Wall clock time and date at job start Sat Apr 11 2020 05:44:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46904 * 1 3 3 C 1.46892 * 110.99946 * 2 1 4 4 C 1.50696 * 109.47376 * 66.04653 * 3 2 1 5 5 H 1.07995 * 120.00332 * 359.97438 * 4 3 2 6 6 C 1.37880 * 119.99983 * 180.02562 * 4 3 2 7 7 N 1.31517 * 120.00210 * 359.97438 * 6 4 3 8 8 Si 1.86800 * 120.00019 * 179.97438 * 6 4 3 9 9 H 1.48503 * 109.46845 * 269.99914 * 8 6 4 10 10 H 1.48503 * 109.47399 * 29.99403 * 8 6 4 11 11 H 1.48498 * 109.47295 * 150.00010 * 8 6 4 12 12 C 1.46903 * 110.99942 * 236.04137 * 2 1 3 13 13 C 1.52997 * 109.47204 * 293.95577 * 12 2 1 14 14 H 1.09000 * 109.47329 * 60.00158 * 13 12 2 15 15 O 1.42901 * 109.47164 * 300.00149 * 13 12 2 16 16 C 1.53005 * 109.47001 * 180.02562 * 13 12 2 17 17 N 1.46897 * 109.47073 * 184.99862 * 16 13 12 18 18 C 1.46894 * 111.00103 * 179.97438 * 17 16 13 19 19 H 1.09002 * 110.63238 * 328.11277 * 18 17 16 20 20 C 1.55143 * 110.70618 * 91.40287 * 18 17 16 21 21 C 1.54907 * 101.65751 * 154.03679 * 20 18 17 22 22 N 1.47845 * 104.79371 * 322.93389 * 21 20 18 23 23 C 1.46894 * 111.00293 * 146.36387 * 22 21 20 24 24 C 1.53000 * 109.47522 * 69.15166 * 23 22 21 25 25 F 1.39899 * 109.46965 * 59.99882 * 24 23 22 26 26 F 1.39897 * 109.47416 * 180.02562 * 24 23 22 27 27 F 1.39900 * 109.47045 * 300.00589 * 24 23 22 28 28 C 1.47444 * 108.56869 * 24.09220 * 22 21 20 29 29 H 1.08997 * 109.46796 * 60.00547 * 1 2 3 30 30 H 1.09001 * 109.46973 * 180.02562 * 1 2 3 31 31 H 1.09002 * 109.47257 * 300.00164 * 1 2 3 32 32 H 1.09004 * 109.47048 * 306.03985 * 3 2 1 33 33 H 1.09010 * 109.47057 * 186.04452 * 3 2 1 34 34 H 0.97000 * 119.99462 * 359.97438 * 7 6 4 35 35 H 1.09000 * 109.46866 * 53.95955 * 12 2 1 36 36 H 1.09000 * 109.46849 * 173.95441 * 12 2 1 37 37 H 0.96700 * 114.00044 * 299.99744 * 15 13 12 38 38 H 1.08998 * 109.46775 * 305.00009 * 16 13 12 39 39 H 1.09003 * 109.46938 * 64.99996 * 16 13 12 40 40 H 1.00900 * 110.99970 * 303.95661 * 17 16 13 41 41 H 1.09002 * 110.98926 * 272.13176 * 20 18 17 42 42 H 1.09002 * 110.98733 * 35.94172 * 20 18 17 43 43 H 1.08993 * 110.37279 * 204.10158 * 21 20 18 44 44 H 1.08999 * 110.46232 * 81.80326 * 21 20 18 45 45 H 1.08997 * 109.47534 * 189.15387 * 23 22 21 46 46 H 1.09003 * 109.46968 * 309.15140 * 23 22 21 47 47 H 1.09002 * 109.88724 * 239.60288 * 28 22 21 48 48 H 1.08997 * 110.02114 * 118.49574 * 28 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.6370 2.0471 1.2984 5 1 1.0740 1.5116 2.0484 6 6 2.0268 3.3495 1.5284 7 7 2.7120 4.0019 0.6148 8 14 1.5819 4.1873 3.1375 9 1 0.2694 4.8674 2.9951 10 1 1.4984 3.1719 4.2179 11 1 2.6238 5.1888 3.4789 12 6 1.9955 -0.7661 -1.1375 13 6 1.6315 -2.2427 -0.9702 14 1 0.5472 -2.3476 -0.9322 15 8 2.2008 -2.7392 0.2428 16 6 2.1803 -3.0406 -2.1547 17 7 1.7299 -4.4354 -2.0563 18 6 2.2384 -5.2333 -3.1799 19 1 2.3308 -4.6197 -4.0760 20 6 3.5971 -5.8885 -2.8169 21 6 3.6049 -7.1282 -3.7457 22 7 2.2006 -7.5898 -3.7709 23 6 1.8565 -8.1576 -5.0813 24 6 2.6058 -9.4770 -5.2782 25 9 2.2405 -10.3756 -4.2701 26 9 2.2786 -10.0174 -6.5264 27 9 3.9840 -9.2440 -5.2181 28 6 1.3255 -6.4493 -3.4430 29 1 -0.3633 0.5137 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3634 0.5139 0.8900 32 1 1.5612 1.9272 -0.8310 33 1 3.0798 1.3443 -0.1082 34 1 2.9433 3.5666 -0.2206 35 1 1.5612 -0.3873 -2.0628 36 1 3.0798 -0.6612 -1.1756 37 1 3.1652 -2.6772 0.2789 38 1 1.8161 -2.6060 -3.0856 39 1 3.2698 -3.0088 -2.1406 40 1 1.9999 -4.8411 -1.1728 41 1 4.4269 -5.2211 -3.0495 42 1 3.6193 -6.1859 -1.7684 43 1 4.2522 -7.9042 -3.3373 44 1 3.9314 -6.8513 -4.7481 45 1 0.7828 -8.3391 -5.1281 46 1 2.1411 -7.4574 -5.8667 47 1 0.7416 -6.6746 -2.5506 48 1 0.6585 -6.2384 -4.2788 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000519386523.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 05:44:37 Heat of formation + Delta-G solvation = -192.626953 kcal Electronic energy + Delta-G solvation = -29721.465464 eV Core-core repulsion = 25010.179101 eV Total energy + Delta-G solvation = -4711.286363 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 339.187 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -50.48407 -48.04997 -47.90917 -39.88007 -38.29807 -36.09414 -35.07553 -32.76580 -32.19873 -29.93808 -29.16212 -27.56533 -26.79886 -25.38688 -23.65212 -23.32129 -21.78984 -21.59436 -21.10941 -20.37482 -18.96429 -18.85286 -18.06691 -16.84572 -16.75773 -16.22680 -16.05133 -15.88363 -15.16168 -14.91330 -14.78371 -14.64833 -14.53220 -14.44739 -14.36597 -14.10887 -14.06901 -13.94508 -13.68821 -13.55703 -13.28944 -13.11605 -12.73977 -12.60196 -12.38320 -12.15056 -11.88556 -11.75400 -11.66174 -11.37975 -11.32846 -11.25070 -10.94310 -10.78100 -10.65596 -10.28697 -10.09895 -9.76859 -9.11108 -8.67768 -8.65405 -8.38879 -7.32266 -6.38240 -4.06689 2.24990 2.99844 3.35300 3.43847 3.48273 3.56820 3.64243 3.70377 3.92252 4.17041 4.19308 4.47237 4.52252 4.56683 4.60274 4.65105 4.77520 4.81639 4.92035 5.04735 5.08112 5.17645 5.30199 5.37599 5.38433 5.47048 5.52288 5.56969 5.62051 5.64130 5.92099 6.08245 6.16157 6.17798 6.21457 6.29491 6.67839 6.70744 6.94718 7.05927 7.11395 7.73934 7.87847 7.97649 8.30578 8.58854 8.85932 9.63867 11.00888 Molecular weight = 339.19amu Principal moments of inertia in cm(-1) A = 0.042352 B = 0.001553 C = 0.001546 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 660.968298 B =18023.236446 C =18106.713584 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.038 3.962 2 N -0.522 5.522 3 C 0.182 3.818 4 C -0.586 4.586 5 H 0.058 0.942 6 C 0.012 3.988 7 N -0.916 5.916 8 Si 1.075 2.925 9 H -0.289 1.289 10 H -0.287 1.287 11 H -0.285 1.285 12 C 0.023 3.977 13 C 0.114 3.886 14 H 0.104 0.896 15 O -0.545 6.545 16 C 0.029 3.971 17 N -0.673 5.673 18 C 0.068 3.932 19 H 0.084 0.916 20 C -0.160 4.160 21 C 0.037 3.963 22 N -0.523 5.523 23 C 0.004 3.996 24 C 0.458 3.542 25 F -0.173 7.173 26 F -0.185 7.185 27 F -0.184 7.184 28 C 0.054 3.946 29 H 0.008 0.992 30 H 0.050 0.950 31 H 0.074 0.926 32 H -0.022 1.022 33 H 0.018 0.982 34 H 0.265 0.735 35 H 0.028 0.972 36 H 0.067 0.933 37 H 0.367 0.633 38 H 0.077 0.923 39 H 0.034 0.966 40 H 0.354 0.646 41 H 0.077 0.923 42 H 0.082 0.918 43 H 0.089 0.911 44 H 0.054 0.946 45 H 0.121 0.879 46 H 0.082 0.918 47 H 0.097 0.903 48 H 0.063 0.937 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.166 -26.658 -14.548 30.369 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 N -0.246 5.246 3 C 0.057 3.943 4 C -0.624 4.624 5 H 0.077 0.923 6 C -0.191 4.191 7 N -0.553 5.553 8 Si 0.904 3.096 9 H -0.215 1.215 10 H -0.213 1.213 11 H -0.210 1.210 12 C -0.107 4.107 13 C 0.054 3.946 14 H 0.122 0.878 15 O -0.348 6.348 16 C -0.101 4.101 17 N -0.305 5.305 18 C -0.043 4.043 19 H 0.102 0.898 20 C -0.199 4.199 21 C -0.091 4.091 22 N -0.248 5.248 23 C -0.127 4.127 24 C 0.403 3.597 25 F -0.154 7.154 26 F -0.167 7.167 27 F -0.166 7.166 28 C -0.073 4.073 29 H 0.027 0.973 30 H 0.068 0.932 31 H 0.093 0.907 32 H -0.004 1.004 33 H 0.036 0.964 34 H 0.076 0.924 35 H 0.046 0.954 36 H 0.085 0.915 37 H 0.213 0.787 38 H 0.096 0.904 39 H 0.052 0.948 40 H 0.174 0.826 41 H 0.095 0.905 42 H 0.101 0.899 43 H 0.107 0.893 44 H 0.073 0.927 45 H 0.139 0.861 46 H 0.100 0.900 47 H 0.115 0.885 48 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges -0.838 -25.859 -13.046 28.976 hybrid contribution 1.407 -0.576 -2.448 2.882 sum 0.569 -26.435 -15.494 30.646 Atomic orbital electron populations 1.22243 0.88581 0.99452 1.00754 1.61937 1.07135 1.16573 1.38967 1.19858 0.94504 0.83006 0.96971 1.22003 1.38632 0.99642 1.02168 0.92329 1.25879 0.94441 0.94748 1.04016 1.70781 1.36735 1.39906 1.07848 0.83449 0.76289 0.75518 0.74385 1.21540 1.21309 1.21048 1.22730 1.00280 0.94168 0.93507 1.21974 0.99083 0.90722 0.82816 0.87791 1.86612 1.24887 1.84804 1.38535 1.22716 0.97746 0.89153 1.00476 1.60327 1.62886 1.01936 1.05319 1.22804 0.91955 0.94251 0.95329 0.89789 1.23466 0.98790 0.96806 1.00876 1.23245 0.89150 0.97319 0.99358 1.63574 1.04356 1.31886 1.24984 1.23464 1.02311 0.92537 0.94349 1.20445 0.77933 0.87727 0.73614 1.93213 1.91258 1.70389 1.60579 1.93192 1.92434 1.87892 1.43160 1.93178 1.32866 1.94496 1.96014 1.22834 0.94740 0.87211 1.02531 0.97311 0.93175 0.90679 1.00399 0.96442 0.92440 0.95376 0.91453 0.78653 0.90421 0.94821 0.82591 0.90469 0.89890 0.89318 0.92736 0.86111 0.90019 0.88473 0.91803 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.76 9.16 60.07 0.55 1.31 16 2 N -0.52 -11.22 4.62 -244.37 -1.13 -12.35 16 3 C 0.18 4.72 4.03 -4.98 -0.02 4.70 16 4 C -0.59 -16.75 8.52 -34.44 -0.29 -17.04 16 5 H 0.06 1.69 7.10 -52.49 -0.37 1.32 16 6 C 0.01 0.36 5.46 -17.82 -0.10 0.26 16 7 N -0.92 -27.94 13.65 55.43 0.76 -27.18 16 8 Si 1.08 25.48 29.90 -169.99 -5.08 20.39 16 9 H -0.29 -6.57 7.11 56.52 0.40 -6.17 16 10 H -0.29 -6.52 7.11 56.52 0.40 -6.12 16 11 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 12 C 0.02 0.38 4.62 -3.82 -0.02 0.36 16 13 C 0.11 1.53 3.08 -26.73 -0.08 1.44 16 14 H 0.10 1.52 6.47 -51.93 -0.34 1.18 16 15 O -0.54 -7.82 12.72 -35.23 -0.45 -8.27 16 16 C 0.03 0.29 5.22 -3.82 -0.02 0.27 16 17 N -0.67 -6.09 6.31 -104.81 -0.66 -6.75 16 18 C 0.07 0.50 3.27 -65.89 -0.22 0.28 16 19 H 0.08 0.61 7.82 -51.93 -0.41 0.20 16 20 C -0.16 -1.07 6.66 -24.59 -0.16 -1.24 16 21 C 0.04 0.25 5.09 -2.30 -0.01 0.23 16 22 N -0.52 -3.61 5.09 -231.26 -1.18 -4.78 16 23 C 0.00 0.02 4.69 -3.83 -0.02 0.00 16 24 C 0.46 3.27 3.26 37.16 0.12 3.39 16 25 F -0.17 -1.54 17.24 2.25 0.04 -1.50 16 26 F -0.19 -1.38 17.32 2.25 0.04 -1.35 16 27 F -0.18 -1.47 14.70 2.25 0.03 -1.44 16 28 C 0.05 0.37 6.61 -2.84 -0.02 0.35 16 29 H 0.01 0.17 8.14 -51.93 -0.42 -0.26 16 30 H 0.05 0.86 6.30 -51.93 -0.33 0.54 16 31 H 0.07 1.62 6.86 -51.93 -0.36 1.27 16 32 H -0.02 -0.59 7.99 -51.93 -0.41 -1.00 16 33 H 0.02 0.47 7.80 -51.92 -0.40 0.07 16 34 H 0.27 8.06 7.22 -40.82 -0.29 7.76 16 35 H 0.03 0.46 8.12 -51.93 -0.42 0.04 16 36 H 0.07 1.10 7.93 -51.93 -0.41 0.69 16 37 H 0.37 4.28 9.04 45.56 0.41 4.70 16 38 H 0.08 0.77 8.08 -51.93 -0.42 0.35 16 39 H 0.03 0.32 8.14 -51.93 -0.42 -0.10 16 40 H 0.35 3.34 7.77 -39.29 -0.31 3.04 16 41 H 0.08 0.50 8.14 -51.93 -0.42 0.08 16 42 H 0.08 0.60 7.77 -51.93 -0.40 0.20 16 43 H 0.09 0.65 7.52 -51.93 -0.39 0.26 16 44 H 0.05 0.33 7.35 -51.93 -0.38 -0.05 16 45 H 0.12 0.48 8.03 -51.93 -0.42 0.06 16 46 H 0.08 0.33 7.85 -51.93 -0.41 -0.07 16 47 H 0.10 0.76 8.03 -51.93 -0.42 0.35 16 48 H 0.06 0.37 7.56 -51.93 -0.39 -0.02 16 LS Contribution 389.58 15.07 5.87 5.87 Total: -1.00 -32.05 389.58 -8.98 -41.03 By element: Atomic # 1 Polarization: 8.93 SS G_CDS: -6.93 Total: 1.99 kcal Atomic # 6 Polarization: -5.39 SS G_CDS: -0.29 Total: -5.67 kcal Atomic # 7 Polarization: -48.86 SS G_CDS: -2.21 Total: -51.07 kcal Atomic # 8 Polarization: -7.82 SS G_CDS: -0.45 Total: -8.27 kcal Atomic # 9 Polarization: -4.39 SS G_CDS: 0.11 Total: -4.28 kcal Atomic # 14 Polarization: 25.48 SS G_CDS: -5.08 Total: 20.39 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -32.05 -8.98 -41.03 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000519386523.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -151.597 kcal (2) G-P(sol) polarization free energy of solvation -32.051 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -183.648 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.979 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.030 kcal (6) G-S(sol) free energy of system = (1) + (5) -192.627 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds