Wall clock time and date at job start Sat Apr 11 2020 02:27:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13606 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 C 1.53004 * 109.46866 * 236.55734 * 3 2 1 5 5 N 1.46505 * 109.46803 * 180.02562 * 4 3 2 6 6 C 1.46503 * 120.00021 * 270.00549 * 5 4 3 7 7 C 1.50706 * 109.46823 * 269.99864 * 6 5 4 8 8 H 1.08003 * 120.00089 * 0.02562 * 7 6 5 9 9 C 1.37874 * 119.99825 * 179.97438 * 7 6 5 10 10 N 1.31515 * 119.99847 * 0.02562 * 9 7 6 11 11 Si 1.86802 * 119.99932 * 180.02562 * 9 7 6 12 12 H 1.48499 * 109.47167 * 60.00268 * 11 9 7 13 13 H 1.48496 * 109.47145 * 180.02562 * 11 9 7 14 14 H 1.48497 * 109.47228 * 300.00692 * 11 9 7 15 15 C 1.34774 * 119.99779 * 90.00605 * 5 4 3 16 16 O 1.21285 * 119.99894 * 180.02562 * 15 5 4 17 17 C 1.50701 * 120.00054 * 359.97438 * 15 5 4 18 18 N 1.46505 * 109.47154 * 180.02562 * 17 15 5 19 19 C 1.35134 * 126.40029 * 265.02681 * 18 17 15 20 20 N 1.30494 * 108.73715 * 179.97438 * 19 18 17 21 21 C 1.34194 * 109.28496 * 359.97438 * 20 19 18 22 22 Cl 1.73606 * 125.99856 * 180.02562 * 21 20 19 23 23 C 1.34874 * 108.00104 * 0.02562 * 21 20 19 24 24 Cl 1.73598 * 126.60998 * 180.02562 * 23 21 20 25 25 H 1.08999 * 109.46776 * 116.56577 * 3 2 1 26 26 H 1.08996 * 109.47312 * 356.56406 * 3 2 1 27 27 H 1.08999 * 109.46735 * 60.00818 * 4 3 2 28 28 H 1.08991 * 109.47292 * 300.00236 * 4 3 2 29 29 H 1.08998 * 109.47105 * 29.99485 * 6 5 4 30 30 H 1.08994 * 109.46920 * 150.00321 * 6 5 4 31 31 H 0.97004 * 119.99290 * 179.97438 * 10 9 7 32 32 H 1.08993 * 109.46989 * 60.00178 * 17 15 5 33 33 H 1.09006 * 109.47126 * 299.99798 * 17 15 5 34 34 H 1.08004 * 125.62996 * 359.97438 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1176 0.7959 1.2037 5 7 4.5827 0.7970 1.2034 6 6 5.3162 -0.2612 1.9021 7 6 5.5674 0.1587 3.3276 8 1 5.2154 1.1178 3.6780 9 6 6.2456 -0.6819 4.1845 10 7 6.6737 -1.8499 3.7579 11 14 6.5563 -0.1617 5.9515 12 1 5.2585 0.0748 6.6334 13 1 7.2999 -1.2343 6.6598 14 1 7.3579 1.0883 5.9659 15 6 5.2556 1.7717 0.5602 16 8 6.4684 1.7724 0.5595 17 6 4.5010 2.8600 -0.1591 18 7 5.4521 3.7898 -0.7732 19 6 5.9007 4.9472 -0.2390 20 7 6.7346 5.5001 -1.0768 21 6 6.8487 4.7241 -2.1656 22 17 7.8450 5.0483 -3.5499 23 6 6.0535 3.6480 -1.9958 24 17 5.8352 2.3357 -3.1110 25 1 2.9711 0.4604 -0.9192 26 1 2.9718 -1.0249 0.0616 27 1 2.7545 0.3361 2.1229 28 1 2.7538 1.8214 1.1421 29 1 4.7278 -1.1787 1.8920 30 1 6.2686 -0.4347 1.4013 31 1 7.1511 -2.4411 4.3608 32 1 3.8738 3.3979 0.5517 33 1 3.8748 2.4170 -0.9336 34 1 5.6161 5.3484 0.7225 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000784986599.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 02:27:06 Heat of formation + Delta-G solvation = 50.614922 kcal Electronic energy + Delta-G solvation = -23083.282204 eV Core-core repulsion = 19297.975043 eV Total energy + Delta-G solvation = -3785.307161 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 330.039 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.41959 -39.52754 -37.07097 -36.94040 -36.66443 -35.54836 -34.18265 -32.97535 -31.08381 -29.59664 -28.75168 -26.76755 -24.28241 -23.19090 -21.88215 -21.52224 -19.25621 -17.94164 -17.84751 -17.08169 -16.60516 -15.90453 -15.61074 -15.27166 -14.91851 -14.82346 -14.73428 -14.36923 -14.10572 -13.85628 -13.30810 -12.81876 -12.64635 -12.55807 -12.19949 -12.11103 -11.94939 -11.93863 -11.67576 -11.43390 -11.34087 -11.17589 -11.04479 -10.74575 -10.34298 -10.27431 -10.15306 -9.89482 -9.26081 -8.59121 -8.47714 -8.13867 -6.21330 -4.27273 1.26276 1.57224 1.85300 2.52381 2.59380 2.65855 2.71362 2.84670 3.22028 3.28120 3.29185 3.39236 3.91566 4.30004 4.37214 4.52795 4.56145 4.65860 4.74406 4.84877 4.90618 5.14481 5.20047 5.59529 5.64426 5.75787 5.83789 6.55706 6.71206 7.10691 7.20894 7.41861 7.51522 7.72447 7.91010 8.00658 8.48325 8.76280 9.39018 10.86823 Molecular weight = 330.04amu Principal moments of inertia in cm(-1) A = 0.010401 B = 0.004085 C = 0.003270 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2691.501158 B = 6852.201624 C = 8559.834324 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.439 5.439 2 C 0.214 3.786 3 C -0.052 4.052 4 C 0.112 3.888 5 N -0.589 5.589 6 C 0.247 3.753 7 C -0.535 4.535 8 H 0.058 0.942 9 C 0.065 3.935 10 N -0.891 5.891 11 Si 0.898 3.102 12 H -0.276 1.276 13 H -0.286 1.286 14 H -0.276 1.276 15 C 0.491 3.509 16 O -0.507 6.507 17 C 0.073 3.927 18 N -0.429 5.429 19 C 0.235 3.765 20 N -0.473 5.473 21 C 0.075 3.925 22 Cl -0.001 7.001 23 C 0.048 3.952 24 Cl 0.010 6.990 25 H 0.104 0.896 26 H 0.121 0.879 27 H 0.102 0.898 28 H 0.075 0.925 29 H 0.039 0.961 30 H 0.048 0.952 31 H 0.266 0.734 32 H 0.131 0.869 33 H 0.119 0.881 34 H 0.224 0.776 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.167 9.037 -11.357 15.770 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.116 5.116 2 C -0.104 4.104 3 C -0.093 4.093 4 C -0.014 4.014 5 N -0.321 5.321 6 C 0.128 3.872 7 C -0.573 4.573 8 H 0.076 0.924 9 C -0.138 4.138 10 N -0.529 5.529 11 Si 0.725 3.275 12 H -0.202 1.202 13 H -0.211 1.211 14 H -0.201 1.201 15 C 0.274 3.726 16 O -0.381 6.381 17 C -0.053 4.053 18 N -0.114 5.114 19 C -0.047 4.047 20 N -0.193 5.193 21 C -0.082 4.082 22 Cl 0.027 6.973 23 C -0.095 4.095 24 Cl 0.038 6.962 25 H 0.122 0.878 26 H 0.139 0.861 27 H 0.120 0.880 28 H 0.093 0.907 29 H 0.057 0.943 30 H 0.066 0.934 31 H 0.076 0.924 32 H 0.149 0.851 33 H 0.137 0.863 34 H 0.240 0.760 Dipole moment (debyes) X Y Z Total from point charges -6.697 9.389 -11.326 16.164 hybrid contribution 0.219 -0.796 0.798 1.148 sum -6.478 8.593 -10.528 15.054 Atomic orbital electron populations 1.81239 1.12962 1.08878 1.08544 1.29014 0.95006 0.93156 0.93237 1.19884 0.81597 1.05900 1.01918 1.21413 0.81871 1.00060 0.98052 1.48224 1.05004 1.27468 1.51378 1.19430 0.92611 0.83646 0.91487 1.21308 1.37428 1.03449 0.95159 0.92366 1.24906 0.95087 0.94794 0.98995 1.69901 1.37734 1.09023 1.36255 0.86562 0.78447 0.78417 0.84052 1.20173 1.21107 1.20119 1.20196 0.88524 0.83220 0.80659 1.90813 1.13032 1.74374 1.59856 1.22141 0.91070 0.92100 0.99993 1.44817 1.34497 1.18878 1.13167 1.24922 0.95558 0.84177 1.00070 1.70102 1.17979 1.29915 1.01297 1.20175 1.00483 0.93894 0.93645 1.98361 1.67278 1.95607 1.36011 1.21006 1.04560 0.95154 0.88731 1.98398 1.96420 1.45236 1.56167 0.87772 0.86136 0.88001 0.90696 0.94345 0.93419 0.92440 0.85085 0.86341 0.76019 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.44 -5.73 18.54 42.16 0.78 -4.95 16 2 C 0.21 2.17 15.43 -20.76 -0.32 1.85 16 3 C -0.05 -0.42 6.03 -29.52 -0.18 -0.60 16 4 C 0.11 1.16 5.17 -4.04 -0.02 1.14 16 5 N -0.59 -9.13 2.46 -175.05 -0.43 -9.56 16 6 C 0.25 5.32 5.16 -5.19 -0.03 5.29 16 7 C -0.53 -13.27 9.39 -34.44 -0.32 -13.59 16 8 H 0.06 1.43 7.81 -52.48 -0.41 1.02 16 9 C 0.07 1.70 5.46 -17.82 -0.10 1.60 16 10 N -0.89 -24.39 13.29 55.43 0.74 -23.65 16 11 Si 0.90 20.29 29.54 -169.99 -5.02 15.27 16 12 H -0.28 -6.05 7.11 56.52 0.40 -5.65 16 13 H -0.29 -6.45 7.11 56.52 0.40 -6.05 16 14 H -0.28 -6.31 7.11 56.52 0.40 -5.91 16 15 C 0.49 7.67 7.74 -10.99 -0.09 7.58 16 16 O -0.51 -10.75 16.01 5.55 0.09 -10.66 16 17 C 0.07 0.74 5.03 -5.19 -0.03 0.71 16 18 N -0.43 -5.33 2.24 -116.31 -0.26 -5.59 16 19 C 0.24 2.85 12.56 -90.30 -1.13 1.72 16 20 N -0.47 -6.95 11.25 -11.74 -0.13 -7.08 16 21 C 0.07 1.09 7.71 -17.71 -0.14 0.95 16 22 Cl 0.00 -0.01 29.17 -51.86 -1.51 -1.52 16 23 C 0.05 0.66 7.50 -16.44 -0.12 0.54 16 24 Cl 0.01 0.12 28.92 -51.86 -1.50 -1.38 16 25 H 0.10 0.64 7.22 -51.93 -0.37 0.27 16 26 H 0.12 1.01 8.14 -51.93 -0.42 0.59 16 27 H 0.10 1.17 8.07 -51.93 -0.42 0.75 16 28 H 0.07 0.54 6.44 -51.93 -0.33 0.21 16 29 H 0.04 0.82 8.07 -51.93 -0.42 0.41 16 30 H 0.05 1.21 7.42 -51.93 -0.39 0.83 16 31 H 0.27 6.98 8.31 -40.82 -0.34 6.64 16 32 H 0.13 0.85 7.39 -51.93 -0.38 0.47 16 33 H 0.12 0.89 7.12 -51.93 -0.37 0.52 16 34 H 0.22 1.77 8.06 -52.48 -0.42 1.35 16 LS Contribution 343.97 15.07 5.18 5.18 Total: -1.00 -33.71 343.97 -7.61 -41.33 By element: Atomic # 1 Polarization: -1.51 SS G_CDS: -3.08 Total: -4.59 kcal Atomic # 6 Polarization: 9.67 SS G_CDS: -2.47 Total: 7.20 kcal Atomic # 7 Polarization: -51.53 SS G_CDS: 0.69 Total: -50.83 kcal Atomic # 8 Polarization: -10.75 SS G_CDS: 0.09 Total: -10.66 kcal Atomic # 14 Polarization: 20.29 SS G_CDS: -5.02 Total: 15.27 kcal Atomic # 17 Polarization: 0.11 SS G_CDS: -3.01 Total: -2.91 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -33.71 -7.61 -41.33 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000784986599.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 91.940 kcal (2) G-P(sol) polarization free energy of solvation -33.710 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.230 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.615 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.325 kcal (6) G-S(sol) free energy of system = (1) + (5) 50.615 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds