Wall clock time and date at job start Sat Apr 11 2020 05:55:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.37824 * 119.91735 * 2 1 4 4 C 1.39665 * 119.88746 * 180.02562 * 3 2 1 5 5 C 1.47645 * 120.12727 * 179.97438 * 4 3 2 6 6 O 1.21573 * 120.00138 * 180.02562 * 5 4 3 7 7 N 1.34780 * 120.00191 * 0.02562 * 5 4 3 8 8 C 1.46498 * 120.00262 * 179.97438 * 7 5 4 9 9 H 1.09003 * 109.47141 * 324.99757 * 8 7 5 10 10 C 1.52997 * 109.47253 * 85.00069 * 8 7 5 11 11 C 1.53001 * 109.46941 * 205.00080 * 8 7 5 12 12 C 1.53950 * 113.73912 * 161.81967 * 11 8 7 13 13 N 1.47808 * 86.03549 * 222.08478 * 12 11 8 14 14 C 1.36940 * 134.45133 * 204.65038 * 13 12 11 15 15 H 1.08008 * 119.99583 * 179.86793 * 14 13 12 16 16 C 1.38804 * 120.00391 * 359.86237 * 14 13 12 17 17 N 1.31619 * 120.00136 * 0.02562 * 16 14 13 18 18 Si 1.86805 * 120.00113 * 180.02562 * 16 14 13 19 19 H 1.48499 * 109.47190 * 89.99893 * 18 16 14 20 20 H 1.48496 * 109.47180 * 209.99810 * 18 16 14 21 21 H 1.48497 * 109.47106 * 329.99994 * 18 16 14 22 22 C 1.47579 * 91.05280 * 24.54884 * 13 12 11 23 23 C 1.39808 * 119.74058 * 0.25689 * 4 3 2 24 24 Cl 1.73603 * 120.07316 * 179.74517 * 23 4 3 25 25 C 1.37986 * 119.84592 * 359.48494 * 23 4 3 26 26 C 1.38606 * 120.10437 * 0.54116 * 25 23 4 27 27 F 1.35095 * 119.87249 * 179.71941 * 26 25 23 28 28 H 1.08994 * 109.47442 * 90.00131 * 1 2 3 29 29 H 1.09008 * 109.46714 * 210.00243 * 1 2 3 30 30 H 1.09003 * 109.47205 * 329.99349 * 1 2 3 31 31 H 1.07994 * 120.05870 * 0.02562 * 3 2 1 32 32 H 0.96999 * 119.99338 * 0.02562 * 7 5 4 33 33 H 1.09000 * 109.47050 * 300.07476 * 10 8 7 34 34 H 1.08997 * 109.46966 * 60.07229 * 10 8 7 35 35 H 1.08994 * 109.47188 * 180.02562 * 10 8 7 36 36 H 1.08997 * 112.94514 * 293.41298 * 11 8 7 37 37 H 1.08999 * 113.76941 * 336.35251 * 12 11 8 38 38 H 1.09006 * 113.76310 * 107.74619 * 12 11 8 39 39 H 0.96998 * 120.00043 * 180.02562 * 17 16 14 40 40 H 1.08994 * 113.76944 * 221.15114 * 22 13 12 41 41 H 1.08999 * 113.86548 * 89.76829 * 22 13 12 42 42 H 1.07995 * 119.94864 * 180.27598 * 25 23 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1944 1.1946 0.0000 4 6 3.5911 1.1939 -0.0005 5 6 4.3328 2.4705 -0.0011 6 8 5.5485 2.4672 -0.0021 7 7 3.6621 3.6396 -0.0006 8 6 4.3981 4.9063 -0.0006 9 1 5.3087 4.7974 0.5885 10 6 4.7624 5.2844 -1.4376 11 6 3.5241 6.0039 0.6096 12 6 4.3147 7.2434 1.0665 13 7 3.4490 7.2271 2.2644 14 6 3.0406 8.1740 3.1654 15 1 2.3841 7.8988 3.9777 16 6 3.4704 9.4873 3.0349 17 7 4.2702 9.8228 2.0448 18 14 2.9139 10.7788 4.2645 19 1 3.8783 10.8368 5.3922 20 1 2.8526 12.1039 3.5970 21 1 1.5683 10.4224 4.7818 22 6 3.1997 5.7820 2.0981 23 6 4.2840 -0.0204 -0.0065 24 17 6.0199 -0.0314 -0.0139 25 6 3.5849 -1.2101 -0.0011 26 6 2.1988 -1.2019 -0.0011 27 9 1.5191 -2.3694 -0.0015 28 1 -0.3634 0.0000 -1.0276 29 1 -0.3633 -0.8900 0.5139 30 1 -0.3634 0.8899 0.5139 31 1 1.6540 2.1296 0.0004 32 1 2.6921 3.6422 0.0005 33 1 5.3840 4.5019 -1.8728 34 1 3.8518 5.3946 -2.0263 35 1 5.3104 6.2266 -1.4376 36 1 2.6514 6.2398 0.0007 37 1 5.3642 7.0409 1.2800 38 1 4.1694 8.1162 0.4298 39 1 4.5708 10.7405 1.9538 40 1 2.1661 5.4903 2.2837 41 1 3.9200 5.1479 2.6149 42 1 4.1184 -2.1490 -0.0012 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000970811457.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Apr 11 2020 05:55:52 Heat of formation + Delta-G solvation = -5.477256 kcal Electronic energy + Delta-G solvation = -26705.000931 eV Core-core repulsion = 22627.383832 eV Total energy + Delta-G solvation = -4077.617100 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 340.109 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -49.45132 -40.49936 -38.96382 -37.86078 -36.70494 -34.85575 -33.10166 -32.40439 -31.68706 -29.91652 -27.48549 -27.33345 -25.01614 -24.40965 -23.83518 -22.74589 -21.13881 -20.39451 -19.22570 -18.27619 -17.55457 -17.26120 -16.72486 -16.25624 -15.82960 -15.19485 -15.00573 -14.81309 -14.69885 -14.17854 -14.02496 -13.85471 -13.79046 -13.52807 -13.40114 -13.24222 -12.92713 -12.50955 -12.30848 -12.05945 -11.76461 -11.62649 -11.43917 -11.36861 -11.29405 -11.20071 -10.89442 -10.66453 -10.36586 -9.98140 -9.82911 -9.54476 -9.46370 -9.41406 -9.03582 -8.82510 -8.78240 -6.88152 -5.77397 -3.09525 0.19808 0.55023 1.80786 2.47092 3.10422 3.36798 3.38683 3.43391 3.45393 3.67496 4.09450 4.19761 4.36971 4.44670 4.65718 4.88284 5.01591 5.09771 5.15421 5.16189 5.27581 5.31342 5.39542 5.51606 5.54122 5.57297 5.64325 5.70138 5.81014 5.98213 6.06542 6.15917 6.26776 6.34463 6.43850 6.56280 6.61758 6.78222 7.21757 7.35252 7.53819 7.56372 7.97660 8.23503 9.04155 9.70447 10.59421 11.39844 Molecular weight = 340.11amu Principal moments of inertia in cm(-1) A = 0.016495 B = 0.002543 C = 0.002339 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1697.107260 B =11007.117243 C =11967.914345 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.122 4.122 3 C -0.048 4.048 4 C -0.129 4.129 5 C 0.551 3.449 6 O -0.514 6.514 7 N -0.712 5.712 8 C 0.152 3.848 9 H 0.090 0.910 10 C -0.158 4.158 11 C -0.148 4.148 12 C 0.176 3.824 13 N -0.612 5.612 14 C -0.224 4.224 15 H 0.079 0.921 16 C -0.008 4.008 17 N -0.921 5.921 18 Si 0.911 3.089 19 H -0.289 1.289 20 H -0.290 1.290 21 H -0.281 1.281 22 C 0.125 3.875 23 C 0.033 3.967 24 Cl -0.016 7.016 25 C -0.154 4.154 26 C 0.131 3.869 27 F -0.128 7.128 28 H 0.079 0.921 29 H 0.073 0.927 30 H 0.079 0.921 31 H 0.147 0.853 32 H 0.396 0.604 33 H 0.054 0.946 34 H 0.053 0.947 35 H 0.071 0.929 36 H 0.089 0.911 37 H 0.028 0.972 38 H 0.075 0.925 39 H 0.254 0.746 40 H 0.040 0.960 41 H 0.033 0.967 42 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.511 -22.872 -8.576 25.041 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.123 4.123 3 C -0.067 4.067 4 C -0.134 4.134 5 C 0.337 3.663 6 O -0.391 6.391 7 N -0.363 5.363 8 C 0.048 3.952 9 H 0.108 0.892 10 C -0.216 4.216 11 C -0.168 4.168 12 C 0.050 3.950 13 N -0.338 5.338 14 C -0.351 4.351 15 H 0.097 0.903 16 C -0.204 4.204 17 N -0.568 5.568 18 Si 0.742 3.258 19 H -0.216 1.216 20 H -0.216 1.216 21 H -0.206 1.206 22 C -0.001 4.001 23 C 0.005 3.995 24 Cl 0.014 6.986 25 C -0.174 4.174 26 C 0.111 3.889 27 F -0.106 7.106 28 H 0.097 0.903 29 H 0.092 0.908 30 H 0.098 0.902 31 H 0.165 0.835 32 H 0.230 0.770 33 H 0.073 0.927 34 H 0.072 0.928 35 H 0.090 0.910 36 H 0.107 0.893 37 H 0.046 0.954 38 H 0.093 0.907 39 H 0.064 0.936 40 H 0.058 0.942 41 H 0.050 0.950 42 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -4.510 -22.546 -8.429 24.489 hybrid contribution -0.624 0.423 0.778 1.083 sum -5.134 -22.123 -7.651 23.965 Atomic orbital electron populations 1.20787 0.89081 1.04061 1.03355 1.19953 0.97778 0.91374 1.03220 1.21104 0.92003 0.98082 0.95476 1.19971 0.93553 0.93584 1.06250 1.17904 0.87450 0.83300 0.77660 1.90880 1.12626 1.87051 1.48499 1.46060 1.10181 1.05654 1.74422 1.21153 0.95880 0.81281 0.96917 0.89207 1.22107 1.01463 1.02002 0.96036 1.23868 0.99853 0.96663 0.96373 1.22228 0.92201 0.92880 0.87672 1.45988 1.54603 1.02214 1.31021 1.19021 1.23601 0.87451 1.05042 0.90327 1.24776 0.99766 0.97137 0.98762 1.69804 1.37506 1.17762 1.31753 0.86133 0.78125 0.81198 0.80378 1.21629 1.21616 1.20646 1.22534 0.97793 0.87896 0.91882 1.20687 0.87385 0.92591 0.98879 1.98445 1.05714 1.98654 1.95802 1.20945 0.92323 0.98757 1.05331 1.17485 0.89177 0.81279 1.00983 1.91524 1.79756 1.45883 1.93426 0.90272 0.90801 0.90201 0.83503 0.76958 0.92701 0.92785 0.91018 0.89321 0.95375 0.90681 0.93618 0.94213 0.94983 0.83077 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.65 9.83 36.01 0.35 -0.29 16 2 C -0.12 -0.95 5.88 -104.61 -0.62 -1.57 16 3 C -0.05 -0.39 9.18 -39.20 -0.36 -0.75 16 4 C -0.13 -1.42 5.88 -104.94 -0.62 -2.04 16 5 C 0.55 7.40 7.73 -12.42 -0.10 7.30 16 6 O -0.51 -8.53 13.63 5.30 0.07 -8.46 16 7 N -0.71 -8.69 4.89 -54.81 -0.27 -8.96 16 8 C 0.15 2.23 2.29 -67.93 -0.16 2.08 16 9 H 0.09 1.54 7.48 -51.93 -0.39 1.15 16 10 C -0.16 -2.13 9.44 37.16 0.35 -1.78 16 11 C -0.15 -2.53 3.35 -89.69 -0.30 -2.83 16 12 C 0.18 4.00 6.98 -2.84 -0.02 3.98 16 13 N -0.61 -15.47 3.70 -177.71 -0.66 -16.13 16 14 C -0.22 -6.25 10.70 -15.06 -0.16 -6.41 16 15 H 0.08 2.12 7.83 -52.48 -0.41 1.71 16 16 C -0.01 -0.22 5.50 -17.43 -0.10 -0.32 16 17 N -0.92 -27.12 11.39 55.49 0.63 -26.49 16 18 Si 0.91 22.05 29.55 -169.99 -5.02 17.03 16 19 H -0.29 -7.01 7.11 56.52 0.40 -6.61 16 20 H -0.29 -7.05 7.11 56.52 0.40 -6.65 16 21 H -0.28 -6.59 7.11 56.52 0.40 -6.18 16 22 C 0.13 2.45 8.38 -2.97 -0.02 2.43 16 23 C 0.03 0.36 6.35 -39.09 -0.25 0.11 16 24 Cl -0.02 -0.20 26.02 -51.86 -1.35 -1.54 16 25 C -0.15 -1.38 9.79 -39.54 -0.39 -1.77 16 26 C 0.13 1.13 7.25 -39.28 -0.28 0.84 16 27 F -0.13 -1.11 16.46 2.25 0.04 -1.07 16 28 H 0.08 0.37 8.14 -51.93 -0.42 -0.05 16 29 H 0.07 0.41 7.63 -51.92 -0.40 0.01 16 30 H 0.08 0.36 8.08 -51.93 -0.42 -0.06 16 31 H 0.15 0.87 6.40 -52.49 -0.34 0.53 16 32 H 0.40 3.77 6.63 -40.82 -0.27 3.50 16 33 H 0.05 0.75 8.14 -51.93 -0.42 0.33 16 34 H 0.05 0.65 8.14 -51.93 -0.42 0.23 16 35 H 0.07 1.00 8.09 -51.93 -0.42 0.58 16 36 H 0.09 1.45 8.14 -51.93 -0.42 1.03 16 37 H 0.03 0.67 8.03 -51.93 -0.42 0.25 16 38 H 0.07 1.88 7.17 -51.93 -0.37 1.51 16 39 H 0.25 7.25 8.31 -40.82 -0.34 6.91 16 40 H 0.04 0.72 8.14 -51.93 -0.42 0.30 16 41 H 0.03 0.64 8.10 -51.93 -0.42 0.22 16 42 H 0.15 1.08 8.06 -52.49 -0.42 0.66 16 LS Contribution 367.99 15.07 5.55 5.55 Total: -1.00 -32.53 367.99 -9.20 -41.73 By element: Atomic # 1 Polarization: 4.89 SS G_CDS: -5.52 Total: -0.63 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: -2.66 Total: -1.02 kcal Atomic # 7 Polarization: -51.29 SS G_CDS: -0.29 Total: -51.58 kcal Atomic # 8 Polarization: -8.53 SS G_CDS: 0.07 Total: -8.46 kcal Atomic # 9 Polarization: -1.11 SS G_CDS: 0.04 Total: -1.07 kcal Atomic # 14 Polarization: 22.05 SS G_CDS: -5.02 Total: 17.03 kcal Atomic # 17 Polarization: -0.20 SS G_CDS: -1.35 Total: -1.54 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -32.53 -9.20 -41.73 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000970811457.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.253 kcal (2) G-P(sol) polarization free energy of solvation -32.534 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.719 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.196 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.731 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.477 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds