Wall clock time and date at job start Sat Apr 11 2020 02:27:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13594 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 N 1.46503 * 109.47531 * 158.06894 * 3 2 1 5 5 C 1.36973 * 119.99847 * 95.73511 * 4 3 2 6 6 H 1.07997 * 119.99771 * 145.03114 * 5 4 3 7 7 C 1.38979 * 120.00343 * 325.31252 * 5 4 3 8 8 N 1.31406 * 120.00249 * 58.62099 * 7 5 4 9 9 Si 1.86797 * 119.99673 * 238.62482 * 7 5 4 10 10 H 1.48499 * 109.47468 * 90.00102 * 9 7 5 11 11 H 1.48503 * 109.47125 * 209.99715 * 9 7 5 12 12 H 1.48500 * 109.47549 * 329.99596 * 9 7 5 13 13 C 1.34775 * 119.99773 * 275.74427 * 4 3 2 14 14 O 1.21632 * 119.99787 * 182.25844 * 13 4 3 15 15 C 1.47334 * 120.00134 * 2.25658 * 13 4 3 16 16 C 1.41358 * 126.41927 * 5.78772 * 15 13 4 17 17 N 1.30472 * 108.06925 * 179.97438 * 16 15 13 18 18 N 1.39932 * 108.93421 * 0.02562 * 17 16 15 19 19 C 1.40174 * 125.76841 * 179.97438 * 18 17 16 20 20 C 1.38841 * 120.05591 * 179.70101 * 19 18 17 21 21 C 1.38109 * 119.94455 * 179.69694 * 20 19 18 22 22 C 1.38392 * 120.05445 * 0.60458 * 21 20 19 23 23 Cl 1.73595 * 119.94659 * 179.69580 * 22 21 20 24 24 C 1.38390 * 120.10475 * 359.67137 * 22 21 20 25 25 C 1.38104 * 120.05791 * 0.02837 * 24 22 21 26 26 C 1.34558 * 108.46388 * 359.72880 * 18 17 16 27 27 H 1.08998 * 109.47182 * 38.06983 * 3 2 1 28 28 H 1.09003 * 109.47083 * 278.06948 * 3 2 1 29 29 H 0.97001 * 120.00029 * 180.02562 * 8 7 5 30 30 H 1.07997 * 125.96212 * 359.97438 * 16 15 13 31 31 H 1.08003 * 120.02460 * 359.97438 * 20 19 18 32 32 H 1.08003 * 119.96974 * 180.29707 * 21 20 19 33 33 H 1.08009 * 119.96760 * 180.02562 * 24 22 21 34 34 H 1.08000 * 120.02359 * 180.02562 * 25 24 22 35 35 H 1.07997 * 126.31436 * 180.25803 * 26 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.6079 0.0007 0.0000 4 7 3.0958 1.2821 -0.5159 5 6 3.4354 2.2854 0.3526 6 1 4.2573 2.9462 0.1195 7 6 2.7263 2.4494 1.5366 8 7 2.6628 1.4662 2.4061 9 14 1.8632 4.0675 1.8917 10 1 0.4778 4.0170 1.3595 11 1 1.8218 4.2949 3.3587 12 1 2.6039 5.1772 1.2396 13 6 3.2102 1.4739 -1.8450 14 8 3.6540 2.5227 -2.2721 15 6 2.7979 0.4130 -2.7805 16 6 2.1632 -0.8040 -2.4425 17 7 1.9605 -1.4742 -3.5434 18 7 2.4486 -0.7309 -4.6238 19 6 2.4119 -1.1208 -5.9698 20 6 2.9273 -0.2839 -6.9504 21 6 2.8957 -0.6731 -8.2752 22 6 2.3395 -1.8906 -8.6268 23 17 2.2941 -2.3735 -10.2936 24 6 1.8200 -2.7239 -7.6517 25 6 1.8549 -2.3419 -6.3250 26 6 2.9541 0.4238 -4.1530 27 1 2.9716 -0.8082 -0.6337 28 1 2.9713 -0.1434 1.0175 29 1 2.1675 1.5805 3.2322 30 1 1.8932 -1.1232 -1.4467 31 1 3.3567 0.6687 -6.6770 32 1 3.3008 -0.0245 -9.0379 33 1 1.3868 -3.6738 -7.9286 34 1 1.4496 -2.9929 -5.5644 35 1 3.4017 1.2124 -4.7397 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000162010191.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 02:27:54 Heat of formation + Delta-G solvation = 142.798877 kcal Electronic energy + Delta-G solvation = -24247.435165 eV Core-core repulsion = 20468.558249 eV Total energy + Delta-G solvation = -3778.876915 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 330.062 amu Computer time = 1.86 seconds Orbital eigenvalues (eV) -41.65679 -39.54565 -38.42963 -36.81251 -36.21866 -34.57415 -33.63082 -32.26019 -31.69213 -30.10928 -29.26927 -27.72722 -25.42969 -23.67206 -23.54059 -21.51101 -20.92921 -19.44436 -18.38125 -17.96836 -17.07875 -16.67549 -16.18977 -15.46658 -15.35428 -15.23900 -14.71871 -14.53994 -14.23524 -14.00449 -13.82038 -13.48250 -13.23512 -12.99452 -12.62854 -12.32633 -12.18225 -12.06370 -11.98949 -11.91910 -11.69131 -11.46821 -11.23298 -10.87634 -10.77868 -10.55178 -10.35051 -10.13215 -9.53171 -9.00180 -8.85507 -8.59074 -8.20200 -8.11114 -7.08310 -3.92836 0.39448 0.83411 1.75150 1.90478 2.23148 2.40420 3.07203 3.19158 3.28179 3.28941 3.37996 3.39621 3.95781 4.11717 4.18650 4.39881 4.44682 4.54378 4.68563 4.83741 4.85937 4.89074 5.01883 5.16198 5.36985 5.52943 5.56423 5.60791 5.72055 5.79818 5.93329 5.94982 6.17375 6.44879 6.51526 6.99426 7.19524 7.55511 8.07911 8.14492 8.26617 8.94097 9.09236 9.76899 10.01668 Molecular weight = 330.06amu Principal moments of inertia in cm(-1) A = 0.029223 B = 0.002585 C = 0.002463 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 957.924666 B =10827.327104 C =11367.624201 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.448 5.448 2 C 0.207 3.793 3 C 0.159 3.841 4 N -0.422 5.422 5 C -0.389 4.389 6 H 0.113 0.887 7 C 0.106 3.894 8 N -0.784 5.784 9 Si 0.852 3.148 10 H -0.274 1.274 11 H -0.286 1.286 12 H -0.259 1.259 13 C 0.526 3.474 14 O -0.570 6.570 15 C -0.238 4.238 16 C 0.058 3.942 17 N -0.294 5.294 18 N -0.324 5.324 19 C 0.176 3.824 20 C -0.131 4.131 21 C -0.080 4.080 22 C -0.052 4.052 23 Cl -0.069 7.069 24 C -0.085 4.085 25 C -0.109 4.109 26 C 0.100 3.900 27 H 0.104 0.896 28 H 0.155 0.845 29 H 0.280 0.720 30 H 0.209 0.791 31 H 0.144 0.856 32 H 0.144 0.856 33 H 0.142 0.858 34 H 0.149 0.851 35 H 0.190 0.810 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.409 -9.660 -16.371 19.061 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.127 5.127 2 C -0.111 4.111 3 C 0.032 3.968 4 N -0.141 5.141 5 C -0.511 4.511 6 H 0.130 0.870 7 C -0.111 4.111 8 N -0.412 5.412 9 Si 0.674 3.326 10 H -0.199 1.199 11 H -0.212 1.212 12 H -0.183 1.183 13 C 0.316 3.684 14 O -0.454 6.454 15 C -0.252 4.252 16 C -0.130 4.130 17 N -0.111 5.111 18 N -0.098 5.098 19 C 0.082 3.918 20 C -0.152 4.152 21 C -0.100 4.100 22 C -0.079 4.079 23 Cl -0.040 7.040 24 C -0.104 4.104 25 C -0.130 4.130 26 C -0.044 4.044 27 H 0.122 0.878 28 H 0.173 0.827 29 H 0.091 0.909 30 H 0.225 0.775 31 H 0.162 0.838 32 H 0.161 0.839 33 H 0.160 0.840 34 H 0.166 0.834 35 H 0.207 0.793 Dipole moment (debyes) X Y Z Total from point charges -0.540 -10.357 -17.033 19.942 hybrid contribution 0.073 1.435 0.702 1.600 sum -0.467 -8.921 -16.331 18.614 Atomic orbital electron populations 1.81046 1.13413 1.08074 1.10142 1.30110 0.96183 0.92972 0.91878 1.20182 0.80536 0.89850 1.06244 1.43221 1.56401 1.10466 1.03978 1.18896 1.19923 1.09943 1.02333 0.86973 1.25315 0.93842 0.97726 0.94203 1.70317 1.29215 1.36164 1.05503 0.87153 0.81778 0.86653 0.76977 1.19921 1.21221 1.18273 1.16836 0.84310 0.85995 0.81258 1.90631 1.50199 1.27860 1.76692 1.20826 1.12047 0.98650 0.93657 1.25449 0.96375 0.92864 0.98265 1.77185 1.21546 1.19591 0.92820 1.45612 1.45266 1.14296 1.04577 1.17655 0.99109 0.95128 0.79873 1.20870 1.02413 1.00549 0.91386 1.20847 0.98400 0.94895 0.95829 1.20937 1.04618 0.96625 0.85766 1.98376 1.97321 1.91675 1.16629 1.20944 0.98706 0.99774 0.90987 1.20884 1.00251 0.95375 0.96452 1.22904 0.97290 0.89616 0.94616 0.87841 0.82747 0.90921 0.77519 0.83840 0.83872 0.84047 0.83365 0.79318 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 45. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.45 -9.70 18.54 42.15 0.78 -8.92 16 2 C 0.21 4.18 12.68 -20.76 -0.26 3.92 16 3 C 0.16 3.00 4.73 -6.83 -0.03 2.96 16 4 N -0.42 -9.58 2.59 -119.18 -0.31 -9.89 16 5 C -0.39 -9.75 8.79 -14.98 -0.13 -9.88 16 6 H 0.11 3.01 7.83 -52.49 -0.41 2.60 16 7 C 0.11 2.55 4.86 -17.46 -0.08 2.47 16 8 N -0.78 -18.06 11.47 55.50 0.64 -17.42 16 9 Si 0.85 19.31 29.69 -169.99 -5.05 14.27 16 10 H -0.27 -6.55 7.11 56.52 0.40 -6.15 16 11 H -0.29 -6.27 7.11 56.52 0.40 -5.87 16 12 H -0.26 -5.98 7.11 56.52 0.40 -5.58 16 13 C 0.53 11.89 7.56 -12.56 -0.09 11.79 16 14 O -0.57 -14.59 16.73 5.25 0.09 -14.50 16 15 C -0.24 -4.43 5.97 -105.05 -0.63 -5.06 16 16 C 0.06 0.98 9.23 -16.94 -0.16 0.83 16 17 N -0.29 -4.78 11.77 30.88 0.36 -4.42 16 18 N -0.32 -4.81 3.77 -10.18 -0.04 -4.85 16 19 C 0.18 2.13 6.68 -83.59 -0.56 1.57 16 20 C -0.13 -1.29 9.44 -39.41 -0.37 -1.66 16 21 C -0.08 -0.68 9.82 -39.57 -0.39 -1.07 16 22 C -0.05 -0.46 6.32 -39.47 -0.25 -0.71 16 23 Cl -0.07 -0.56 28.95 -51.86 -1.50 -2.06 16 24 C -0.08 -0.75 9.82 -39.57 -0.39 -1.14 16 25 C -0.11 -1.18 9.65 -39.41 -0.38 -1.56 16 26 C 0.10 1.59 10.61 -16.39 -0.17 1.41 16 27 H 0.10 1.59 4.78 -51.93 -0.25 1.35 16 28 H 0.16 3.00 6.05 -51.93 -0.31 2.69 16 29 H 0.28 6.12 8.31 -40.82 -0.34 5.78 16 30 H 0.21 3.30 3.29 -52.49 -0.17 3.13 16 31 H 0.14 1.19 6.71 -52.48 -0.35 0.84 16 32 H 0.14 0.90 8.06 -52.48 -0.42 0.48 16 33 H 0.14 0.96 8.06 -52.48 -0.42 0.54 16 34 H 0.15 1.60 7.68 -52.49 -0.40 1.20 16 35 H 0.19 2.49 7.01 -52.49 -0.37 2.13 16 LS Contribution 328.79 15.07 4.95 4.95 Total: -1.00 -29.60 328.79 -6.22 -35.82 By element: Atomic # 1 Polarization: 5.38 SS G_CDS: -2.25 Total: 3.13 kcal Atomic # 6 Polarization: 7.78 SS G_CDS: -3.90 Total: 3.88 kcal Atomic # 7 Polarization: -46.93 SS G_CDS: 1.43 Total: -45.49 kcal Atomic # 8 Polarization: -14.59 SS G_CDS: 0.09 Total: -14.50 kcal Atomic # 14 Polarization: 19.31 SS G_CDS: -5.05 Total: 14.27 kcal Atomic # 17 Polarization: -0.56 SS G_CDS: -1.50 Total: -2.06 kcal Total LS contribution 4.95 Total: 4.95 kcal Total: -29.60 -6.22 -35.82 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000162010191.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 178.619 kcal (2) G-P(sol) polarization free energy of solvation -29.597 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 149.022 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.223 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.820 kcal (6) G-S(sol) free energy of system = (1) + (5) 142.799 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.86 seconds