Wall clock time and date at job start Sat Apr 11 2020 02:27:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.43202 * 179.97438 * 2 1 4 4 C 1.43198 * 119.99761 * 150.02070 * 3 2 1 5 5 N 3.51030 * 140.69095 * 150.01739 * 2 1 3 6 6 C 1.41128 * 120.00160 * 330.01558 * 3 2 1 7 7 C 1.38942 * 120.00263 * 355.46328 * 6 3 2 8 8 H 1.08003 * 119.99586 * 331.28033 * 7 6 3 9 9 C 1.40851 * 120.00400 * 151.28043 * 7 6 3 10 10 N 1.30321 * 120.00255 * 167.76015 * 9 7 6 11 11 Si 1.86805 * 119.99813 * 347.76233 * 9 7 6 12 12 H 1.48497 * 109.47384 * 89.66696 * 11 9 7 13 13 H 1.48501 * 109.46849 * 209.66674 * 11 9 7 14 14 H 1.48497 * 109.47038 * 329.66043 * 11 9 7 15 15 N 1.38445 * 120.00036 * 175.46474 * 6 3 2 16 16 C 1.38824 * 120.00195 * 121.59305 * 15 6 3 17 17 N 1.33183 * 120.53708 * 356.83903 * 16 15 6 18 18 C 1.31849 * 120.90985 * 179.97438 * 17 16 15 19 19 Cl 1.73599 * 119.06184 * 180.35472 * 18 17 16 20 20 N 1.31923 * 121.87393 * 0.07812 * 18 17 16 21 21 C 1.33199 * 120.70400 * 359.97438 * 20 18 17 22 22 C 1.38707 * 119.22315 * 359.90043 * 21 20 18 23 23 C 1.50309 * 121.80218 * 180.26413 * 22 21 20 24 24 C 1.52963 * 110.33454 * 339.83340 * 23 22 21 25 25 C 1.53421 * 108.86145 * 50.61184 * 24 23 22 26 26 N 1.38673 * 119.88847 * 179.67740 * 21 20 18 27 27 H 0.97001 * 119.99942 * 180.02562 * 10 9 7 28 28 H 0.97001 * 119.99270 * 301.59751 * 15 6 3 29 29 H 1.08995 * 109.32909 * 100.10082 * 23 22 21 30 30 H 1.08994 * 109.32366 * 219.57304 * 23 22 21 31 31 H 1.08999 * 109.56871 * 170.42169 * 24 23 22 32 32 H 1.09000 * 109.57218 * 290.79579 * 24 23 22 33 33 H 1.08994 * 109.77437 * 56.66164 * 25 24 23 34 34 H 1.08998 * 109.76609 * 177.44704 * 25 24 23 35 35 H 0.96997 * 120.55445 * 346.35715 * 26 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2835 1.0752 -0.6197 5 7 3.8521 1.9262 -1.1113 6 6 3.2742 -1.0577 0.6108 7 6 2.5832 -2.0510 1.2937 8 1 1.6359 -1.8261 1.7611 9 6 3.1182 -3.3514 1.3764 10 7 2.6042 -4.2160 2.2051 11 14 4.5645 -3.8366 0.2982 12 1 5.8338 -3.5300 1.0052 13 1 4.4988 -5.2914 0.0074 14 1 4.5103 -3.0745 -0.9751 15 7 4.6554 -1.1060 0.5296 16 6 5.4189 -1.1176 1.6890 17 7 4.8375 -1.0194 2.8832 18 6 5.5555 -1.0302 3.9890 19 17 4.7471 -0.9086 5.5204 20 7 6.8702 -1.1361 3.9649 21 6 7.5233 -1.2374 2.8084 22 6 6.8046 -1.2326 1.6221 23 6 7.4817 -1.3495 0.2853 24 6 8.9586 -0.9690 0.4024 25 6 9.5822 -1.7531 1.5643 26 7 8.9062 -1.3412 2.8026 27 1 2.9729 -5.1114 2.2623 28 1 5.0895 -1.1317 -0.3374 29 1 7.4009 -2.3763 -0.0715 30 1 6.9929 -0.6838 -0.4260 31 1 9.4744 -1.2183 -0.5249 32 1 9.0459 0.1003 0.5949 33 1 9.4412 -2.8221 1.4054 34 1 10.6463 -1.5270 1.6325 35 1 9.4187 -1.1456 3.6025 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001169080265.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 02:27:16 Heat of formation + Delta-G solvation = 111.889349 kcal Electronic energy + Delta-G solvation = -25556.706026 eV Core-core repulsion = 21808.781524 eV Total energy + Delta-G solvation = -3747.924502 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 330.069 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -41.18530 -38.16296 -37.48241 -36.30852 -35.48710 -34.78195 -34.33492 -33.16348 -31.82091 -31.13545 -29.36399 -27.29367 -25.53754 -24.24754 -23.16161 -21.35859 -20.47400 -19.28588 -18.89660 -17.71856 -17.09288 -16.43910 -16.33224 -15.71223 -15.33360 -14.80692 -14.70174 -14.54590 -14.02319 -13.80016 -13.35561 -13.02216 -12.81561 -12.75384 -12.60905 -12.23254 -11.89823 -11.79176 -11.63058 -11.55774 -11.41459 -11.26616 -11.12418 -11.09044 -10.99720 -10.76667 -10.60629 -10.42696 -10.10129 -9.66551 -8.94066 -8.66603 -8.09535 -7.80297 -7.51542 -5.38541 1.19732 1.60686 1.70499 2.09351 2.58468 2.72032 2.75775 3.06545 3.28404 3.36551 3.81965 4.00447 4.03068 4.24772 4.29536 4.51746 4.69466 4.71121 4.85869 4.87479 5.13870 5.19438 5.23712 5.44133 5.48318 5.54842 5.68864 5.81034 5.98113 5.99634 6.12582 6.39294 6.62855 6.91382 7.08362 7.23643 7.44346 7.52210 7.73603 7.86277 8.10023 8.47772 8.88770 9.14085 9.17890 Molecular weight = 330.07amu Principal moments of inertia in cm(-1) A = 0.010095 B = 0.006098 C = 0.005428 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2773.009755 B = 4590.734560 C = 5157.145457 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.526 5.526 2 C 0.325 3.675 3 C -0.297 4.297 4 C 0.308 3.692 5 N -0.534 5.534 6 C 0.332 3.668 7 C -0.317 4.317 8 H 0.125 0.875 9 C 0.075 3.925 10 N -0.719 5.719 11 Si 0.908 3.092 12 H -0.248 1.248 13 H -0.280 1.280 14 H -0.247 1.247 15 N -0.655 5.655 16 C 0.484 3.516 17 N -0.545 5.545 18 C 0.436 3.564 19 Cl 0.017 6.983 20 N -0.597 5.597 21 C 0.473 3.527 22 C -0.307 4.307 23 C -0.063 4.063 24 C -0.136 4.136 25 C 0.127 3.873 26 N -0.717 5.717 27 H 0.303 0.697 28 H 0.411 0.589 29 H 0.071 0.929 30 H 0.075 0.925 31 H 0.082 0.918 32 H 0.074 0.926 33 H 0.064 0.936 34 H 0.087 0.913 35 H 0.409 0.591 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 16.830 -4.523 1.869 17.527 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.208 5.208 2 C 0.016 3.984 3 C -0.316 4.316 4 C 0.001 3.999 5 N -0.216 5.216 6 C 0.231 3.769 7 C -0.344 4.344 8 H 0.142 0.858 9 C -0.157 4.157 10 N -0.336 5.336 11 Si 0.732 3.268 12 H -0.173 1.173 13 H -0.207 1.207 14 H -0.170 1.170 15 N -0.285 5.285 16 C 0.244 3.756 17 N -0.272 5.272 18 C 0.139 3.861 19 Cl 0.045 6.955 20 N -0.328 5.328 21 C 0.233 3.767 22 C -0.322 4.322 23 C -0.101 4.101 24 C -0.174 4.174 25 C 0.002 3.998 26 N -0.352 5.352 27 H 0.115 0.885 28 H 0.252 0.748 29 H 0.090 0.910 30 H 0.094 0.906 31 H 0.101 0.899 32 H 0.092 0.908 33 H 0.083 0.917 34 H 0.105 0.895 35 H 0.246 0.754 Dipole moment (debyes) X Y Z Total from point charges 15.277 -3.432 2.086 15.796 hybrid contribution 1.322 -0.712 -0.582 1.611 sum 16.599 -4.145 1.504 17.175 Atomic orbital electron populations 1.81062 1.12170 1.10937 1.16644 1.24560 0.91182 0.91779 0.90839 1.12694 0.83167 1.01875 1.33815 1.25208 0.92490 0.91447 0.90779 1.81043 1.09936 1.12708 1.17960 1.16743 0.78736 0.91045 0.90405 1.19978 1.05170 0.91170 1.18044 0.85762 1.26719 0.98018 0.96419 0.94521 1.69394 1.34518 1.06211 1.23491 0.86317 0.80599 0.78487 0.81404 1.17265 1.20693 1.17046 1.42269 1.05707 1.75281 1.05290 1.17573 0.86070 0.86045 0.85914 1.67453 1.39662 1.24092 0.96030 1.22035 0.84545 0.91384 0.88176 1.98411 1.77756 1.95593 1.23709 1.67368 1.09155 1.27941 1.28344 1.17426 0.85452 0.86887 0.86952 1.19710 0.92904 1.23208 0.96406 1.20101 0.94990 1.01899 0.93111 1.21882 0.95670 1.01174 0.98661 1.21653 0.96193 0.98642 0.83284 1.44284 1.01718 1.74630 1.14583 0.88529 0.74822 0.91021 0.90638 0.89917 0.90759 0.91737 0.89454 0.75449 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.53 -12.85 18.54 41.84 0.78 -12.08 16 2 C 0.32 7.57 14.06 -22.47 -0.32 7.26 16 3 C -0.30 -6.47 5.88 -104.95 -0.62 -7.09 16 4 C 0.31 6.75 14.82 -22.49 -0.33 6.42 16 5 N -0.53 -12.07 18.53 41.81 0.77 -11.29 16 6 C 0.33 6.86 4.98 -83.52 -0.42 6.44 16 7 C -0.32 -6.93 7.99 -38.33 -0.31 -7.24 16 8 H 0.12 3.01 7.50 -52.48 -0.39 2.62 16 9 C 0.08 1.56 5.35 -17.20 -0.09 1.46 16 10 N -0.72 -15.30 13.90 55.60 0.77 -14.53 16 11 Si 0.91 15.71 24.06 -169.99 -4.09 11.62 16 12 H -0.25 -4.15 4.96 56.52 0.28 -3.87 16 13 H -0.28 -4.82 7.11 56.52 0.40 -4.42 16 14 H -0.25 -4.01 6.61 56.52 0.37 -3.63 16 15 N -0.65 -11.92 2.15 -9.62 -0.02 -11.94 16 16 C 0.48 8.84 5.08 -154.50 -0.78 8.06 16 17 N -0.54 -10.87 9.00 -10.87 -0.10 -10.97 16 18 C 0.44 8.05 8.18 -92.00 -0.75 7.30 16 19 Cl 0.02 0.29 29.27 -51.86 -1.52 -1.23 16 20 N -0.60 -10.11 10.45 -11.03 -0.12 -10.23 16 21 C 0.47 7.15 7.50 -154.81 -1.16 5.99 16 22 C -0.31 -4.78 4.79 -104.28 -0.50 -5.28 16 23 C -0.06 -0.74 5.12 -28.09 -0.14 -0.89 16 24 C -0.14 -1.17 6.13 -26.53 -0.16 -1.34 16 25 C 0.13 1.00 7.10 -3.57 -0.03 0.97 16 26 N -0.72 -7.77 5.81 -59.89 -0.35 -8.12 16 27 H 0.30 5.75 8.28 -40.82 -0.34 5.41 16 28 H 0.41 6.62 6.07 -40.82 -0.25 6.37 16 29 H 0.07 0.80 7.25 -51.93 -0.38 0.43 16 30 H 0.08 0.89 7.02 -51.93 -0.36 0.53 16 31 H 0.08 0.52 8.14 -51.93 -0.42 0.10 16 32 H 0.07 0.70 8.14 -51.93 -0.42 0.28 16 33 H 0.06 0.51 8.14 -51.93 -0.42 0.09 16 34 H 0.09 0.43 8.14 -51.93 -0.42 0.00 16 35 H 0.41 3.76 8.96 -40.82 -0.37 3.39 16 LS Contribution 325.00 15.07 4.90 4.90 Total: -1.00 -27.20 325.00 -7.30 -34.51 By element: Atomic # 1 Polarization: 10.01 SS G_CDS: -2.72 Total: 7.29 kcal Atomic # 6 Polarization: 27.68 SS G_CDS: -5.61 Total: 22.07 kcal Atomic # 7 Polarization: -80.90 SS G_CDS: 1.74 Total: -79.16 kcal Atomic # 14 Polarization: 15.71 SS G_CDS: -4.09 Total: 11.62 kcal Atomic # 17 Polarization: 0.29 SS G_CDS: -1.52 Total: -1.23 kcal Total LS contribution 4.90 Total: 4.90 kcal Total: -27.20 -7.30 -34.51 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001169080265.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 146.395 kcal (2) G-P(sol) polarization free energy of solvation -27.205 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 119.190 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.301 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.506 kcal (6) G-S(sol) free energy of system = (1) + (5) 111.889 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds