Wall clock time and date at job start Sat Apr 11 2020 02:58:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 H 1.09000 * 109.69985 * 2 1 4 4 C 1.53191 * 109.58623 * 120.35685 * 2 1 3 5 5 H 1.09006 * 109.52134 * 54.45627 * 4 2 1 6 6 N 1.46501 * 109.49501 * 294.37773 * 4 2 1 7 7 C 1.34772 * 119.99888 * 155.16527 * 6 4 2 8 8 O 1.21630 * 119.99871 * 359.97438 * 7 6 4 9 9 C 1.47262 * 120.00284 * 179.97438 * 7 6 4 10 10 C 1.46748 * 126.92041 * 0.16795 * 9 7 6 11 11 C 1.34065 * 106.30877 * 180.25440 * 10 9 7 12 12 N 1.37085 * 109.04409 * 359.78460 * 11 10 9 13 13 C 1.34580 * 109.94650 * 359.95138 * 12 11 10 14 14 C 1.47031 * 123.95463 * 179.91666 * 12 11 10 15 15 C 1.53139 * 108.84542 * 342.49012 * 14 12 11 16 16 C 1.53136 * 109.59788 * 51.17889 * 15 14 12 17 17 C 1.51092 * 126.72848 * 179.84589 * 11 10 9 18 18 C 1.53039 * 109.31280 * 174.42339 * 4 2 1 19 19 C 1.53041 * 109.53643 * 298.63563 * 18 4 2 20 20 C 1.53193 * 109.31552 * 61.36680 * 19 18 4 21 21 N 1.46927 * 109.58500 * 239.64972 * 2 1 3 22 22 C 1.36941 * 120.63437 * 6.60067 * 21 2 1 23 23 H 1.07998 * 119.99526 * 330.16804 * 22 21 2 24 24 C 1.38808 * 119.99923 * 150.16925 * 22 21 2 25 25 N 1.31626 * 119.99838 * 344.49046 * 24 22 21 26 26 Si 1.86797 * 120.00055 * 164.49598 * 24 22 21 27 27 H 1.48500 * 109.47187 * 89.99810 * 26 24 22 28 28 H 1.48496 * 109.46952 * 209.99595 * 26 24 22 29 29 H 1.48499 * 109.47143 * 329.99784 * 26 24 22 30 30 H 1.08999 * 109.47168 * 299.64460 * 1 2 3 31 31 H 1.09004 * 109.47105 * 59.64479 * 1 2 3 32 32 H 1.08997 * 109.46979 * 179.63749 * 1 2 3 33 33 H 0.96995 * 120.00095 * 335.15258 * 6 4 2 34 34 H 1.07993 * 126.84918 * 359.97438 * 10 9 7 35 35 H 1.07995 * 125.72311 * 180.02562 * 13 12 11 36 36 H 1.09007 * 109.57366 * 102.30211 * 14 12 11 37 37 H 1.09003 * 109.57832 * 222.68379 * 14 12 11 38 38 H 1.08997 * 109.45356 * 291.14016 * 15 14 12 39 39 H 1.09003 * 109.45025 * 171.21347 * 15 14 12 40 40 H 1.09001 * 109.52479 * 169.93430 * 16 15 14 41 41 H 1.09005 * 109.57658 * 49.76984 * 16 15 14 42 42 H 1.09001 * 109.72068 * 283.84871 * 17 11 10 43 43 H 1.09002 * 109.71917 * 44.45724 * 17 11 10 44 44 H 1.09001 * 109.46054 * 58.65601 * 18 4 2 45 45 H 1.08997 * 109.45950 * 178.61191 * 18 4 2 46 46 H 1.08999 * 109.49610 * 181.31941 * 19 18 4 47 47 H 1.09001 * 109.49715 * 301.41645 * 19 18 4 48 48 H 1.08997 * 109.58622 * 65.14946 * 20 19 18 49 49 H 1.08998 * 109.58990 * 185.58013 * 20 19 18 50 50 H 0.97004 * 119.99314 * 180.02562 * 25 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8975 1.0262 0.0000 4 6 2.0436 -0.7294 1.2454 5 1 1.6030 -1.7254 1.2918 6 7 1.6704 0.0267 2.4435 7 6 1.5503 -0.6044 3.6283 8 8 1.7512 -1.8016 3.7027 9 6 1.1758 0.1557 4.8327 10 6 0.8967 1.5939 4.9162 11 6 0.6052 1.8470 6.2000 12 7 0.6775 0.6788 6.9138 13 6 1.0147 -0.3373 6.0984 14 6 0.4198 0.5816 8.3581 15 6 0.5039 1.9825 8.9709 16 6 -0.3820 2.9454 8.1752 17 6 0.2489 3.1879 6.7984 18 6 3.5675 -0.8480 1.1701 19 6 3.9569 -1.6657 -0.0635 20 6 3.4651 -0.9469 -1.3238 21 7 2.0225 -0.6995 -1.1946 22 6 1.1537 -1.1130 -2.1689 23 1 0.1397 -1.3802 -1.9102 24 6 1.5762 -1.1888 -3.4889 25 7 2.6869 -0.5877 -3.8600 26 14 0.5685 -2.1437 -4.7388 27 1 -0.4254 -1.2381 -5.3691 28 1 1.4687 -2.6945 -5.7835 29 1 -0.1389 -3.2574 -4.0574 30 1 -0.3633 0.5083 0.8931 31 1 -0.3633 0.5194 -0.8868 32 1 -0.3633 -1.0276 -0.0065 33 1 1.5100 0.9814 2.3840 34 1 0.9254 2.3073 4.1059 35 1 1.1418 -1.3680 6.3947 36 1 -0.5755 0.1693 8.5245 37 1 1.1666 -0.0644 8.8197 38 1 1.5364 2.3304 8.9409 39 1 0.1632 1.9470 10.0058 40 1 -0.4639 3.8915 8.7103 41 1 -1.3737 2.5105 8.0502 42 1 1.1491 3.7927 6.9077 43 1 -0.4629 3.7015 6.1522 44 1 4.0061 0.1474 1.0994 45 1 3.9378 -1.3448 2.0669 46 1 5.0412 -1.7696 -0.1037 47 1 3.4982 -2.6528 -0.0053 48 1 3.9903 0.0021 -1.4317 49 1 3.6518 -1.5716 -2.1972 50 1 2.9819 -0.6405 -4.7826 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000994570840.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 02:58:33 Heat of formation + Delta-G solvation = 18.396233 kcal Electronic energy + Delta-G solvation = -28820.436277 eV Core-core repulsion = 25041.069410 eV Total energy + Delta-G solvation = -3779.366867 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 331.200 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -41.66452 -39.26950 -37.42278 -36.07887 -34.10323 -33.04794 -32.41950 -31.54543 -29.96714 -28.81369 -27.68820 -26.15442 -24.98999 -24.63870 -22.98336 -21.86080 -21.36304 -20.56945 -19.62248 -19.22144 -18.56921 -17.42783 -16.31871 -16.12996 -15.85946 -15.46373 -14.78892 -14.66708 -14.48653 -14.29328 -13.97609 -13.84666 -13.73425 -13.62221 -13.36699 -13.20017 -12.86829 -12.64982 -12.43754 -12.26453 -11.85959 -11.58218 -11.55739 -11.44567 -11.38386 -11.24157 -10.99985 -10.85890 -10.66808 -10.47371 -10.18231 -10.02120 -9.96572 -9.76276 -9.45699 -9.23346 -8.71198 -8.47899 -8.36958 -8.17028 -6.58525 -5.73341 -3.17227 1.86128 2.31658 2.58176 3.41292 3.48434 3.51321 3.77300 3.87174 4.05602 4.18866 4.26981 4.46295 4.55967 4.77410 4.85417 4.96391 4.99817 5.19626 5.26446 5.29254 5.38722 5.39327 5.42102 5.51096 5.53463 5.64415 5.69931 5.74902 5.82740 5.92148 6.07460 6.10214 6.22572 6.33350 6.46997 6.53402 6.65687 6.72155 6.75997 6.84914 6.90113 6.92910 7.01303 7.10512 7.11645 7.22307 7.48268 7.73731 7.88115 8.07040 8.51281 8.76590 9.27016 9.89962 10.47145 11.35446 Molecular weight = 331.20amu Principal moments of inertia in cm(-1) A = 0.025336 B = 0.002418 C = 0.002348 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1104.885493 B =11577.250629 C =11922.406702 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C 0.168 3.832 3 H 0.027 0.973 4 C 0.133 3.867 5 H 0.084 0.916 6 N -0.714 5.714 7 C 0.588 3.412 8 O -0.559 6.559 9 C -0.225 4.225 10 C -0.164 4.164 11 C 0.012 3.988 12 N -0.445 5.445 13 C 0.073 3.927 14 C 0.102 3.898 15 C -0.134 4.134 16 C -0.125 4.125 17 C -0.052 4.052 18 C -0.116 4.116 19 C -0.140 4.140 20 C 0.170 3.830 21 N -0.583 5.583 22 C -0.249 4.249 23 H 0.069 0.931 24 C 0.003 3.997 25 N -0.903 5.903 26 Si 0.901 3.099 27 H -0.288 1.288 28 H -0.290 1.290 29 H -0.279 1.279 30 H 0.039 0.961 31 H 0.062 0.938 32 H 0.054 0.946 33 H 0.395 0.605 34 H 0.145 0.855 35 H 0.172 0.828 36 H 0.082 0.918 37 H 0.089 0.911 38 H 0.074 0.926 39 H 0.085 0.915 40 H 0.075 0.925 41 H 0.068 0.932 42 H 0.080 0.920 43 H 0.086 0.914 44 H 0.052 0.948 45 H 0.049 0.951 46 H 0.050 0.950 47 H 0.056 0.944 48 H 0.019 0.981 49 H 0.086 0.914 50 H 0.253 0.747 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.932 8.145 26.064 27.589 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.194 4.194 2 C 0.060 3.940 3 H 0.044 0.956 4 C 0.027 3.973 5 H 0.103 0.897 6 N -0.363 5.363 7 C 0.376 3.624 8 O -0.439 6.439 9 C -0.235 4.235 10 C -0.188 4.188 11 C -0.095 4.095 12 N -0.122 5.122 13 C -0.062 4.062 14 C -0.019 4.019 15 C -0.171 4.171 16 C -0.163 4.163 17 C -0.089 4.089 18 C -0.155 4.155 19 C -0.180 4.180 20 C 0.045 3.955 21 N -0.306 5.306 22 C -0.379 4.379 23 H 0.087 0.913 24 C -0.196 4.196 25 N -0.547 5.547 26 Si 0.730 3.270 27 H -0.215 1.215 28 H -0.216 1.216 29 H -0.205 1.205 30 H 0.058 0.942 31 H 0.081 0.919 32 H 0.073 0.927 33 H 0.228 0.772 34 H 0.162 0.838 35 H 0.189 0.811 36 H 0.100 0.900 37 H 0.107 0.893 38 H 0.093 0.907 39 H 0.103 0.897 40 H 0.094 0.906 41 H 0.087 0.913 42 H 0.098 0.902 43 H 0.105 0.895 44 H 0.071 0.929 45 H 0.068 0.932 46 H 0.069 0.931 47 H 0.074 0.926 48 H 0.037 0.963 49 H 0.104 0.896 50 H 0.063 0.937 Dipole moment (debyes) X Y Z Total from point charges -3.792 7.278 26.264 27.517 hybrid contribution -0.428 -0.080 -0.719 0.840 sum -4.220 7.199 25.545 26.874 Atomic orbital electron populations 1.21810 0.95718 1.01672 1.00161 1.20562 0.93210 0.93525 0.86665 0.95570 1.21719 0.94889 0.96822 0.83841 0.89749 1.45896 1.70203 1.12065 1.08094 1.17347 0.76359 0.86308 0.82396 1.90751 1.52250 1.14840 1.86034 1.20433 1.15584 0.93908 0.93548 1.21668 1.07264 0.94500 0.95350 1.20259 1.09631 0.88110 0.91526 1.43896 1.53481 1.07081 1.07783 1.21638 1.01931 0.93288 0.89354 1.22062 1.02662 0.99267 0.77905 1.21846 1.01769 0.93575 0.99951 1.21638 0.99126 0.99881 0.95652 1.20354 1.01246 0.91592 0.95751 1.21760 0.95639 0.99920 0.98196 1.22183 0.99101 0.99738 0.96971 1.20817 0.83160 0.97117 0.94410 1.44036 1.03117 1.65148 1.18283 1.19154 0.95161 1.37548 0.86005 0.91291 1.25081 0.97916 0.99605 0.96950 1.70036 1.24118 1.43922 1.16628 0.86326 0.79375 0.80028 0.81227 1.21460 1.21633 1.20466 0.94191 0.91908 0.92723 0.77159 0.83768 0.81077 0.89986 0.89299 0.90683 0.89651 0.90638 0.91319 0.90177 0.89546 0.92877 0.93204 0.93127 0.92556 0.96334 0.89557 0.93733 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.66 7.84 37.16 0.29 -2.37 16 2 C 0.17 3.54 3.03 -67.60 -0.20 3.34 16 3 H 0.03 0.56 8.14 -51.93 -0.42 0.14 16 4 C 0.13 2.59 1.99 -67.81 -0.14 2.46 16 5 H 0.08 1.89 7.58 -51.93 -0.39 1.49 16 6 N -0.71 -11.77 4.57 -54.81 -0.25 -12.02 16 7 C 0.59 10.22 7.77 -12.59 -0.10 10.12 16 8 O -0.56 -11.69 16.58 5.25 0.09 -11.60 16 9 C -0.22 -3.19 6.29 -103.32 -0.65 -3.84 16 10 C -0.16 -1.91 10.47 -37.61 -0.39 -2.30 16 11 C 0.01 0.12 6.53 -81.52 -0.53 -0.41 16 12 N -0.45 -4.28 3.11 -111.87 -0.35 -4.63 16 13 C 0.07 0.88 11.18 -16.88 -0.19 0.69 16 14 C 0.10 0.59 6.89 -3.68 -0.03 0.57 16 15 C -0.13 -0.58 5.91 -26.59 -0.16 -0.74 16 16 C -0.13 -0.60 5.96 -26.46 -0.16 -0.76 16 17 C -0.05 -0.34 6.26 -27.49 -0.17 -0.51 16 18 C -0.12 -2.25 5.46 -26.69 -0.15 -2.39 16 19 C -0.14 -2.90 6.08 -26.61 -0.16 -3.06 16 20 C 0.17 4.16 5.28 -3.71 -0.02 4.14 16 21 N -0.58 -14.63 2.99 -164.77 -0.49 -15.12 16 22 C -0.25 -6.78 8.58 -15.06 -0.13 -6.91 16 23 H 0.07 1.85 6.23 -52.49 -0.33 1.52 16 24 C 0.00 0.08 4.94 -17.43 -0.09 0.00 16 25 N -0.90 -26.23 11.23 55.49 0.62 -25.61 16 26 Si 0.90 21.90 29.58 -169.99 -5.03 16.88 16 27 H -0.29 -6.97 7.11 56.52 0.40 -6.57 16 28 H -0.29 -7.11 7.11 56.52 0.40 -6.71 16 29 H -0.28 -6.72 7.11 56.52 0.40 -6.32 16 30 H 0.04 0.66 7.78 -51.93 -0.40 0.25 16 31 H 0.06 1.29 7.67 -51.93 -0.40 0.89 16 32 H 0.05 1.12 7.40 -51.93 -0.38 0.74 16 33 H 0.39 5.56 7.72 -40.82 -0.32 5.25 16 34 H 0.14 1.44 7.69 -52.49 -0.40 1.04 16 35 H 0.17 1.89 8.06 -52.49 -0.42 1.46 16 36 H 0.08 0.40 8.14 -51.92 -0.42 -0.02 16 37 H 0.09 0.41 8.14 -51.93 -0.42 -0.01 16 38 H 0.07 0.37 8.11 -51.93 -0.42 -0.05 16 39 H 0.08 0.21 8.14 -51.93 -0.42 -0.21 16 40 H 0.07 0.26 8.14 -51.93 -0.42 -0.16 16 41 H 0.07 0.36 8.12 -51.93 -0.42 -0.06 16 42 H 0.08 0.47 8.14 -51.93 -0.42 0.04 16 43 H 0.09 0.50 8.14 -51.93 -0.42 0.08 16 44 H 0.05 0.99 8.14 -51.93 -0.42 0.56 16 45 H 0.05 0.96 8.14 -51.93 -0.42 0.54 16 46 H 0.05 0.94 8.14 -51.93 -0.42 0.52 16 47 H 0.06 1.21 8.14 -51.93 -0.42 0.79 16 48 H 0.02 0.47 8.14 -51.93 -0.42 0.05 16 49 H 0.09 2.34 6.15 -51.93 -0.32 2.02 16 50 H 0.25 7.12 8.31 -40.82 -0.34 6.78 16 LS Contribution 388.38 15.07 5.85 5.85 Total: -1.00 -33.25 388.38 -10.94 -44.19 By element: Atomic # 1 Polarization: 12.47 SS G_CDS: -8.42 Total: 4.05 kcal Atomic # 6 Polarization: 0.99 SS G_CDS: -2.97 Total: -1.98 kcal Atomic # 7 Polarization: -56.92 SS G_CDS: -0.47 Total: -57.38 kcal Atomic # 8 Polarization: -11.69 SS G_CDS: 0.09 Total: -11.60 kcal Atomic # 14 Polarization: 21.90 SS G_CDS: -5.03 Total: 16.88 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -33.25 -10.94 -44.19 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000994570840.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 62.583 kcal (2) G-P(sol) polarization free energy of solvation -33.246 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.337 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.941 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.187 kcal (6) G-S(sol) free energy of system = (1) + (5) 18.396 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds