471 -0.0182 2.3572 6 8 1.8584 1.1613 2.4116 7 6 2.6402 -0.7147 3.5636 8 6 2.9732 -2.0694 3.5044 9 6 3.4323 -2.7142 4.6336 10 6 3.5645 -2.0224 5.8250 11 6 3.2379 -0.6795 5.8925 12 17 3.4078 0.1795 7.3916 13 6 2.7763 -0.0205 4.7680 14 17 2.3592 1.6624 4.8548 15 6 2.0324 -0.7104 -1.2304 16 8 2.7297 -1.6966 -1.1192 17 7 1.7067 -0.2499 -2.4545 18 6 2.1642 -0.8959 -3.5740 19 1 2.7851 -1.7740 -3.4749 20 6 1.8289 -0.4209 -4.8359 21 7 2.2678 -1.0398 -5.9089 22 14 0.7554 1.0982 -5.0074 23 1 1.6144 2.3088 -5.0524 24 1 -0.0363 1.0061 -6.2603 25 1 -0.1652 1.1874 -3.8456 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8899 29 1 2.2491 -1.6317 1.1527 30 1 2.8716 -2.6114 2.5757 31 1 3.6896 -3.7622 4.5881 32 1 3.9250 -2.5328 6.7058 33 1 1.1493 0.5389 -2.5435 34 1 2.0340 -0.7080 -6.7900 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000339923563.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 02:26:12 Heat of formation + Delta-G solvation = -48.351353 kcal Electronic energy + Delta-G solvation = -22752.697382 eV Core-core repulsion = 18930.805970 eV Total energy + Delta-G solvation = -3821.891412 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 330.032 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -40.52260 -39.16803 -38.15970 -36.82302 -36.59864 -34.84813 -34.04420 -32.25989 -31.70041 -31.03103 -29.88200 -25.47952 -24.77324 -23.30652 -22.76750 -20.55249 -19.60697 -19.01797 -18.14434 -16.86359 -16.44710 -15.87334 -15.65902 -15.36774 -15.00419 -14.86250 -14.56138 -14.31770 -14.02829 -13.76156 -13.24261 -12.90803 -12.51785 -12.32949 -12.30255 -12.21932 -12.01990 -11.96466 -11.70358 -11.56494 -11.36838 -11.21124 -11.05361 -10.66084 -10.08249 -9.72116 -9.60866 -9.41908 -9.11936 -9.04152 -8.63199 -8.32744 -6.43293 -3.95784 0.29773 0.57699 1.52959 1.96526 2.56813 2.96416 3.01180 3.05325 3.11002 3.38389 3.54223 4.00985 4.25373 4.37159 4.46349 4.56015 4.74601 4.85553 5.08542 5.10133 5.36389 5.45803 5.48267 5.55523 5.60114 5.78105 5.85779 6.00758 6.08081 6.32302 6.49958 7.41086 7.57953 7.97585 8.20818 8.42858 8.79204 9.27326 9.60826 10.68850 Molecular weight = 330.03amu Principal moments of inertia in cm(-1) A = 0.027215 B = 0.002738 C = 0.002551 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1028.580575 B =10225.334942 C =10975.403796 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C 0.131 3.869 3 H 0.104 0.896 4 N -0.695 5.695 5 C 0.554 3.446 6 O -0.518 6.518 7 C -0.112 4.112 8 C -0.068 4.068 9 C -0.111 4.111 10 C -0.078 4.078 11 C -0.045 4.045 12 Cl -0.047 7.047 13 C 0.016 3.984 14 Cl -0.010 7.010 15 C 0.442 3.558 16 O -0.578 6.578 17 N -0.574 5.574 18 C -0.310 4.310 19 H 0.122 0.878 20 C 0.046 3.954 21 N -0.874 5.874 22 Si 0.877 3.123 23 H -0.268 1.268 24 H -0.274 1.274 25 H -0.267 1.267 26 H 0.063 0.937 27 H 0.066 0.934 28 H 0.069 0.931 29 H 0.408 0.592 30 H 0.147 0.853 31 H 0.146 0.854 32 H 0.146 0.854 33 H 0.374 0.626 34 H 0.276 0.724 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.994 -0.021 23.580 23.601 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.217 4.217 2 C 0.022 3.978 3 H 0.122 0.878 4 N -0.349 5.349 5 C 0.339 3.661 6 O -0.395 6.395 7 C -0.116 4.116 8 C -0.087 4.087 9 C -0.129 4.129 10 C -0.097 4.097 11 C -0.073 4.073 12 Cl -0.018 7.018 13 C -0.013 4.013 14 Cl 0.020 6.980 15 C 0.227 3.773 16 O -0.462 6.462 17 N -0.211 5.211 18 C -0.438 4.438 19 H 0.139 0.861 20 C -0.158 4.158 21 N -0.513 5.513 22 Si 0.703 3.297 23 H -0.193 1.193 24 H -0.199 1.199 25 H -0.192 1.192 26 H 0.082 0.918 27 H 0.085 0.915 28 H 0.088 0.912 29 H 0.246 0.754 30 H 0.165 0.835 31 H 0.164 0.836 32 H 0.164 0.836 33 H 0.207 0.793 34 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -0.752 0.394 23.531 23.547 hybrid contribution -0.683 0.867 -0.288 1.141 sum -1.435 1.261 23.244 23.322 Atomic orbital electron populations 1.22131 0.93740 1.02933 1.02848 1.20720 0.94922 0.97759 0.84365 0.87802 1.45597 1.66159 1.14847 1.08252 1.17882 0.78744 0.86663 0.82809 1.90863 1.49398 1.14633 1.84558 1.19787 1.04200 0.94386 0.93246 1.21581 0.94775 0.92510 0.99804 1.21200 0.99144 1.01022 0.91527 1.21249 0.97634 0.91308 0.99485 1.20704 1.05463 0.93496 0.87617 1.98396 1.96144 1.76831 1.30406 1.20851 0.99371 0.88512 0.92590 1.98439 1.90725 1.10686 1.98162 1.19607 0.86113 0.87592 0.83958 1.90538 1.41762 1.28094 1.85855 1.42137 1.46135 1.27236 1.05642 1.19437 1.30291 1.12164 0.81919 0.86070 1.25058 0.97635 0.98084 0.95071 1.69616 1.43946 1.39642 0.98063 0.86702 0.80869 0.83290 0.78820 1.19344 1.19945 1.19234 0.91782 0.91515 0.91171 0.75376 0.83542 0.83577 0.83631 0.79294 0.91367 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.29 9.38 37.16 0.35 -1.94 16 2 C 0.13 2.20 2.98 -69.08 -0.21 2.00 16 3 H 0.10 1.75 7.58 -51.93 -0.39 1.36 16 4 N -0.70 -10.54 4.90 -55.90 -0.27 -10.82 16 5 C 0.55 8.30 7.73 -12.36 -0.10 8.20 16 6 O -0.52 -8.92 13.63 5.32 0.07 -8.84 16 7 C -0.11 -1.39 5.88 -104.94 -0.62 -2.00 16 8 C -0.07 -0.64 9.54 -39.19 -0.37 -1.02 16 9 C -0.11 -0.80 10.03 -39.64 -0.40 -1.20 16 10 C -0.08 -0.59 9.82 -39.47 -0.39 -0.98 16 11 C -0.05 -0.45 6.32 -39.52 -0.25 -0.70 16 12 Cl -0.05 -0.44 27.95 -51.86 -1.45 -1.89 16 13 C 0.02 0.19 6.36 -39.03 -0.25 -0.05 16 14 Cl -0.01 -0.13 25.02 -51.86 -1.30 -1.43 16 15 C 0.44 9.47 7.17 -10.99 -0.08 9.39 16 16 O -0.58 -14.18 15.41 5.54 0.09 -14.09 16 17 N -0.57 -13.07 4.98 -10.96 -0.05 -13.12 16 18 C -0.31 -8.38 10.16 -14.93 -0.15 -8.53 16 19 H 0.12 3.74 7.39 -52.49 -0.39 3.35 16 20 C 0.05 1.21 5.50 -17.47 -0.10 1.11 16 21 N -0.87 -24.66 13.96 55.50 0.77 -23.88 16 22 Si 0.88 18.74 27.74 -169.99 -4.71 14.03 16 23 H -0.27 -5.67 7.11 56.52 0.40 -5.27 16 24 H -0.27 -5.88 7.11 56.52 0.40 -5.47 16 25 H -0.27 -5.16 6.52 56.52 0.37 -4.80 16 26 H 0.06 0.91 8.14 -51.93 -0.42 0.48 16 27 H 0.07 0.91 8.14 -51.93 -0.42 0.49 16 28 H 0.07 0.98 7.56 -51.93 -0.39 0.58 16 29 H 0.41 5.81 5.82 -40.82 -0.24 5.58 16 30 H 0.15 1.23 6.40 -52.48 -0.34 0.89 16 31 H 0.15 0.64 8.06 -52.49 -0.42 0.21 16 32 H 0.15 0.72 8.06 -52.49 -0.42 0.30 16 33 H 0.37 7.56 5.18 -40.82 -0.21 7.35 16 34 H 0.28 7.18 8.31 -40.82 -0.34 6.84 16 LS Contribution 325.84 15.07 4.91 4.91 Total: -1.00 -31.66 325.84 -7.32 -38.98 By element: Atomic # 1 Polarization: 14.72 SS G_CDS: -2.82 Total: 11.90 kcal Atomic # 6 Polarization: 6.82 SS G_CDS: -2.55 Total: 4.26 kcal Atomic # 7 Polarization: -48.27 SS G_CDS: 0.45 Total: -47.82 kcal Atomic # 8 Polarization: -23.09 SS G_CDS: 0.16 Total: -22.94 kcal Atomic # 14 Polarization: 18.74 SS G_CDS: -4.71 Total: 14.03 kcal Atomic # 17 Polarization: -0.58 SS G_CDS: -2.75 Total: -3.32 kcal Total LS contribution 4.91 Total: 4.91 kcal Total: -31.66 -7.32 -38.98 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000339923563.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.369 kcal (2) G-P(sol) polarization free energy of solvation -31.663 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.032 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.319 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.982 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.351 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds