Wall clock time and date at job start Sat Apr 11 2020 05:40:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 N 1.46503 * 109.47030 * 2 1 4 4 C 1.35629 * 125.67742 * 265.15515 * 3 2 1 5 5 C 1.35516 * 108.85529 * 180.02562 * 4 3 2 6 6 Cl 1.73591 * 126.07557 * 180.02562 * 5 4 3 7 7 C 1.39890 * 107.84853 * 359.77453 * 5 4 3 8 8 C 1.37635 * 125.67449 * 85.19694 * 3 2 1 9 9 C 1.46670 * 126.22389 * 359.92732 * 8 3 2 10 10 O 1.21691 * 120.00205 * 8.61270 * 9 8 3 11 11 N 1.34777 * 119.99909 * 188.60663 * 9 8 3 12 12 C 1.47490 * 127.03401 * 358.84307 * 11 9 8 13 13 C 1.54002 * 107.08392 * 154.29071 * 12 11 9 14 14 H 1.09006 * 110.32631 * 242.31758 * 13 12 11 15 15 C 1.52996 * 110.32968 * 120.19995 * 13 12 11 16 16 C 1.54618 * 105.04318 * 1.30317 * 13 12 11 17 17 H 1.08997 * 110.74166 * 263.33014 * 16 13 12 18 18 C 1.53007 * 110.73621 * 140.18998 * 16 13 12 19 19 N 1.46499 * 109.46802 * 175.00274 * 18 16 13 20 20 C 1.36944 * 119.99577 * 179.97438 * 19 18 16 21 21 H 1.07997 * 119.99655 * 359.97438 * 20 19 18 22 22 C 1.38812 * 119.99710 * 179.97438 * 20 19 18 23 23 N 1.31619 * 119.99581 * 179.97438 * 22 20 19 24 24 Si 1.86797 * 120.00226 * 359.97438 * 22 20 19 25 25 H 1.48506 * 109.47229 * 89.99898 * 24 22 20 26 26 H 1.48493 * 109.47239 * 210.00270 * 24 22 20 27 27 H 1.48505 * 109.46887 * 329.99948 * 24 22 20 28 28 C 1.48118 * 127.03572 * 178.52825 * 11 9 8 29 29 H 1.09005 * 109.47070 * 295.01704 * 1 2 3 30 30 H 1.08998 * 109.46937 * 55.01286 * 1 2 3 31 31 H 1.08998 * 109.47563 * 175.01695 * 1 2 3 32 32 H 1.09000 * 109.47084 * 240.00119 * 2 1 3 33 33 H 1.09000 * 109.46845 * 119.99972 * 2 1 3 34 34 H 1.08003 * 125.57260 * 0.02562 * 4 3 2 35 35 H 1.07995 * 126.45209 * 180.23364 * 7 5 4 36 36 H 1.08998 * 109.91176 * 273.65443 * 12 11 9 37 37 H 1.09004 * 109.90962 * 34.73736 * 12 11 9 38 38 H 1.09005 * 109.46653 * 61.45280 * 15 13 12 39 39 H 1.08997 * 109.47103 * 181.45365 * 15 13 12 40 40 H 1.08994 * 109.46942 * 301.45573 * 15 13 12 41 41 H 1.08999 * 109.46820 * 295.00255 * 18 16 13 42 42 H 1.08997 * 109.47109 * 55.00148 * 18 16 13 43 43 H 0.97003 * 120.00313 * 359.97438 * 19 18 16 44 44 H 0.97002 * 119.99519 * 179.97438 * 23 22 20 45 45 H 1.09004 * 110.65725 * 337.99537 * 28 11 9 46 46 H 1.09000 * 110.66199 * 101.11190 * 28 11 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3813 0.0000 4 6 2.3697 2.0960 -1.0978 5 6 2.7714 3.3299 -0.7070 6 17 3.3159 4.6058 -1.7504 7 6 2.6638 3.3945 0.6863 8 6 2.1976 2.1692 1.1141 9 6 1.9343 1.7790 2.5032 10 8 1.6679 0.6220 2.7702 11 7 1.9874 2.7018 3.4841 12 6 2.3163 4.1324 3.3409 13 6 1.6416 4.8711 4.5117 14 1 0.9081 5.5849 4.1367 15 6 2.6913 5.5872 5.3639 16 6 0.9444 3.7644 5.3361 17 1 -0.1077 3.6842 5.0626 18 6 1.0935 4.0304 6.8354 19 7 0.3247 3.0351 7.5867 20 6 0.3084 3.0732 8.9555 21 1 0.8627 3.8367 9.4811 22 6 -0.4205 2.1305 9.6675 23 7 -0.4357 2.1668 10.9831 24 14 -1.3798 0.8104 8.7584 25 1 -0.5137 -0.3784 8.5535 26 1 -2.5698 0.4240 9.5581 27 1 -1.8185 1.3363 7.4406 28 6 1.7210 2.4882 4.9254 29 1 -0.3633 0.4346 0.9313 30 1 -0.3633 0.5893 -0.8419 31 1 -0.3634 -1.0237 -0.0893 32 1 1.8933 -0.5138 -0.8900 33 1 1.8933 -0.5138 0.8900 34 1 2.3351 1.7400 -2.1169 35 1 2.9031 4.2433 1.3097 36 1 3.3964 4.2714 3.3872 37 1 1.9342 4.5080 2.3916 38 1 3.2095 6.3283 4.7551 39 1 2.2019 6.0834 6.2020 40 1 3.4102 4.8602 5.7415 41 1 2.1452 3.9628 7.1135 42 1 0.7201 5.0280 7.0663 43 1 -0.1729 2.3492 7.1147 44 1 -0.9454 1.5083 11.4805 45 1 1.1077 1.5997 5.0755 46 1 2.6551 2.4106 5.4817 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001699969985.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 05:40:23 Heat of formation + Delta-G solvation = 33.601519 kcal Electronic energy + Delta-G solvation = -27613.823885 eV Core-core repulsion = 23759.080335 eV Total energy + Delta-G solvation = -3854.743550 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 339.145 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -41.90316 -39.93743 -37.96968 -36.69740 -35.08354 -34.32074 -32.95451 -31.40628 -30.44730 -29.54822 -28.86483 -26.82392 -25.57459 -24.10101 -23.48575 -22.01321 -21.44703 -21.10552 -19.44691 -19.25428 -17.74141 -17.12770 -16.73735 -16.00877 -15.70365 -15.46413 -14.97652 -14.74856 -14.73265 -14.41876 -14.09523 -13.74736 -13.57098 -13.21966 -13.15230 -12.99739 -12.91572 -12.59643 -12.47823 -12.43660 -12.23087 -11.93198 -11.72228 -11.62442 -11.57902 -11.22989 -11.12480 -10.91872 -10.57470 -10.48658 -10.30637 -10.07510 -10.03476 -9.58909 -9.02247 -8.91028 -8.84561 -8.50815 -7.23581 -5.76931 -3.12633 1.12868 1.78934 2.13074 2.39563 3.06888 3.12108 3.39106 3.42682 3.47056 4.20342 4.34442 4.49258 4.51290 4.59939 4.66904 4.69543 4.76120 4.86859 4.95076 5.13990 5.17096 5.30160 5.34415 5.34961 5.45572 5.47454 5.54575 5.59738 5.63079 5.70071 5.76674 5.77363 5.90404 5.99530 6.06400 6.10388 6.16254 6.24791 6.35119 6.46387 6.61380 6.70660 6.72123 7.39794 7.98289 7.98858 8.42017 9.20807 9.93454 10.12463 11.41405 Molecular weight = 339.15amu Principal moments of inertia in cm(-1) A = 0.015215 B = 0.002919 C = 0.002510 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1839.904998 B = 9591.303253 C =11152.606811 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C 0.093 3.907 3 N -0.399 5.399 4 C 0.031 3.969 5 C -0.123 4.123 6 Cl -0.051 7.051 7 C -0.144 4.144 8 C -0.025 4.025 9 C 0.604 3.396 10 O -0.545 6.545 11 N -0.606 5.606 12 C 0.089 3.911 13 C -0.097 4.097 14 H 0.085 0.915 15 C -0.147 4.147 16 C -0.108 4.108 17 H 0.082 0.918 18 C 0.169 3.831 19 N -0.758 5.758 20 C -0.244 4.244 21 H 0.091 0.909 22 C 0.005 3.995 23 N -0.934 5.934 24 Si 0.882 3.118 25 H -0.283 1.283 26 H -0.291 1.291 27 H -0.277 1.277 28 C 0.117 3.883 29 H 0.067 0.933 30 H 0.059 0.941 31 H 0.078 0.922 32 H 0.092 0.908 33 H 0.113 0.887 34 H 0.176 0.824 35 H 0.166 0.834 36 H 0.075 0.925 37 H 0.088 0.912 38 H 0.053 0.947 39 H 0.070 0.930 40 H 0.061 0.939 41 H 0.035 0.965 42 H 0.033 0.967 43 H 0.360 0.640 44 H 0.259 0.741 45 H 0.085 0.915 46 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.209 3.064 -28.486 29.544 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.223 4.223 2 C -0.027 4.027 3 N -0.072 5.072 4 C -0.106 4.106 5 C -0.156 4.156 6 Cl -0.023 7.023 7 C -0.170 4.170 8 C -0.139 4.139 9 C 0.393 3.607 10 O -0.425 6.425 11 N -0.338 5.338 12 C -0.034 4.034 13 C -0.117 4.117 14 H 0.103 0.897 15 C -0.205 4.205 16 C -0.128 4.128 17 H 0.101 0.899 18 C 0.041 3.959 19 N -0.403 5.403 20 C -0.374 4.374 21 H 0.108 0.892 22 C -0.190 4.190 23 N -0.582 5.582 24 Si 0.713 3.287 25 H -0.210 1.210 26 H -0.217 1.217 27 H -0.204 1.204 28 C -0.004 4.004 29 H 0.086 0.914 30 H 0.078 0.922 31 H 0.096 0.904 32 H 0.110 0.890 33 H 0.131 0.869 34 H 0.194 0.806 35 H 0.183 0.817 36 H 0.093 0.907 37 H 0.106 0.894 38 H 0.072 0.928 39 H 0.089 0.911 40 H 0.080 0.920 41 H 0.053 0.947 42 H 0.051 0.949 43 H 0.193 0.807 44 H 0.069 0.931 45 H 0.104 0.896 46 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 7.025 2.165 -28.227 29.169 hybrid contribution -0.703 -0.825 -0.754 1.320 sum 6.322 1.339 -28.981 29.692 Atomic orbital electron populations 1.22095 0.93675 1.03280 1.03210 1.22191 0.96237 0.78706 1.05538 1.44037 1.46523 1.11989 1.04684 1.21707 1.05040 0.91550 0.92299 1.19928 1.12784 0.91304 0.91616 1.98325 1.88862 1.49317 1.65799 1.21849 1.04679 0.97078 0.93381 1.19967 1.13672 0.92112 0.88164 1.16410 0.77461 0.84333 0.82477 1.90813 1.50391 1.17867 1.83398 1.48426 1.67964 1.09249 1.08177 1.22801 1.00289 0.80365 0.99948 1.22047 0.97984 0.96974 0.94699 0.89651 1.21927 0.98400 1.00157 0.99982 1.22587 0.99632 0.93511 0.97072 0.89939 1.20708 0.95586 0.93004 0.86561 1.42774 1.59139 1.34300 1.04121 1.19036 1.25657 1.12150 0.80547 0.89158 1.24664 1.00239 0.98942 0.95204 1.69702 1.45931 1.37883 1.04663 0.86581 0.80185 0.82896 0.79071 1.20967 1.21724 1.20370 1.22636 1.00524 0.99344 0.77939 0.91388 0.92173 0.90357 0.88998 0.86900 0.80649 0.81660 0.90700 0.89425 0.92750 0.91148 0.92016 0.94748 0.94902 0.80718 0.93059 0.89621 0.90054 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -1.37 10.24 37.16 0.38 -0.99 16 2 C 0.09 0.80 6.24 -4.04 -0.03 0.77 16 3 N -0.40 -4.03 2.76 -112.82 -0.31 -4.34 16 4 C 0.03 0.27 11.35 -16.85 -0.19 0.08 16 5 C -0.12 -1.18 6.66 -39.94 -0.27 -1.45 16 6 Cl -0.05 -0.45 29.30 -51.86 -1.52 -1.97 16 7 C -0.14 -1.48 9.23 -39.09 -0.36 -1.84 16 8 C -0.03 -0.30 6.85 -81.98 -0.56 -0.86 16 9 C 0.60 8.62 7.85 -12.86 -0.10 8.52 16 10 O -0.55 -9.26 14.97 5.20 0.08 -9.18 16 11 N -0.61 -7.96 3.29 -171.30 -0.56 -8.53 16 12 C 0.09 0.88 5.06 -2.98 -0.02 0.87 16 13 C -0.10 -1.03 3.53 -89.25 -0.31 -1.35 16 14 H 0.09 0.81 8.14 -51.93 -0.42 0.39 16 15 C -0.15 -1.46 7.79 37.16 0.29 -1.17 16 16 C -0.11 -1.55 3.01 -88.74 -0.27 -1.81 16 17 H 0.08 1.25 8.14 -51.93 -0.42 0.83 16 18 C 0.17 3.01 4.44 -4.04 -0.02 2.99 16 19 N -0.76 -17.58 5.33 -59.91 -0.32 -17.90 16 20 C -0.24 -6.84 10.47 -15.06 -0.16 -6.99 16 21 H 0.09 2.69 8.06 -52.49 -0.42 2.27 16 22 C 0.01 0.16 5.50 -17.43 -0.10 0.06 16 23 N -0.93 -29.37 13.97 55.49 0.78 -28.59 16 24 Si 0.88 22.38 27.73 -169.99 -4.71 17.66 16 25 H -0.28 -7.18 7.11 56.52 0.40 -6.78 16 26 H -0.29 -7.46 7.11 56.52 0.40 -7.06 16 27 H -0.28 -6.66 6.52 56.52 0.37 -6.29 16 28 C 0.12 1.74 6.45 -2.13 -0.01 1.73 16 29 H 0.07 0.75 8.14 -51.93 -0.42 0.33 16 30 H 0.06 0.45 8.14 -51.93 -0.42 0.02 16 31 H 0.08 0.52 8.14 -51.93 -0.42 0.10 16 32 H 0.09 0.50 8.12 -51.93 -0.42 0.08 16 33 H 0.11 1.19 6.44 -51.93 -0.33 0.86 16 34 H 0.18 0.97 8.06 -52.48 -0.42 0.55 16 35 H 0.17 1.44 4.80 -52.49 -0.25 1.19 16 36 H 0.07 0.66 7.63 -51.93 -0.40 0.26 16 37 H 0.09 0.76 5.20 -51.93 -0.27 0.49 16 38 H 0.05 0.43 8.14 -51.93 -0.42 0.01 16 39 H 0.07 0.76 6.76 -51.93 -0.35 0.41 16 40 H 0.06 0.65 7.51 -51.93 -0.39 0.26 16 41 H 0.03 0.61 6.80 -51.93 -0.35 0.26 16 42 H 0.03 0.60 7.37 -51.93 -0.38 0.21 16 43 H 0.36 8.32 5.53 -40.82 -0.23 8.09 16 44 H 0.26 7.78 8.31 -40.82 -0.34 7.44 16 45 H 0.09 1.46 7.86 -51.93 -0.41 1.05 16 46 H 0.08 1.21 7.94 -51.93 -0.41 0.80 16 LS Contribution 377.97 15.07 5.70 5.70 Total: -1.00 -33.48 377.97 -9.34 -42.82 By element: Atomic # 1 Polarization: 12.53 SS G_CDS: -6.75 Total: 5.78 kcal Atomic # 6 Polarization: 0.27 SS G_CDS: -1.72 Total: -1.45 kcal Atomic # 7 Polarization: -58.94 SS G_CDS: -0.42 Total: -59.36 kcal Atomic # 8 Polarization: -9.26 SS G_CDS: 0.08 Total: -9.18 kcal Atomic # 14 Polarization: 22.38 SS G_CDS: -4.71 Total: 17.66 kcal Atomic # 17 Polarization: -0.45 SS G_CDS: -1.52 Total: -1.97 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -33.48 -9.34 -42.82 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001699969985.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 76.424 kcal (2) G-P(sol) polarization free energy of solvation -33.478 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.946 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.344 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.822 kcal (6) G-S(sol) free energy of system = (1) + (5) 33.602 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds