Wall clock time and date at job start Sat Apr 11 2020 04:37:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46904 * 1 3 3 C 1.50413 * 111.31195 * 2 1 4 4 C 1.54910 * 103.48223 * 159.28750 * 3 2 1 5 5 C 1.54417 * 102.98371 * 322.20659 * 4 3 2 6 6 H 1.08992 * 112.27177 * 260.04033 * 5 4 3 7 7 C 1.54238 * 109.46107 * 134.65561 * 5 4 3 8 8 N 1.48557 * 104.54969 * 222.94185 * 7 5 4 9 9 C 1.46907 * 110.99806 * 159.54858 * 8 7 5 10 10 C 1.50697 * 109.47204 * 53.96822 * 9 8 7 11 11 C 1.38103 * 120.02990 * 253.43504 * 10 9 8 12 12 C 1.38387 * 120.05665 * 180.02562 * 11 10 9 13 13 Cl 1.73600 * 119.94684 * 179.97438 * 12 11 10 14 14 C 1.38433 * 120.11236 * 359.97438 * 12 11 10 15 15 C 1.38078 * 120.05288 * 359.68084 * 14 12 11 16 16 C 1.38862 * 120.02310 * 73.41766 * 10 9 8 17 17 O 1.35759 * 120.05742 * 0.02562 * 16 10 9 18 18 C 1.34823 * 117.00111 * 182.27993 * 17 16 10 19 19 H 1.07999 * 120.00031 * 355.10004 * 18 17 16 20 20 C 1.38648 * 120.00290 * 175.37280 * 18 17 16 21 21 N 1.31564 * 120.00110 * 179.72560 * 20 18 17 22 22 Si 1.86802 * 119.99692 * 359.72856 * 20 18 17 23 23 H 1.48503 * 109.47060 * 90.00140 * 22 20 18 24 24 H 1.48501 * 109.46848 * 209.99732 * 22 20 18 25 25 H 1.48497 * 109.47381 * 329.99954 * 22 20 18 26 26 C 1.48489 * 104.21052 * 39.99833 * 8 7 5 27 27 C 1.47888 * 110.99751 * 116.62112 * 2 1 3 28 28 H 1.09003 * 111.76374 * 337.86330 * 27 2 1 29 29 H 1.08992 * 109.47165 * 303.37432 * 1 2 3 30 30 H 1.08996 * 109.46797 * 63.38030 * 1 2 3 31 31 H 1.09002 * 109.46529 * 183.37218 * 1 2 3 32 32 H 1.09010 * 110.54794 * 40.77053 * 3 2 1 33 33 H 1.08994 * 110.68519 * 277.87901 * 3 2 1 34 34 H 1.08994 * 110.71560 * 203.83176 * 4 3 2 35 35 H 1.09001 * 110.70700 * 80.57437 * 4 3 2 36 36 H 1.09002 * 110.41855 * 104.17125 * 7 5 4 37 37 H 1.09001 * 110.41466 * 341.70948 * 7 5 4 38 38 H 1.09008 * 109.46570 * 293.97377 * 9 8 7 39 39 H 1.08998 * 109.46885 * 173.97948 * 9 8 7 40 40 H 1.07998 * 119.97744 * 359.97438 * 11 10 9 41 41 H 1.08002 * 119.97470 * 179.97438 * 14 12 11 42 42 H 1.07995 * 120.02800 * 180.31878 * 15 14 12 43 43 H 0.97002 * 119.99968 * 180.02562 * 21 20 18 44 44 H 1.08997 * 110.37663 * 79.49501 * 26 8 7 45 45 H 1.09004 * 110.37289 * 201.82495 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 2.0157 1.4013 0.0000 4 6 3.4597 1.2256 0.5328 5 6 3.3006 0.1334 1.6127 6 1 3.2618 0.5500 2.6191 7 6 4.4237 -0.9120 1.4556 8 7 3.7423 -2.2207 1.6285 9 6 4.5372 -3.3093 1.0442 10 6 5.9305 -3.2776 1.6176 11 6 6.9862 -2.8364 0.8443 12 6 8.2660 -2.8075 1.3701 13 17 9.5911 -2.2529 0.3952 14 6 8.4913 -3.2202 2.6721 15 6 7.4381 -3.6555 3.4516 16 6 6.1537 -3.6918 2.9241 17 8 5.1176 -4.1261 3.6862 18 6 5.3962 -4.4687 4.9600 19 1 6.4184 -4.4670 5.3085 20 6 4.3709 -4.8287 5.8212 21 7 4.6434 -5.1682 7.0628 22 14 2.6028 -4.8316 5.2186 23 1 2.2713 -6.1685 4.6636 24 1 1.6931 -4.5268 6.3520 25 1 2.4385 -3.8020 4.1612 26 6 2.4531 -2.0582 0.9099 27 6 1.9990 -0.6187 1.2343 28 1 1.2683 -0.5973 2.0429 29 1 -0.3633 0.5653 0.8581 30 1 -0.3633 0.4605 -0.9187 31 1 -0.3632 -1.0259 0.0605 32 1 1.4346 2.0387 0.6666 33 1 2.0254 1.8107 -1.0100 34 1 3.8235 2.1536 0.9738 35 1 4.1252 0.8881 -0.2617 36 1 5.1825 -0.7735 2.2258 37 1 4.8705 -0.8439 0.4637 38 1 4.5864 -3.1830 -0.0374 39 1 4.0698 -4.2660 1.2774 40 1 6.8131 -2.5143 -0.1719 41 1 9.4911 -3.1972 3.0800 42 1 7.6136 -3.9725 4.4690 43 1 3.9261 -5.4204 7.6651 44 1 2.5995 -2.1770 -0.1637 45 1 1.7213 -2.7784 1.2758 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000831723148.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 04:37:08 Heat of formation + Delta-G solvation = 14.416239 kcal Electronic energy + Delta-G solvation = -27577.213497 eV Core-core repulsion = 23814.375401 eV Total energy + Delta-G solvation = -3762.838096 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 336.135 amu Computer time = 2.24 seconds Orbital eigenvalues (eV) -40.19919 -39.31614 -37.01048 -36.35102 -35.46742 -32.72395 -32.41556 -31.53694 -29.31859 -28.55827 -27.79833 -25.41123 -24.94588 -24.76417 -21.77743 -21.53660 -21.22461 -20.24205 -19.50432 -17.96263 -17.19036 -16.59821 -15.78866 -15.41024 -15.28114 -14.78075 -14.65125 -14.26591 -14.11094 -13.90173 -13.65114 -13.62324 -13.06955 -13.00246 -12.72585 -12.53229 -12.45989 -12.29688 -11.99620 -11.75593 -11.62817 -11.47381 -11.20547 -11.07095 -10.96178 -10.92030 -10.86547 -10.65368 -10.58282 -10.44994 -10.33219 -10.11850 -9.43815 -8.88423 -8.65877 -8.39367 -8.01868 -7.34582 -6.47174 -4.12219 1.86277 1.99941 2.74735 3.23716 3.26709 3.49790 3.76059 4.18611 4.25073 4.35693 4.46941 4.72486 4.74928 4.79297 5.06511 5.08517 5.12164 5.24347 5.25445 5.34899 5.36814 5.41589 5.45140 5.55046 5.61719 5.67429 5.72664 5.76699 5.89072 5.94061 5.96207 6.03591 6.08052 6.12260 6.14563 6.29323 6.34334 6.55561 6.65690 6.78387 6.84296 6.90022 7.07328 7.21899 7.38045 7.41276 7.69719 7.94725 8.88022 9.49122 10.59233 Molecular weight = 336.13amu Principal moments of inertia in cm(-1) A = 0.007410 B = 0.005576 C = 0.003416 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3777.828470 B = 5020.342937 C = 8193.845925 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 N -0.515 5.515 3 C 0.032 3.968 4 C -0.118 4.118 5 C -0.100 4.100 6 H 0.089 0.911 7 C 0.051 3.949 8 N -0.494 5.494 9 C 0.109 3.891 10 C -0.154 4.154 11 C -0.057 4.057 12 C -0.122 4.122 13 Cl -0.106 7.106 14 C -0.059 4.059 15 C -0.218 4.218 16 C 0.183 3.817 17 O -0.186 6.186 18 C -0.389 4.389 19 H 0.106 0.894 20 C 0.069 3.931 21 N -0.875 5.875 22 Si 0.895 3.105 23 H -0.276 1.276 24 H -0.286 1.286 25 H -0.239 1.239 26 C 0.047 3.953 27 C 0.061 3.939 28 H 0.068 0.932 29 H 0.027 0.973 30 H 0.067 0.933 31 H 0.069 0.931 32 H 0.045 0.955 33 H 0.080 0.920 34 H 0.072 0.928 35 H 0.076 0.924 36 H 0.080 0.920 37 H 0.044 0.956 38 H 0.036 0.964 39 H 0.083 0.917 40 H 0.119 0.881 41 H 0.119 0.881 42 H 0.141 0.859 43 H 0.280 0.720 44 H 0.055 0.945 45 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.385 10.340 -13.293 17.178 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 N -0.239 5.239 3 C -0.095 4.095 4 C -0.156 4.156 5 C -0.120 4.120 6 H 0.107 0.893 7 C -0.077 4.077 8 N -0.218 5.218 9 C -0.019 4.019 10 C -0.156 4.156 11 C -0.077 4.077 12 C -0.149 4.149 13 Cl -0.078 7.078 14 C -0.078 4.078 15 C -0.237 4.237 16 C 0.128 3.872 17 O -0.088 6.088 18 C -0.465 4.465 19 H 0.123 0.877 20 C -0.135 4.135 21 N -0.511 5.511 22 Si 0.720 3.280 23 H -0.202 1.202 24 H -0.212 1.212 25 H -0.162 1.162 26 C -0.082 4.082 27 C -0.048 4.048 28 H 0.087 0.913 29 H 0.045 0.955 30 H 0.085 0.915 31 H 0.088 0.912 32 H 0.064 0.936 33 H 0.098 0.902 34 H 0.091 0.909 35 H 0.095 0.905 36 H 0.099 0.901 37 H 0.063 0.937 38 H 0.054 0.946 39 H 0.101 0.899 40 H 0.137 0.863 41 H 0.137 0.863 42 H 0.159 0.841 43 H 0.090 0.910 44 H 0.073 0.927 45 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -3.568 9.816 -13.098 16.753 hybrid contribution -0.657 0.505 -0.077 0.832 sum -4.225 10.321 -13.176 17.262 Atomic orbital electron populations 1.22509 0.88110 1.02089 1.00626 1.65489 1.07912 1.14807 1.35721 1.23598 0.95203 0.89843 1.00846 1.22589 0.96298 0.98636 0.98081 1.22720 0.94620 0.95410 0.99204 0.89281 1.23076 0.95884 0.88474 1.00299 1.65532 1.02646 1.02835 1.50742 1.20841 0.90387 0.95855 0.94782 1.18634 0.94549 1.09334 0.93105 1.20368 0.90148 0.98468 0.98721 1.20270 0.88055 1.13204 0.93387 1.98283 1.48664 1.89139 1.71677 1.20682 0.98867 0.96597 0.91639 1.21229 0.91925 1.08591 1.01960 1.18842 0.87302 0.90885 0.90148 1.83655 1.31360 1.70271 1.23512 1.20795 0.96956 1.45514 0.83206 0.87685 1.24454 0.99921 0.95153 0.94021 1.69653 1.34448 1.42617 1.04394 0.86287 0.82131 0.80117 0.79471 1.20181 1.21172 1.16173 1.23059 0.92789 0.95169 0.97171 1.23180 0.96047 0.94914 0.90648 0.91347 0.95456 0.91457 0.91214 0.93642 0.90206 0.90930 0.90517 0.90122 0.93747 0.94599 0.89861 0.86298 0.86305 0.84120 0.90977 0.92696 0.90767 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.15 9.44 60.07 0.57 0.72 16 2 N -0.52 -5.89 5.11 -227.62 -1.16 -7.05 16 3 C 0.03 0.32 6.62 -0.84 -0.01 0.31 16 4 C -0.12 -1.23 6.62 -24.98 -0.17 -1.39 16 5 C -0.10 -1.29 3.99 -88.17 -0.35 -1.64 16 6 H 0.09 1.17 8.14 -51.93 -0.42 0.75 16 7 C 0.05 0.76 4.97 -2.26 -0.01 0.75 16 8 N -0.49 -8.37 5.48 -231.55 -1.27 -9.64 16 9 C 0.11 1.84 4.81 -4.97 -0.02 1.82 16 10 C -0.15 -2.84 4.21 -104.44 -0.44 -3.28 16 11 C -0.06 -0.95 9.27 -39.58 -0.37 -1.32 16 12 C -0.12 -2.05 6.32 -39.45 -0.25 -2.30 16 13 Cl -0.11 -1.56 28.95 -51.86 -1.50 -3.07 16 14 C -0.06 -1.04 9.82 -39.57 -0.39 -1.43 16 15 C -0.22 -4.44 9.17 -39.40 -0.36 -4.80 16 16 C 0.18 3.94 6.63 -39.11 -0.26 3.68 16 17 O -0.19 -4.56 7.95 0.04 0.00 -4.56 16 18 C -0.39 -10.44 9.94 30.88 0.31 -10.13 16 19 H 0.11 2.88 5.43 -52.49 -0.28 2.60 16 20 C 0.07 1.87 5.49 -17.51 -0.10 1.77 16 21 N -0.87 -24.61 13.96 55.48 0.77 -23.83 16 22 Si 0.90 21.01 28.62 -169.99 -4.86 16.14 16 23 H -0.28 -6.42 7.11 56.52 0.40 -6.02 16 24 H -0.29 -6.58 7.11 56.52 0.40 -6.18 16 25 H -0.24 -5.61 7.11 56.52 0.40 -5.21 16 26 C 0.05 0.68 6.18 -2.21 -0.01 0.67 16 27 C 0.06 0.80 3.43 -65.38 -0.22 0.58 16 28 H 0.07 0.93 7.81 -51.93 -0.41 0.52 16 29 H 0.03 0.25 8.06 -51.93 -0.42 -0.17 16 30 H 0.07 0.56 8.14 -51.93 -0.42 0.13 16 31 H 0.07 0.66 8.14 -51.93 -0.42 0.24 16 32 H 0.05 0.42 7.99 -51.92 -0.41 0.01 16 33 H 0.08 0.70 8.14 -51.93 -0.42 0.28 16 34 H 0.07 0.66 8.14 -51.93 -0.42 0.24 16 35 H 0.08 0.82 7.23 -51.93 -0.38 0.45 16 36 H 0.08 1.36 7.90 -51.93 -0.41 0.95 16 37 H 0.04 0.63 7.09 -51.93 -0.37 0.27 16 38 H 0.04 0.53 7.65 -51.92 -0.40 0.14 16 39 H 0.08 1.51 8.05 -51.93 -0.42 1.09 16 40 H 0.12 1.73 7.99 -52.49 -0.42 1.31 16 41 H 0.12 1.86 8.06 -52.49 -0.42 1.44 16 42 H 0.14 3.01 5.62 -52.49 -0.29 2.72 16 43 H 0.28 7.33 8.31 -40.82 -0.34 6.99 16 44 H 0.05 0.78 7.63 -51.93 -0.40 0.38 16 45 H 0.07 1.11 8.14 -51.93 -0.42 0.69 16 LS Contribution 371.99 15.07 5.61 5.61 Total: -1.00 -27.60 371.99 -11.20 -38.79 By element: Atomic # 1 Polarization: 10.29 SS G_CDS: -6.70 Total: 3.59 kcal Atomic # 6 Polarization: -13.91 SS G_CDS: -2.08 Total: -15.99 kcal Atomic # 7 Polarization: -38.86 SS G_CDS: -1.66 Total: -40.52 kcal Atomic # 8 Polarization: -4.56 SS G_CDS: 0.00 Total: -4.56 kcal Atomic # 14 Polarization: 21.01 SS G_CDS: -4.86 Total: 16.14 kcal Atomic # 17 Polarization: -1.56 SS G_CDS: -1.50 Total: -3.07 kcal Total LS contribution 5.61 Total: 5.61 kcal Total: -27.60 -11.20 -38.79 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000831723148.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.210 kcal (2) G-P(sol) polarization free energy of solvation -27.596 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.615 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.198 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.794 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.416 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.24 seconds